EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015016592 (Gene tree)
Gene ID: -
Gene Symbol: ssb
Alias: -
Full Name: Sjogren syndrome antigen B (autoantigen La)
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 9631 bases
Position: chr21:22781586-22791216
Accession: ZDB-GENE-030131-223
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015032024	RRM_1	PF00076.22	2.8e-10	1	1
ENSORLP00015032024	RRM_3	PF08777.11	4e-28	1	1
ENSORLP00015032024	La	PF05383.17	1.5e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015023660	-	4321	-	ENSORLP00015032024	400 (aa)	-	-

Gene Model

Click here to download ENSORLG00015016592's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015016592's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015016592	ssb	100	57.457	ENSG00000138385	SSB	98	68.644	Homo_sapiens
ENSORLG00015016592	ssb	100	82.250	ENSAPOG00000003448	ssb	100	82.250	Acanthochromis_polyacanthus
ENSORLG00015016592	ssb	100	55.370	ENSAMEG00000010507	SSB	99	55.370	Ailuropoda_melanoleuca
ENSORLG00015016592	ssb	93	80.429	ENSACIG00000001738	ssb	97	79.893	Amphilophus_citrinellus
ENSORLG00015016592	ssb	100	82.500	ENSAOCG00000020398	ssb	100	82.500	Amphiprion_ocellaris
ENSORLG00015016592	ssb	100	83.000	ENSAPEG00000020395	ssb	100	83.000	Amphiprion_percula
ENSORLG00015016592	ssb	100	83.000	ENSATEG00000016884	ssb	100	83.000	Anabas_testudineus
ENSORLG00015016592	ssb	100	53.428	ENSAPLG00000006109	SSB	99	54.028	Anas_platyrhynchos
ENSORLG00015016592	ssb	100	55.961	ENSACAG00000017008	SSB	99	55.961	Anolis_carolinensis
ENSORLG00015016592	ssb	100	53.448	ENSANAG00000027195	-	99	51.834	Aotus_nancymaae
ENSORLG00015016592	ssb	100	76.808	ENSACLG00000010798	ssb	100	76.309	Astatotilapia_calliptera
ENSORLG00015016592	ssb	100	60.976	ENSAMXG00000012606	ssb	100	61.951	Astyanax_mexicanus
ENSORLG00015016592	ssb	100	58.025	ENSBTAG00000008716	SSB	99	57.778	Bos_taurus
ENSORLG00015016592	ssb	75	33.660	WBGene00016653	C44E4.4	76	34.314	Caenorhabditis_elegans
ENSORLG00015016592	ssb	100	58.128	ENSCJAG00000045073	SSB	99	57.882	Callithrix_jacchus
ENSORLG00015016592	ssb	100	57.494	ENSCAFG00000012418	SSB	99	57.248	Canis_familiaris
ENSORLG00015016592	ssb	100	57.494	ENSCAFG00020002900	SSB	99	57.248	Canis_lupus_dingo
ENSORLG00015016592	ssb	100	54.074	ENSCHIG00000022196	-	99	53.580	Capra_hircus
ENSORLG00015016592	ssb	100	57.389	ENSCHIG00000022624	-	99	57.143	Capra_hircus
ENSORLG00015016592	ssb	99	57.284	ENSTSYG00000000097	SSB	99	57.037	Carlito_syrichta
ENSORLG00015016592	ssb	100	58.128	ENSCPOG00000003338	SSB	99	57.882	Cavia_porcellus
ENSORLG00015016592	ssb	100	58.867	ENSCCAG00000035147	SSB	99	58.621	Cebus_capucinus
ENSORLG00015016592	ssb	72	54.296	ENSCATG00000036701	SSB	83	53.952	Cercocebus_atys
ENSORLG00015016592	ssb	99	43.890	ENSCATG00000042909	-	98	43.392	Cercocebus_atys
ENSORLG00015016592	ssb	100	57.635	ENSCLAG00000015617	-	99	57.389	Chinchilla_lanigera
ENSORLG00015016592	ssb	97	53.846	ENSCSAG00000018390	-	97	53.590	Chlorocebus_sabaeus
ENSORLG00015016592	ssb	100	58.128	ENSCSAG00000015200	SSB	88	57.882	Chlorocebus_sabaeus
ENSORLG00015016592	ssb	100	57.389	ENSCHOG00000007763	SSB	99	57.143	Choloepus_hoffmanni
ENSORLG00015016592	ssb	100	58.780	ENSCPBG00000006519	SSB	99	59.268	Chrysemys_picta_bellii
ENSORLG00015016592	ssb	100	51.111	ENSCANG00000033240	-	99	50.864	Colobus_angolensis_palliatus
ENSORLG00015016592	ssb	100	58.128	ENSCANG00000027695	SSB	99	57.882	Colobus_angolensis_palliatus
ENSORLG00015016592	ssb	96	46.234	ENSCANG00000028838	-	91	45.974	Colobus_angolensis_palliatus
ENSORLG00015016592	ssb	100	53.071	ENSCGRG00001024831	Ssb	99	53.317	Cricetulus_griseus_chok1gshd
ENSORLG00015016592	ssb	100	53.071	ENSCGRG00000005387	Ssb	99	53.317	Cricetulus_griseus_crigri
ENSORLG00015016592	ssb	99	80.653	ENSCSEG00000011599	ssb	99	80.653	Cynoglossus_semilaevis
ENSORLG00015016592	ssb	100	78.554	ENSCVAG00000021558	ssb	100	82.544	Cyprinodon_variegatus
ENSORLG00015016592	ssb	100	62.222	ENSDARG00000029252	ssb	100	62.222	Danio_rerio
ENSORLG00015016592	ssb	100	58.128	ENSDNOG00000013450	SSB	99	57.882	Dasypus_novemcinctus
ENSORLG00015016592	ssb	100	52.899	ENSDORG00000005543	Ssb	99	53.808	Dipodomys_ordii
ENSORLG00015016592	ssb	85	33.613	FBgn0011638	La	77	35.331	Drosophila_melanogaster
ENSORLG00015016592	ssb	51	61.881	ENSETEG00000004614	-	52	61.881	Echinops_telfairi
ENSORLG00015016592	ssb	99	44.361	ENSEBUG00000001237	ssb	96	45.038	Eptatretus_burgeri
ENSORLG00015016592	ssb	100	58.128	ENSEASG00005022835	SSB	99	57.882	Equus_asinus_asinus
ENSORLG00015016592	ssb	100	58.128	ENSECAG00000018495	SSB	99	57.882	Equus_caballus
ENSORLG00015016592	ssb	76	49.675	ENSEEUG00000008077	SSB	78	49.675	Erinaceus_europaeus
ENSORLG00015016592	ssb	100	68.317	ENSELUG00000020929	ssb	100	66.832	Esox_lucius
ENSORLG00015016592	ssb	100	58.722	ENSFCAG00000011601	SSB	99	58.477	Felis_catus
ENSORLG00015016592	ssb	99	56.020	ENSFALG00000000930	SSB	99	56.265	Ficedula_albicollis
ENSORLG00015016592	ssb	100	57.882	ENSFDAG00000000598	SSB	99	57.635	Fukomys_damarensis
ENSORLG00015016592	ssb	74	74.172	ENSFHEG00000003268	ssb	95	75.974	Fundulus_heteroclitus
ENSORLG00015016592	ssb	99	70.398	ENSGMOG00000002664	ssb	100	70.398	Gadus_morhua
ENSORLG00015016592	ssb	99	57.108	ENSGALG00000009677	SSB	99	55.882	Gallus_gallus
ENSORLG00015016592	ssb	100	81.390	ENSGAFG00000002749	ssb	100	81.390	Gambusia_affinis
ENSORLG00015016592	ssb	100	77.094	ENSGACG00000005107	ssb	100	77.094	Gasterosteus_aculeatus
ENSORLG00015016592	ssb	100	58.293	ENSGAGG00000007807	SSB	99	58.780	Gopherus_agassizii
ENSORLG00015016592	ssb	100	49.754	ENSGGOG00000024891	-	99	49.507	Gorilla_gorilla
ENSORLG00015016592	ssb	54	52.941	ENSGGOG00000023471	-	89	52.489	Gorilla_gorilla
ENSORLG00015016592	ssb	100	76.808	ENSHBUG00000006584	ssb	100	76.309	Haplochromis_burtoni
ENSORLG00015016592	ssb	100	57.282	ENSHGLG00000017580	-	99	56.934	Heterocephalus_glaber_female
ENSORLG00015016592	ssb	100	51.843	ENSHGLG00000004478	-	99	51.597	Heterocephalus_glaber_female
ENSORLG00015016592	ssb	100	52.605	ENSHGLG00000005832	-	99	52.357	Heterocephalus_glaber_female
ENSORLG00015016592	ssb	100	57.282	ENSHGLG00100003084	-	99	56.934	Heterocephalus_glaber_male
ENSORLG00015016592	ssb	100	52.228	ENSHGLG00100008767	-	99	51.861	Heterocephalus_glaber_male
ENSORLG00015016592	ssb	99	74.242	ENSHCOG00000019011	ssb	99	75.253	Hippocampus_comes
ENSORLG00015016592	ssb	100	63.504	ENSIPUG00000003681	SSB	100	62.530	Ictalurus_punctatus
ENSORLG00015016592	ssb	100	57.635	ENSSTOG00000008416	SSB	99	56.897	Ictidomys_tridecemlineatus
ENSORLG00015016592	ssb	89	47.486	ENSJJAG00000016250	-	94	47.486	Jaculus_jaculus
ENSORLG00015016592	ssb	100	51.190	ENSJJAG00000023158	-	99	51.190	Jaculus_jaculus
ENSORLG00015016592	ssb	100	81.000	ENSKMAG00000017317	ssb	100	81.000	Kryptolebias_marmoratus
ENSORLG00015016592	ssb	100	80.250	ENSLBEG00000017345	ssb	100	80.250	Labrus_bergylta
ENSORLG00015016592	ssb	100	53.790	ENSLACG00000014056	SSB	99	54.034	Latimeria_chalumnae
ENSORLG00015016592	ssb	100	63.391	ENSLOCG00000007933	ssb	99	63.636	Lepisosteus_oculatus
ENSORLG00015016592	ssb	74	45.118	ENSLAFG00000026721	-	97	45.118	Loxodonta_africana
ENSORLG00015016592	ssb	100	49.877	ENSLAFG00000028909	-	99	48.889	Loxodonta_africana
ENSORLG00015016592	ssb	100	53.444	ENSLAFG00000000867	-	99	54.157	Loxodonta_africana
ENSORLG00015016592	ssb	90	50.970	ENSMFAG00000041478	-	91	53.191	Macaca_fascicularis
ENSORLG00015016592	ssb	100	58.128	ENSMFAG00000039066	SSB	99	57.882	Macaca_fascicularis
ENSORLG00015016592	ssb	100	50.739	ENSMMUG00000011724	-	97	50.246	Macaca_mulatta
ENSORLG00015016592	ssb	99	42.394	ENSMMUG00000039889	-	98	42.145	Macaca_mulatta
ENSORLG00015016592	ssb	100	58.128	ENSMMUG00000023051	SSB	99	57.882	Macaca_mulatta
ENSORLG00015016592	ssb	100	49.268	ENSMNEG00000028321	SSB	85	67.826	Macaca_nemestrina
ENSORLG00015016592	ssb	90	50.970	ENSMNEG00000034698	-	91	53.191	Macaca_nemestrina
ENSORLG00015016592	ssb	100	40.988	ENSMLEG00000042644	-	99	40.494	Mandrillus_leucophaeus
ENSORLG00015016592	ssb	100	58.128	ENSMLEG00000035717	SSB	99	57.882	Mandrillus_leucophaeus
ENSORLG00015016592	ssb	100	81.750	ENSMAMG00000004800	ssb	100	81.750	Mastacembelus_armatus
ENSORLG00015016592	ssb	100	76.808	ENSMZEG00005005749	ssb	100	76.309	Maylandia_zebra
ENSORLG00015016592	ssb	99	56.863	ENSMGAG00000010328	SSB	95	62.437	Meleagris_gallopavo
ENSORLG00015016592	ssb	100	58.128	ENSMICG00000028252	-	99	57.882	Microcebus_murinus
ENSORLG00015016592	ssb	98	53.418	ENSMICG00000033304	-	95	55.851	Microcebus_murinus
ENSORLG00015016592	ssb	100	48.395	ENSMODG00000019271	-	99	47.901	Monodelphis_domestica
ENSORLG00015016592	ssb	100	46.552	ENSMODG00000007027	-	99	46.552	Monodelphis_domestica
ENSORLG00015016592	ssb	100	55.231	ENSMODG00000008227	-	99	55.231	Monodelphis_domestica
ENSORLG00015016592	ssb	91	76.839	ENSMALG00000008045	ssb	90	79.200	Monopterus_albus
ENSORLG00015016592	ssb	100	52.998	MGP_CAROLIEiJ_G0023629	-	98	64.103	Mus_caroli
ENSORLG00015016592	ssb	100	53.237	ENSMUSG00000068882	Ssb	98	64.103	Mus_musculus
ENSORLG00015016592	ssb	100	53.110	MGP_PahariEiJ_G0025081	-	98	63.462	Mus_pahari
ENSORLG00015016592	ssb	100	53.237	MGP_SPRETEiJ_G0024551	Ssb	98	64.103	Mus_spretus
ENSORLG00015016592	ssb	100	57.882	ENSMPUG00000000785	SSB	99	57.635	Mustela_putorius_furo
ENSORLG00015016592	ssb	100	57.108	ENSMLUG00000016316	SSB	99	56.867	Myotis_lucifugus
ENSORLG00015016592	ssb	100	76.559	ENSNBRG00000012661	ssb	100	76.060	Neolamprologus_brichardi
ENSORLG00015016592	ssb	85	46.939	ENSNLEG00000028754	-	78	47.892	Nomascus_leucogenys
ENSORLG00015016592	ssb	100	57.882	ENSNLEG00000004958	SSB	99	57.635	Nomascus_leucogenys
ENSORLG00015016592	ssb	62	61.600	ENSMEUG00000001650	-	100	61.600	Notamacropus_eugenii
ENSORLG00015016592	ssb	51	58.599	ENSOPRG00000008475	-	54	58.599	Ochotona_princeps
ENSORLG00015016592	ssb	94	56.267	ENSODEG00000004202	-	99	56.000	Octodon_degus
ENSORLG00015016592	ssb	100	78.554	ENSONIG00000008776	ssb	100	78.055	Oreochromis_niloticus
ENSORLG00015016592	ssb	100	56.158	ENSOANG00000008543	SSB	99	56.158	Ornithorhynchus_anatinus
ENSORLG00015016592	ssb	100	57.635	ENSOCUG00000010396	SSB	99	57.389	Oryctolagus_cuniculus
ENSORLG00015016592	ssb	100	99.250	ENSORLG00000017208	ssb	100	99.250	Oryzias_latipes
ENSORLG00015016592	ssb	100	99.002	ENSORLG00020022574	ssb	100	99.002	Oryzias_latipes_hni
ENSORLG00015016592	ssb	100	86.284	ENSOMEG00000003193	ssb	100	88.529	Oryzias_melastigma
ENSORLG00015016592	ssb	100	53.682	ENSOGAG00000029768	SSB	99	53.444	Otolemur_garnettii
ENSORLG00015016592	ssb	100	57.389	ENSOARG00000002906	SSB	99	57.143	Ovis_aries
ENSORLG00015016592	ssb	100	49.754	ENSPPAG00000032427	-	100	60.465	Pan_paniscus
ENSORLG00015016592	ssb	87	50.286	ENSPPAG00000006189	-	89	49.429	Pan_paniscus
ENSORLG00015016592	ssb	100	57.457	ENSPPAG00000042673	SSB	99	57.213	Pan_paniscus
ENSORLG00015016592	ssb	100	58.722	ENSPPRG00000006599	SSB	99	58.477	Panthera_pardus
ENSORLG00015016592	ssb	100	58.722	ENSPTIG00000011021	SSB	97	58.477	Panthera_tigris_altaica
ENSORLG00015016592	ssb	100	48.030	ENSPTRG00000042880	-	99	47.783	Pan_troglodytes
ENSORLG00015016592	ssb	100	57.457	ENSPTRG00000012620	SSB	99	57.213	Pan_troglodytes
ENSORLG00015016592	ssb	99	42.145	ENSPANG00000034126	-	77	45.566	Papio_anubis
ENSORLG00015016592	ssb	97	41.026	ENSPANG00000031877	-	91	39.948	Papio_anubis
ENSORLG00015016592	ssb	100	58.128	ENSPANG00000007440	SSB	99	57.882	Papio_anubis
ENSORLG00015016592	ssb	100	66.667	ENSPKIG00000019325	ssb	99	66.667	Paramormyrops_kingsleyae
ENSORLG00015016592	ssb	100	58.780	ENSPSIG00000002265	SSB	93	59.268	Pelodiscus_sinensis
ENSORLG00015016592	ssb	80	71.160	ENSPMGG00000020075	ssb	92	66.384	Periophthalmus_magnuspinnatus
ENSORLG00015016592	ssb	81	45.566	ENSPMAG00000002982	ssb	89	45.596	Petromyzon_marinus
ENSORLG00015016592	ssb	95	57.662	ENSPCIG00000028591	-	99	56.897	Phascolarctos_cinereus
ENSORLG00015016592	ssb	100	81.250	ENSPFOG00000009650	ssb	100	81.250	Poecilia_formosa
ENSORLG00015016592	ssb	100	81.250	ENSPLAG00000020498	ssb	100	81.250	Poecilia_latipinna
ENSORLG00015016592	ssb	100	81.000	ENSPMEG00000001051	ssb	100	81.000	Poecilia_mexicana
ENSORLG00015016592	ssb	93	82.527	ENSPREG00000003708	ssb	97	82.527	Poecilia_reticulata
ENSORLG00015016592	ssb	100	57.882	ENSPPYG00000012919	SSB	99	57.635	Pongo_abelii
ENSORLG00015016592	ssb	95	55.729	ENSPCAG00000010276	SSB	99	55.729	Procavia_capensis
ENSORLG00015016592	ssb	100	51.724	ENSPCOG00000023189	-	99	51.478	Propithecus_coquereli
ENSORLG00015016592	ssb	100	55.911	ENSPCOG00000015741	-	92	65.517	Propithecus_coquereli
ENSORLG00015016592	ssb	89	58.939	ENSPVAG00000006615	SSB	100	58.659	Pteropus_vampyrus
ENSORLG00015016592	ssb	100	76.808	ENSPNYG00000006444	ssb	100	76.309	Pundamilia_nyererei
ENSORLG00015016592	ssb	100	62.439	ENSPNAG00000011708	ssb	100	61.463	Pygocentrus_nattereri
ENSORLG00015016592	ssb	100	53.086	ENSRNOG00000011606	AABR07061825.1	99	53.086	Rattus_norvegicus
ENSORLG00015016592	ssb	100	52.758	ENSRNOG00000007998	Ssb	99	51.196	Rattus_norvegicus
ENSORLG00015016592	ssb	94	49.868	ENSRBIG00000041232	-	98	49.604	Rhinopithecus_bieti
ENSORLG00015016592	ssb	87	54.571	ENSRBIG00000041608	-	94	52.101	Rhinopithecus_bieti
ENSORLG00015016592	ssb	99	41.791	ENSRBIG00000029918	-	98	41.542	Rhinopithecus_bieti
ENSORLG00015016592	ssb	100	50.000	ENSRBIG00000041972	SSB	88	67.826	Rhinopithecus_bieti
ENSORLG00015016592	ssb	87	56.571	ENSRROG00000034102	-	96	51.889	Rhinopithecus_roxellana
ENSORLG00015016592	ssb	100	58.128	ENSRROG00000040346	SSB	99	57.882	Rhinopithecus_roxellana
ENSORLG00015016592	ssb	99	47.512	ENSRROG00000007149	-	98	47.264	Rhinopithecus_roxellana
ENSORLG00015016592	ssb	98	50.000	ENSRROG00000031684	-	99	49.747	Rhinopithecus_roxellana
ENSORLG00015016592	ssb	50	30.476	YDL051W	LHP1	73	30.476	Saccharomyces_cerevisiae
ENSORLG00015016592	ssb	100	58.621	ENSSBOG00000027204	SSB	99	58.374	Saimiri_boliviensis_boliviensis
ENSORLG00015016592	ssb	100	56.404	ENSSHAG00000018062	SSB	99	56.897	Sarcophilus_harrisii
ENSORLG00015016592	ssb	100	65.517	ENSSFOG00015000550	ssb	99	66.256	Scleropages_formosus
ENSORLG00015016592	ssb	100	77.000	ENSSMAG00000013885	ssb	99	80.645	Scophthalmus_maximus
ENSORLG00015016592	ssb	100	83.750	ENSSDUG00000020117	ssb	100	83.750	Seriola_dumerili
ENSORLG00015016592	ssb	100	80.000	ENSSLDG00000002525	ssb	100	79.750	Seriola_lalandi_dorsalis
ENSORLG00015016592	ssb	95	52.865	ENSSARG00000007747	SSB	99	52.604	Sorex_araneus
ENSORLG00015016592	ssb	100	57.353	ENSSPUG00000012112	SSB	99	57.108	Sphenodon_punctatus
ENSORLG00015016592	ssb	100	81.000	ENSSPAG00000005696	ssb	100	81.000	Stegastes_partitus
ENSORLG00015016592	ssb	94	54.881	ENSSSCG00000015938	SSB	82	56.627	Sus_scrofa
ENSORLG00015016592	ssb	95	56.812	ENSTGUG00000007942	SSB	99	56.479	Taeniopygia_guttata
ENSORLG00015016592	ssb	100	76.500	ENSTRUG00000017839	ssb	100	78.250	Takifugu_rubripes
ENSORLG00015016592	ssb	92	76.294	ENSTNIG00000000915	ssb	91	81.790	Tetraodon_nigroviridis
ENSORLG00015016592	ssb	82	67.826	ENSTBEG00000009056	SSB	81	67.826	Tupaia_belangeri
ENSORLG00015016592	ssb	100	58.722	ENSTTRG00000002152	SSB	99	58.477	Tursiops_truncatus
ENSORLG00015016592	ssb	94	58.158	ENSUAMG00000027833	SSB	99	57.895	Ursus_americanus
ENSORLG00015016592	ssb	100	57.248	ENSUMAG00000013907	SSB	99	57.002	Ursus_maritimus
ENSORLG00015016592	ssb	100	58.416	ENSVPAG00000007183	SSB	99	58.168	Vicugna_pacos
ENSORLG00015016592	ssb	100	57.494	ENSVVUG00000016573	SSB	77	57.002	Vulpes_vulpes
ENSORLG00015016592	ssb	99	52.336	ENSXETG00000025402	ssb	99	52.103	Xenopus_tropicalis
ENSORLG00015016592	ssb	93	77.688	ENSXCOG00000019109	ssb	93	82.540	Xiphophorus_couchianus
ENSORLG00015016592	ssb	100	79.404	ENSXMAG00000004888	ssb	100	79.653	Xiphophorus_maculatus