EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSORLG00015016560 (Gene tree)
Gene ID
-
Gene Symbol
smarca4a
Alias
-
Full Name
SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4
Gene Type
protein_coding
Species
Oryzias_latipes_hsok
Status
putative
Strand
Plus strand
Length
14721 bases
Position
chr8:22062602-22077322
Accession
101163329
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00015015514ResIIIPF04851.156.5e-0911
ENSORLP00015015553ResIIIPF04851.151.3e-0811
ENSORLP00015015514BRKPF07533.161.2e-1611
ENSORLP00015015553BRKPF07533.161.9e-1611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00015023671-5687XM_023957991ENSORLP000150155531621 (aa)XP_023813759-
ENSORLT00015033922-3078-ENSORLP000150155141025 (aa)--
ENSORLT00015023445-522-ENSORLP00015031919173 (aa)--
Gene Model
Click here to download ENSORLG00015016560's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015016560's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSORLG00015016560smarca4a9983.657ENSORLG00015007739-9582.817
ENSORLG00015016560smarca4a9873.997ENSORLG00015006289SMARCA29570.487
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00015016560smarca4a10086.028ENSG00000127616SMARCA49995.652Homo_sapiens
ENSORLG00015016560smarca4a7691.968ENSAPOG00000003509smarca4a9889.691Acanthochromis_polyacanthus
ENSORLG00015016560smarca4a9583.531ENSAPOG00000004542SMARCA49683.894Acanthochromis_polyacanthus
ENSORLG00015016560smarca4a9884.339ENSAMEG00000010868SMARCA410081.904Ailuropoda_melanoleuca
ENSORLG00015016560smarca4a9883.118ENSACIG00000003035-9384.802Amphilophus_citrinellus
ENSORLG00015016560smarca4a9993.599ENSACIG00000021550smarca4a9893.723Amphilophus_citrinellus
ENSORLG00015016560smarca4a9886.010ENSAOCG00000009450-9485.821Amphiprion_ocellaris
ENSORLG00015016560smarca4a9890.354ENSAOCG00000019167smarca4a10089.247Amphiprion_ocellaris
ENSORLG00015016560smarca4a9890.354ENSAPEG00000015559smarca4a10089.384Amphiprion_percula
ENSORLG00015016560smarca4a9981.059ENSAPEG00000023108-9781.010Amphiprion_percula
ENSORLG00015016560smarca4a9984.114ENSATEG00000001094-9483.914Anabas_testudineus
ENSORLG00015016560smarca4a10092.826ENSATEG00000011524smarca4a10092.888Anabas_testudineus
ENSORLG00015016560smarca4a9985.811ENSANAG00000036991SMARCA410082.939Aotus_nancymaae
ENSORLG00015016560smarca4a9993.009ENSACLG00000000163smarca4a9892.509Astatotilapia_calliptera
ENSORLG00015016560smarca4a9584.253ENSACLG00000008638-9583.322Astatotilapia_calliptera
ENSORLG00015016560smarca4a9884.915ENSAMXG00000021023smarca4a9584.967Astyanax_mexicanus
ENSORLG00015016560smarca4a9884.981ENSAMXG00000011238-9485.792Astyanax_mexicanus
ENSORLG00015016560smarca4a10086.152ENSBTAG00000019220SMARCA49686.268Bos_taurus
ENSORLG00015016560smarca4a9787.416ENSCJAG00000005936SMARCA49782.017Callithrix_jacchus
ENSORLG00015016560smarca4a10085.854ENSCAFG00000017584SMARCA410085.906Canis_familiaris
ENSORLG00015016560smarca4a10085.854ENSCAFG00020024620SMARCA49985.906Canis_lupus_dingo
ENSORLG00015016560smarca4a10082.436ENSCHIG00000015318SMARCA49682.540Capra_hircus
ENSORLG00015016560smarca4a10086.389ENSTSYG00000012966SMARCA410086.327Carlito_syrichta
ENSORLG00015016560smarca4a9877.559ENSCAPG00000015932SMARCA49488.735Cavia_aperea
ENSORLG00015016560smarca4a10085.915ENSCPOG00000015549SMARCA410086.028Cavia_porcellus
ENSORLG00015016560smarca4a10083.010ENSCCAG00000031660SMARCA49983.242Cebus_capucinus
ENSORLG00015016560smarca4a10085.976ENSCATG00000029530SMARCA410086.028Cercocebus_atys
ENSORLG00015016560smarca4a10086.205ENSCLAG00000011946SMARCA410086.319Chinchilla_lanigera
ENSORLG00015016560smarca4a10085.592ENSCPBG00000009994SMARCA410085.575Chrysemys_picta_bellii
ENSORLG00015016560smarca4a10085.915ENSCANG00000036013SMARCA410085.967Colobus_angolensis_palliatus
ENSORLG00015016560smarca4a10085.671ENSCGRG00001016732Smarca410085.714Cricetulus_griseus_chok1gshd
ENSORLG00015016560smarca4a10085.671ENSCGRG00000017242Smarca410085.714Cricetulus_griseus_crigri
ENSORLG00015016560smarca4a9692.122ENSCSEG00000014771smarca4a9691.868Cynoglossus_semilaevis
ENSORLG00015016560smarca4a9993.254ENSCVAG00000006979smarca4a9993.192Cyprinodon_variegatus
ENSORLG00015016560smarca4a9886.391ENSCVAG00000003018-9483.688Cyprinodon_variegatus
ENSORLG00015016560smarca4a9283.753ENSDARG00000104339SMARCA49483.600Danio_rerio
ENSORLG00015016560smarca4a10088.699ENSDARG00000077226smarca4a10088.332Danio_rerio
ENSORLG00015016560smarca4a10078.383ENSDNOG00000048847SMARCA49090.141Dasypus_novemcinctus
ENSORLG00015016560smarca4a9876.265ENSDORG00000002544Smarca48780.696Dipodomys_ordii
ENSORLG00015016560smarca4a9475.415ENSETEG00000013361SMARCA49474.952Echinops_telfairi
ENSORLG00015016560smarca4a10085.854ENSEASG00005006167SMARCA410084.409Equus_asinus_asinus
ENSORLG00015016560smarca4a10085.915ENSECAG00000008334SMARCA410085.845Equus_caballus
ENSORLG00015016560smarca4a10089.078ENSELUG00000010247smarca4a9788.098Esox_lucius
ENSORLG00015016560smarca4a9979.056ENSELUG00000023232-9682.310Esox_lucius
ENSORLG00015016560smarca4a10085.697ENSFCAG00000004894SMARCA410085.749Felis_catus
ENSORLG00015016560smarca4a9280.252ENSFALG00000004208SMARCA49283.895Ficedula_albicollis
ENSORLG00015016560smarca4a9884.211ENSFDAG00000012237SMARCA49785.952Fukomys_damarensis
ENSORLG00015016560smarca4a9692.405ENSFHEG00000010182smarca4a10092.369Fundulus_heteroclitus
ENSORLG00015016560smarca4a10084.349ENSFHEG00000007902-9781.774Fundulus_heteroclitus
ENSORLG00015016560smarca4a8886.521ENSGMOG00000005756-8779.174Gadus_morhua
ENSORLG00015016560smarca4a8993.220ENSGMOG00000002649smarca4a9486.905Gadus_morhua
ENSORLG00015016560smarca4a9883.902ENSGALG00000047145SMARCA410085.191Gallus_gallus
ENSORLG00015016560smarca4a9981.056ENSGAFG00000008827-9481.048Gambusia_affinis
ENSORLG00015016560smarca4a9190.713ENSGAFG00000014900smarca4a10091.723Gambusia_affinis
ENSORLG00015016560smarca4a9892.038ENSGACG00000006691smarca4a9791.746Gasterosteus_aculeatus
ENSORLG00015016560smarca4a10079.728ENSGACG00000016033-9779.018Gasterosteus_aculeatus
ENSORLG00015016560smarca4a10085.810ENSGAGG00000016757SMARCA49685.778Gopherus_agassizii
ENSORLG00015016560smarca4a10085.976ENSGGOG00000009882SMARCA410086.028Gorilla_gorilla
ENSORLG00015016560smarca4a10093.566ENSHBUG00000021172smarca4a10093.199Haplochromis_burtoni
ENSORLG00015016560smarca4a10084.264ENSHBUG00000005447-9683.416Haplochromis_burtoni
ENSORLG00015016560smarca4a10085.246ENSHGLG00000010519SMARCA410085.289Heterocephalus_glaber_female
ENSORLG00015016560smarca4a10084.957ENSHGLG00100013774SMARCA410084.878Heterocephalus_glaber_male
ENSORLG00015016560smarca4a9889.894ENSHCOG00000009510smarca4a9692.719Hippocampus_comes
ENSORLG00015016560smarca4a10088.354ENSIPUG00000006107smarca4a10088.372Ictalurus_punctatus
ENSORLG00015016560smarca4a9884.934ENSIPUG00000016346-9783.344Ictalurus_punctatus
ENSORLG00015016560smarca4a10085.732ENSSTOG00000007939SMARCA410085.784Ictidomys_tridecemlineatus
ENSORLG00015016560smarca4a10084.160ENSJJAG00000012877Smarca410083.603Jaculus_jaculus
ENSORLG00015016560smarca4a9886.319ENSKMAG00000019518-9486.327Kryptolebias_marmoratus
ENSORLG00015016560smarca4a10093.403ENSKMAG00000011931smarca4a9693.223Kryptolebias_marmoratus
ENSORLG00015016560smarca4a9981.791ENSLBEG00000020655-9481.464Labrus_bergylta
ENSORLG00015016560smarca4a9889.020ENSLBEG00000017383smarca4a9788.254Labrus_bergylta
ENSORLG00015016560smarca4a8082.048ENSLACG00000015309SMARCA410081.785Latimeria_chalumnae
ENSORLG00015016560smarca4a10085.399ENSLOCG00000007820smarca4a9984.845Lepisosteus_oculatus
ENSORLG00015016560smarca4a10085.758ENSLAFG00000001433SMARCA410085.801Loxodonta_africana
ENSORLG00015016560smarca4a10085.976ENSMFAG00000032146SMARCA49986.028Macaca_fascicularis
ENSORLG00015016560smarca4a10085.976ENSMMUG00000012042SMARCA49591.173Macaca_mulatta
ENSORLG00015016560smarca4a10085.958ENSMNEG00000028512SMARCA410086.011Macaca_nemestrina
ENSORLG00015016560smarca4a10085.976ENSMLEG00000034976SMARCA410085.871Mandrillus_leucophaeus
ENSORLG00015016560smarca4a10093.317ENSMAMG00000009256smarca4a10093.562Mastacembelus_armatus
ENSORLG00015016560smarca4a9885.842ENSMAMG00000002841-9486.367Mastacembelus_armatus
ENSORLG00015016560smarca4a9884.896ENSMZEG00005023861-9484.055Maylandia_zebra
ENSORLG00015016560smarca4a10093.448ENSMZEG00005003889smarca4a10093.080Maylandia_zebra
ENSORLG00015016560smarca4a10085.453ENSMAUG00000020731Smarca410085.375Mesocricetus_auratus
ENSORLG00015016560smarca4a10085.758ENSMICG00000009806SMARCA410085.810Microcebus_murinus
ENSORLG00015016560smarca4a10085.514ENSMOCG00000022209Smarca410085.558Microtus_ochrogaster
ENSORLG00015016560smarca4a9890.646ENSMMOG00000007571smarca4a9890.651Mola_mola
ENSORLG00015016560smarca4a9981.813ENSMMOG00000008466-9580.789Mola_mola
ENSORLG00015016560smarca4a10084.721ENSMODG00000006287SMARCA49683.903Monodelphis_domestica
ENSORLG00015016560smarca4a9881.496ENSMALG00000021534-9682.714Monopterus_albus
ENSORLG00015016560smarca4a9891.124ENSMALG00000003388smarca4a10092.529Monopterus_albus
ENSORLG00015016560smarca4a10085.784MGP_CAROLIEiJ_G0031879Smarca410085.828Mus_caroli
ENSORLG00015016560smarca4a10085.784ENSMUSG00000032187Smarca410085.828Mus_musculus
ENSORLG00015016560smarca4a10086.222MGP_PahariEiJ_G0014745Smarca410086.205Mus_pahari
ENSORLG00015016560smarca4a10085.784MGP_SPRETEiJ_G0033003Smarca410085.828Mus_spretus
ENSORLG00015016560smarca4a10085.854ENSMPUG00000005711SMARCA410085.906Mustela_putorius_furo
ENSORLG00015016560smarca4a10086.280ENSMLUG00000004491-10085.775Myotis_lucifugus
ENSORLG00015016560smarca4a10086.116ENSNGAG00000021852Smarca410085.872Nannospalax_galili
ENSORLG00015016560smarca4a9881.657ENSNBRG00000018865-9683.716Neolamprologus_brichardi
ENSORLG00015016560smarca4a9889.764ENSNBRG00000011457smarca4a9689.297Neolamprologus_brichardi
ENSORLG00015016560smarca4a9884.630ENSNLEG00000012389SMARCA49483.622Nomascus_leucogenys
ENSORLG00015016560smarca4a8089.655ENSOPRG00000000885-7989.655Ochotona_princeps
ENSORLG00015016560smarca4a10084.214ENSODEG00000017127SMARCA49683.470Octodon_degus
ENSORLG00015016560smarca4a10084.444ENSONIG00000018040-9783.666Oreochromis_niloticus
ENSORLG00015016560smarca4a10093.566ENSONIG00000008196smarca4a10093.260Oreochromis_niloticus
ENSORLG00015016560smarca4a9979.888ENSOCUG00000001787SMARCA49880.075Oryctolagus_cuniculus
ENSORLG00015016560smarca4a9583.889ENSORLG00000003955-9582.776Oryzias_latipes
ENSORLG00015016560smarca4a10099.753ENSORLG00000015452smarca4a10099.753Oryzias_latipes
ENSORLG00015016560smarca4a9583.711ENSORLG00020009728-9879.931Oryzias_latipes_hni
ENSORLG00015016560smarca4a10099.753ENSORLG00020004611smarca4a10099.753Oryzias_latipes_hni
ENSORLG00015016560smarca4a10097.224ENSOMEG00000007486smarca4a10097.224Oryzias_melastigma
ENSORLG00015016560smarca4a9783.861ENSOMEG00000016626-9583.081Oryzias_melastigma
ENSORLG00015016560smarca4a9884.854ENSOGAG00000016148SMARCA410084.469Otolemur_garnettii
ENSORLG00015016560smarca4a10085.609ENSOARG00000017454SMARCA49786.014Ovis_aries
ENSORLG00015016560smarca4a10085.976ENSPPAG00000043191SMARCA410086.028Pan_paniscus
ENSORLG00015016560smarca4a10085.697ENSPPRG00000000064SMARCA410085.749Panthera_pardus
ENSORLG00015016560smarca4a7985.973ENSPTIG00000017447SMARCA410079.832Panthera_tigris_altaica
ENSORLG00015016560smarca4a10085.976ENSPTRG00000010488SMARCA410086.028Pan_troglodytes
ENSORLG00015016560smarca4a10086.081ENSPANG00000011042SMARCA49986.133Papio_anubis
ENSORLG00015016560smarca4a10088.020ENSPKIG00000007770SMARCA49688.135Paramormyrops_kingsleyae
ENSORLG00015016560smarca4a10085.442ENSPKIG00000010087-9784.968Paramormyrops_kingsleyae
ENSORLG00015016560smarca4a10080.670ENSPSIG00000005547SMARCA410080.397Pelodiscus_sinensis
ENSORLG00015016560smarca4a10085.575ENSPEMG00000020389Smarca410085.619Peromyscus_maniculatus_bairdii
ENSORLG00015016560smarca4a10086.316ENSPCIG00000017138SMARCA49686.113Phascolarctos_cinereus
ENSORLG00015016560smarca4a9880.168ENSPFOG00000012930-9683.881Poecilia_formosa
ENSORLG00015016560smarca4a10090.654ENSPFOG00000007892smarca4a10091.570Poecilia_formosa
ENSORLG00015016560smarca4a9883.691ENSPLAG00000018616-9585.023Poecilia_latipinna
ENSORLG00015016560smarca4a10090.593ENSPLAG00000014294smarca4a10091.509Poecilia_latipinna
ENSORLG00015016560smarca4a9585.344ENSPMEG00000008929-9584.067Poecilia_mexicana
ENSORLG00015016560smarca4a9591.131ENSPMEG00000003725smarca4a9792.095Poecilia_mexicana
ENSORLG00015016560smarca4a10090.438ENSPREG00000014608smarca4a10090.987Poecilia_reticulata
ENSORLG00015016560smarca4a9979.913ENSPREG00000014823-9384.204Poecilia_reticulata
ENSORLG00015016560smarca4a10083.981ENSPPYG00000009568SMARCA410083.792Pongo_abelii
ENSORLG00015016560smarca4a9871.206ENSPCAG00000014054SMARCA47590.840Procavia_capensis
ENSORLG00015016560smarca4a10085.854ENSPCOG00000023011SMARCA410085.740Propithecus_coquereli
ENSORLG00015016560smarca4a9579.279ENSPVAG00000007787SMARCA49679.385Pteropus_vampyrus
ENSORLG00015016560smarca4a9882.324ENSPNYG00000023995-9484.331Pundamilia_nyererei
ENSORLG00015016560smarca4a9990.194ENSPNYG00000000717smarca4a9693.363Pundamilia_nyererei
ENSORLG00015016560smarca4a9884.348ENSPNAG00000006636-9385.762Pygocentrus_nattereri
ENSORLG00015016560smarca4a9884.320ENSPNAG00000024136smarca4a9785.066Pygocentrus_nattereri
ENSORLG00015016560smarca4a10085.784ENSRNOG00000009271Smarca410085.828Rattus_norvegicus
ENSORLG00015016560smarca4a10085.915ENSRBIG00000038696SMARCA49985.967Rhinopithecus_bieti
ENSORLG00015016560smarca4a10085.915ENSRROG00000045509SMARCA410085.967Rhinopithecus_roxellana
ENSORLG00015016560smarca4a10085.723ENSSBOG00000026896SMARCA49689.408Saimiri_boliviensis_boliviensis
ENSORLG00015016560smarca4a10086.316ENSSHAG00000001642SMARCA49686.113Sarcophilus_harrisii
ENSORLG00015016560smarca4a9989.715ENSSFOG00015013823smarca49989.467Scleropages_formosus
ENSORLG00015016560smarca4a9684.217ENSSFOG00015009921-9289.978Scleropages_formosus
ENSORLG00015016560smarca4a10092.462ENSSMAG00000003200smarca4a10092.097Scophthalmus_maximus
ENSORLG00015016560smarca4a10081.628ENSSMAG00000014082-9681.068Scophthalmus_maximus
ENSORLG00015016560smarca4a9892.567ENSSDUG00000017298smarca4a10088.365Seriola_dumerili
ENSORLG00015016560smarca4a9985.954ENSSDUG00000005388-9284.738Seriola_dumerili
ENSORLG00015016560smarca4a10093.187ENSSLDG00000024486smarca4a10092.762Seriola_lalandi_dorsalis
ENSORLG00015016560smarca4a9885.884ENSSLDG00000023663-9386.212Seriola_lalandi_dorsalis
ENSORLG00015016560smarca4a6296.273ENSSARG00000013477SMARCA48196.273Sorex_araneus
ENSORLG00015016560smarca4a9882.049ENSSPUG00000004558SMARCA49882.353Sphenodon_punctatus
ENSORLG00015016560smarca4a10083.155ENSSPAG00000012533-9780.984Stegastes_partitus
ENSORLG00015016560smarca4a10092.701ENSSPAG00000004248smarca4a10092.214Stegastes_partitus
ENSORLG00015016560smarca4a10085.758ENSSSCG00000013629SMARCA410085.810Sus_scrofa
ENSORLG00015016560smarca4a5489.922ENSTGUG00000015488-9883.929Taeniopygia_guttata
ENSORLG00015016560smarca4a9885.189ENSTRUG00000004885smarca4a10085.167Takifugu_rubripes
ENSORLG00015016560smarca4a9583.280ENSTRUG00000001378SMARCA49483.047Takifugu_rubripes
ENSORLG00015016560smarca4a8885.963ENSTNIG00000004859-10092.171Tetraodon_nigroviridis
ENSORLG00015016560smarca4a10082.630ENSTNIG00000004536SMARCA49682.308Tetraodon_nigroviridis
ENSORLG00015016560smarca4a58100.000ENSTBEG00000000707-52100.000Tupaia_belangeri
ENSORLG00015016560smarca4a10083.064ENSTTRG00000009519SMARCA410082.754Tursiops_truncatus
ENSORLG00015016560smarca4a10085.915ENSUAMG00000014661SMARCA410085.967Ursus_americanus
ENSORLG00015016560smarca4a9881.460ENSUMAG00000022005SMARCA49790.491Ursus_maritimus
ENSORLG00015016560smarca4a10085.854ENSVVUG00000017820SMARCA49785.906Vulpes_vulpes
ENSORLG00015016560smarca4a9984.051ENSXETG00000009355smarca49483.921Xenopus_tropicalis
ENSORLG00015016560smarca4a9983.105ENSXCOG00000013494-9482.513Xiphophorus_couchianus
ENSORLG00015016560smarca4a9983.292ENSXMAG00000007030-9683.915Xiphophorus_maculatus
ENSORLG00015016560smarca4a10090.876ENSXMAG00000006321smarca4a10091.672Xiphophorus_maculatus

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