EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015016656 (Gene tree)
Gene ID: -
Gene Symbol: slbp
Alias: -
Full Name: stem-loop binding protein
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 5758 bases
Position: chr10:6756296-6762053
Accession: ZDB-GENE-030131-9686
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015015730	SLBP_RNA_bind	PF15247.6	9.5e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015034015	-	1983	-	ENSORLP00015015730	262 (aa)	-	-

Gene Model

Click here to download ENSORLG00015016656's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015016656's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015016656	slbp	89	49.372	ENSG00000163950	SLBP	82	54.808	Homo_sapiens
ENSORLG00015016656	slbp	100	63.604	ENSAPOG00000004953	slbp	100	63.604	Acanthochromis_polyacanthus
ENSORLG00015016656	slbp	61	59.375	ENSAMEG00000016915	SLBP	89	55.072	Ailuropoda_melanoleuca
ENSORLG00015016656	slbp	89	68.293	ENSACIG00000022308	slbp	94	68.293	Amphilophus_citrinellus
ENSORLG00015016656	slbp	100	62.898	ENSAOCG00000024545	slbp	100	62.898	Amphiprion_ocellaris
ENSORLG00015016656	slbp	100	63.251	ENSAPEG00000017629	slbp	100	63.251	Amphiprion_percula
ENSORLG00015016656	slbp	100	61.972	ENSATEG00000016358	slbp	100	61.972	Anabas_testudineus
ENSORLG00015016656	slbp	78	48.544	ENSAPLG00000015989	-	90	51.707	Anas_platyrhynchos
ENSORLG00015016656	slbp	89	47.967	ENSANAG00000034769	SLBP	87	53.881	Aotus_nancymaae
ENSORLG00015016656	slbp	90	63.035	ENSACLG00000007036	-	92	63.035	Astatotilapia_calliptera
ENSORLG00015016656	slbp	95	55.056	ENSAMXG00000014527	slbp	97	55.056	Astyanax_mexicanus
ENSORLG00015016656	slbp	73	54.000	ENSBTAG00000001328	SLBP	84	52.033	Bos_taurus
ENSORLG00015016656	slbp	89	48.954	ENSCJAG00000001790	SLBP	84	50.400	Callithrix_jacchus
ENSORLG00015016656	slbp	73	54.040	ENSCAFG00000015016	SLBP	71	57.426	Canis_familiaris
ENSORLG00015016656	slbp	73	54.040	ENSCAFG00020012334	SLBP	71	57.426	Canis_lupus_dingo
ENSORLG00015016656	slbp	76	53.333	ENSCHIG00000019364	SLBP	88	51.562	Capra_hircus
ENSORLG00015016656	slbp	81	49.772	ENSTSYG00000000376	SLBP	89	52.915	Carlito_syrichta
ENSORLG00015016656	slbp	63	48.795	ENSCAPG00000016340	SLBP	87	53.571	Cavia_aperea
ENSORLG00015016656	slbp	81	50.463	ENSCPOG00000000031	SLBP	82	52.500	Cavia_porcellus
ENSORLG00015016656	slbp	89	49.372	ENSCATG00000029173	SLBP	82	54.808	Cercocebus_atys
ENSORLG00015016656	slbp	72	55.208	ENSCLAG00000008157	SLBP	84	52.101	Chinchilla_lanigera
ENSORLG00015016656	slbp	88	38.494	ENSCSAG00000015628	SLBP	83	41.564	Chlorocebus_sabaeus
ENSORLG00015016656	slbp	88	48.760	ENSCPBG00000000746	SLBP	84	48.760	Chrysemys_picta_bellii
ENSORLG00015016656	slbp	77	51.485	ENSCANG00000041008	SLBP	89	54.369	Colobus_angolensis_palliatus
ENSORLG00015016656	slbp	76	52.427	ENSCGRG00001012991	-	88	50.400	Cricetulus_griseus_chok1gshd
ENSORLG00015016656	slbp	73	54.545	ENSCGRG00001009760	-	84	51.852	Cricetulus_griseus_chok1gshd
ENSORLG00015016656	slbp	73	54.545	ENSCGRG00000004506	Slbp	84	51.852	Cricetulus_griseus_crigri
ENSORLG00015016656	slbp	99	63.504	ENSCSEG00000020337	-	99	63.504	Cynoglossus_semilaevis
ENSORLG00015016656	slbp	92	67.451	ENSCVAG00000019592	-	95	68.235	Cyprinodon_variegatus
ENSORLG00015016656	slbp	91	55.469	ENSDARG00000100558	slbp	84	55.859	Danio_rerio
ENSORLG00015016656	slbp	73	52.427	ENSDNOG00000047539	SLBP	73	55.714	Dasypus_novemcinctus
ENSORLG00015016656	slbp	61	55.556	ENSDORG00000003028	Slbp	90	62.745	Dipodomys_ordii
ENSORLG00015016656	slbp	77	52.133	ENSETEG00000004641	SLBP	90	54.587	Echinops_telfairi
ENSORLG00015016656	slbp	51	57.778	ENSEASG00005022714	SLBP	91	51.351	Equus_asinus_asinus
ENSORLG00015016656	slbp	68	56.757	ENSECAG00000011689	SLBP	59	60.317	Equus_caballus
ENSORLG00015016656	slbp	94	54.307	ENSELUG00000012854	slbp	94	56.929	Esox_lucius
ENSORLG00015016656	slbp	63	58.434	ENSFCAG00000000169	SLBP	83	54.762	Felis_catus
ENSORLG00015016656	slbp	90	47.581	ENSFALG00000010003	-	87	47.581	Ficedula_albicollis
ENSORLG00015016656	slbp	65	56.471	ENSFDAG00000007592	SLBP	91	51.639	Fukomys_damarensis
ENSORLG00015016656	slbp	89	70.248	ENSFHEG00000007497	slbp	92	69.835	Fundulus_heteroclitus
ENSORLG00015016656	slbp	56	71.333	ENSGMOG00000015352	slbp	96	69.281	Gadus_morhua
ENSORLG00015016656	slbp	89	49.180	ENSGALG00000015712	SLBP	86	49.180	Gallus_gallus
ENSORLG00015016656	slbp	96	65.909	ENSGAFG00000019577	slbp	100	66.537	Gambusia_affinis
ENSORLG00015016656	slbp	91	59.200	ENSGACG00000019596	slbp	94	59.200	Gasterosteus_aculeatus
ENSORLG00015016656	slbp	73	54.187	ENSGAGG00000012096	SLBP	81	54.187	Gopherus_agassizii
ENSORLG00015016656	slbp	89	49.372	ENSGGOG00000003167	SLBP	82	54.808	Gorilla_gorilla
ENSORLG00015016656	slbp	90	63.424	ENSHBUG00000003338	-	92	63.424	Haplochromis_burtoni
ENSORLG00015016656	slbp	64	53.488	ENSHGLG00000010461	-	86	45.106	Heterocephalus_glaber_female
ENSORLG00015016656	slbp	65	50.568	ENSHGLG00000008313	-	86	44.538	Heterocephalus_glaber_female
ENSORLG00015016656	slbp	64	57.143	ENSHGLG00100014018	-	90	59.788	Heterocephalus_glaber_male
ENSORLG00015016656	slbp	80	46.977	ENSHGLG00100014906	-	86	45.532	Heterocephalus_glaber_male
ENSORLG00015016656	slbp	65	51.705	ENSHGLG00100010510	-	86	45.378	Heterocephalus_glaber_male
ENSORLG00015016656	slbp	100	61.172	ENSHCOG00000013425	slbp	100	61.172	Hippocampus_comes
ENSORLG00015016656	slbp	78	59.722	ENSIPUG00000016780	slbp	81	59.447	Ictalurus_punctatus
ENSORLG00015016656	slbp	78	53.521	ENSSTOG00000003262	SLBP	88	50.584	Ictidomys_tridecemlineatus
ENSORLG00015016656	slbp	88	50.000	ENSJJAG00000020549	-	84	52.675	Jaculus_jaculus
ENSORLG00015016656	slbp	77	54.545	ENSJJAG00000002394	-	87	52.174	Jaculus_jaculus
ENSORLG00015016656	slbp	100	63.345	ENSKMAG00000008187	slbp	100	63.345	Kryptolebias_marmoratus
ENSORLG00015016656	slbp	98	65.201	ENSLBEG00000024709	slbp	99	65.201	Labrus_bergylta
ENSORLG00015016656	slbp	93	45.113	ENSLACG00000014623	SLBP	89	47.431	Latimeria_chalumnae
ENSORLG00015016656	slbp	97	53.405	ENSLOCG00000011027	slbp	88	54.924	Lepisosteus_oculatus
ENSORLG00015016656	slbp	72	55.440	ENSLAFG00000012933	SLBP	83	57.005	Loxodonta_africana
ENSORLG00015016656	slbp	88	49.367	ENSMFAG00000030130	SLBP	71	54.237	Macaca_fascicularis
ENSORLG00015016656	slbp	89	47.967	ENSMMUG00000032303	SLBP	86	54.545	Macaca_mulatta
ENSORLG00015016656	slbp	52	46.309	ENSMNEG00000008082	SLBP	64	50.980	Macaca_nemestrina
ENSORLG00015016656	slbp	85	45.415	ENSMLEG00000024639	SLBP	84	51.092	Mandrillus_leucophaeus
ENSORLG00015016656	slbp	98	60.507	ENSMAMG00000001046	-	98	60.507	Mastacembelus_armatus
ENSORLG00015016656	slbp	90	63.424	ENSMZEG00005017261	-	92	63.424	Maylandia_zebra
ENSORLG00015016656	slbp	77	51.232	ENSMGAG00000013085	SLBP	90	51.232	Meleagris_gallopavo
ENSORLG00015016656	slbp	73	53.769	ENSMAUG00000009490	Slbp	84	51.440	Mesocricetus_auratus
ENSORLG00015016656	slbp	78	50.971	ENSMICG00000014244	SLBP	82	54.327	Microcebus_murinus
ENSORLG00015016656	slbp	73	54.545	ENSMOCG00000015826	Slbp	85	60.317	Microtus_ochrogaster
ENSORLG00015016656	slbp	92	60.976	ENSMMOG00000010181	slbp	95	60.976	Mola_mola
ENSORLG00015016656	slbp	90	46.215	ENSMODG00000004304	SLBP	92	50.000	Monodelphis_domestica
ENSORLG00015016656	slbp	99	60.915	ENSMALG00000013883	-	74	60.915	Monopterus_albus
ENSORLG00015016656	slbp	89	48.333	MGP_CAROLIEiJ_G0027117	Slbp	82	59.259	Mus_caroli
ENSORLG00015016656	slbp	88	48.319	ENSMUSG00000004642	Slbp	83	59.259	Mus_musculus
ENSORLG00015016656	slbp	88	48.319	MGP_PahariEiJ_G0016901	Slbp	82	59.259	Mus_pahari
ENSORLG00015016656	slbp	88	48.319	MGP_SPRETEiJ_G0028113	Slbp	83	59.259	Mus_spretus
ENSORLG00015016656	slbp	63	52.096	ENSMPUG00000011139	SLBP	83	56.140	Mustela_putorius_furo
ENSORLG00015016656	slbp	62	60.976	ENSMLUG00000004425	SLBP	84	55.072	Myotis_lucifugus
ENSORLG00015016656	slbp	73	53.535	ENSNGAG00000020799	Slbp	83	51.240	Nannospalax_galili
ENSORLG00015016656	slbp	81	64.348	ENSNBRG00000006044	-	87	64.348	Neolamprologus_brichardi
ENSORLG00015016656	slbp	89	47.967	ENSNLEG00000000048	SLBP	82	54.808	Nomascus_leucogenys
ENSORLG00015016656	slbp	63	56.287	ENSMEUG00000002501	SLBP	88	60.234	Notamacropus_eugenii
ENSORLG00015016656	slbp	74	54.040	ENSODEG00000012641	SLBP	86	52.301	Octodon_degus
ENSORLG00015016656	slbp	96	62.774	ENSONIG00000017469	-	97	63.869	Oreochromis_niloticus
ENSORLG00015016656	slbp	78	53.922	ENSOANG00000014243	SLBP	85	53.922	Ornithorhynchus_anatinus
ENSORLG00015016656	slbp	100	96.642	ENSORLG00000024887	-	100	96.642	Oryzias_latipes
ENSORLG00015016656	slbp	100	97.328	ENSORLG00020007798	slbp	100	97.328	Oryzias_latipes_hni
ENSORLG00015016656	slbp	100	91.985	ENSOMEG00000010818	slbp	100	91.985	Oryzias_melastigma
ENSORLG00015016656	slbp	81	50.000	ENSOGAG00000009750	SLBP	83	51.852	Otolemur_garnettii
ENSORLG00015016656	slbp	62	57.669	ENSOARG00000016090	SLBP	90	54.545	Ovis_aries
ENSORLG00015016656	slbp	89	49.791	ENSPPAG00000033300	SLBP	88	49.091	Pan_paniscus
ENSORLG00015016656	slbp	63	58.434	ENSPPRG00000016897	SLBP	92	52.066	Panthera_pardus
ENSORLG00015016656	slbp	51	58.519	ENSPTIG00000015057	SLBP	89	54.144	Panthera_tigris_altaica
ENSORLG00015016656	slbp	88	49.789	ENSPTRG00000015832	SLBP	82	54.808	Pan_troglodytes
ENSORLG00015016656	slbp	88	47.347	ENSPANG00000004932	SLBP	82	54.808	Papio_anubis
ENSORLG00015016656	slbp	97	53.506	ENSPKIG00000006183	slbp	94	54.579	Paramormyrops_kingsleyae
ENSORLG00015016656	slbp	87	60.515	ENSPMGG00000017684	-	99	64.322	Periophthalmus_magnuspinnatus
ENSORLG00015016656	slbp	73	54.545	ENSPEMG00000018369	Slbp	83	52.066	Peromyscus_maniculatus_bairdii
ENSORLG00015016656	slbp	73	50.704	ENSPCIG00000013575	SLBP	72	48.669	Phascolarctos_cinereus
ENSORLG00015016656	slbp	96	65.530	ENSPFOG00000000462	slbp	98	65.038	Poecilia_formosa
ENSORLG00015016656	slbp	96	65.414	ENSPLAG00000008300	slbp	98	64.925	Poecilia_latipinna
ENSORLG00015016656	slbp	96	65.530	ENSPMEG00000020807	slbp	98	65.038	Poecilia_mexicana
ENSORLG00015016656	slbp	96	65.909	ENSPREG00000004561	slbp	98	65.414	Poecilia_reticulata
ENSORLG00015016656	slbp	89	49.372	ENSPPYG00000014529	SLBP	83	52.263	Pongo_abelii
ENSORLG00015016656	slbp	78	51.456	ENSPCOG00000017399	SLBP	82	54.808	Propithecus_coquereli
ENSORLG00015016656	slbp	89	50.427	ENSPVAG00000002807	SLBP	83	52.720	Pteropus_vampyrus
ENSORLG00015016656	slbp	90	63.424	ENSPNYG00000005451	-	92	63.424	Pundamilia_nyererei
ENSORLG00015016656	slbp	90	54.762	ENSPNAG00000018503	slbp	92	54.762	Pygocentrus_nattereri
ENSORLG00015016656	slbp	88	48.319	ENSRNOG00000037162	Slbp	83	51.240	Rattus_norvegicus
ENSORLG00015016656	slbp	89	49.372	ENSRBIG00000039159	SLBP	82	54.808	Rhinopithecus_bieti
ENSORLG00015016656	slbp	88	49.580	ENSRROG00000030081	SLBP	85	52.263	Rhinopithecus_roxellana
ENSORLG00015016656	slbp	67	50.282	ENSSBOG00000033897	SLBP	89	53.591	Saimiri_boliviensis_boliviensis
ENSORLG00015016656	slbp	73	51.174	ENSSHAG00000013939	SLBP	84	49.049	Sarcophilus_harrisii
ENSORLG00015016656	slbp	97	54.613	ENSSFOG00015019429	slbp	98	54.613	Scleropages_formosus
ENSORLG00015016656	slbp	100	60.211	ENSSMAG00000016028	-	100	60.211	Scophthalmus_maximus
ENSORLG00015016656	slbp	96	64.684	ENSSDUG00000000855	-	97	64.684	Seriola_dumerili
ENSORLG00015016656	slbp	90	50.199	ENSSLDG00000007554	-	79	50.000	Seriola_lalandi_dorsalis
ENSORLG00015016656	slbp	52	69.863	ENSSLDG00000022893	-	87	69.863	Seriola_lalandi_dorsalis
ENSORLG00015016656	slbp	89	49.583	ENSSPUG00000016007	SLBP	88	53.279	Sphenodon_punctatus
ENSORLG00015016656	slbp	98	64.621	ENSSPAG00000004021	slbp	94	69.008	Stegastes_partitus
ENSORLG00015016656	slbp	73	54.040	ENSSSCG00000008676	SLBP	71	57.426	Sus_scrofa
ENSORLG00015016656	slbp	90	48.988	ENSTGUG00000010626	-	92	48.988	Taeniopygia_guttata
ENSORLG00015016656	slbp	98	64.945	ENSTRUG00000000688	slbp	98	64.945	Takifugu_rubripes
ENSORLG00015016656	slbp	88	64.979	ENSTNIG00000000484	-	96	64.135	Tetraodon_nigroviridis
ENSORLG00015016656	slbp	61	59.375	ENSTTRG00000010901	-	92	54.245	Tursiops_truncatus
ENSORLG00015016656	slbp	61	59.146	ENSTTRG00000004010	-	89	58.434	Tursiops_truncatus
ENSORLG00015016656	slbp	72	55.385	ENSUAMG00000012990	SLBP	82	52.282	Ursus_americanus
ENSORLG00015016656	slbp	50	59.091	ENSUMAG00000006119	SLBP	88	53.933	Ursus_maritimus
ENSORLG00015016656	slbp	73	54.040	ENSVVUG00000015578	-	71	57.426	Vulpes_vulpes
ENSORLG00015016656	slbp	95	47.191	ENSXETG00000003876	slbp	92	48.828	Xenopus_tropicalis
ENSORLG00015016656	slbp	87	69.620	ENSXCOG00000008275	slbp	91	69.620	Xiphophorus_couchianus
ENSORLG00015016656	slbp	97	65.038	ENSXMAG00000001331	-	97	65.038	Xiphophorus_maculatus