EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015016750 (Gene tree)
Gene ID: -
Gene Symbol: skiv2l
Alias: -
Full Name: SKI2 homolog%2C superkiller viralicidic activity 2-like
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 19937 bases
Position: chr11:4353067-4373003
Accession: ZDB-GENE-010430-5
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015032070	rRNA_proc-arch	PF13234.6	8.3e-30	1	1
ENSORLP00015015751	rRNA_proc-arch	PF13234.6	8.9e-30	1	1
ENSORLP00015015708	rRNA_proc-arch	PF13234.6	1.9e-21	1	1
ENSORLP00015032070	DEAD	PF00270.29	3e-17	1	1
ENSORLP00015015751	DEAD	PF00270.29	3.2e-17	1	1
ENSORLP00015015708	DEAD	PF00270.29	3.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015023737	-	3814	-	ENSORLP00015032070	1199 (aa)	-	-
ENSORLT00015023693	-	3549	-	ENSORLP00015015708	1182 (aa)	-	-
ENSORLT00015023759	-	4509	-	ENSORLP00015015751	1246 (aa)	-	-

Gene Model

Click here to download ENSORLG00015016750's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015016750's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015016750	skiv2l	80	35.494	ENSORLG00015012924	mtrex	94	34.568

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015016750	skiv2l	99	60.884	ENSG00000204351	SKIV2L	99	60.697	Homo_sapiens
ENSORLG00015016750	skiv2l	100	88.042	ENSAPOG00000008257	skiv2l	100	88.042	Acanthochromis_polyacanthus
ENSORLG00015016750	skiv2l	99	61.044	ENSAMEG00000002078	SKIV2L	99	61.124	Ailuropoda_melanoleuca
ENSORLG00015016750	skiv2l	99	86.386	ENSACIG00000016719	skiv2l	99	86.386	Amphilophus_citrinellus
ENSORLG00015016750	skiv2l	100	88.202	ENSAOCG00000017352	skiv2l	100	88.202	Amphiprion_ocellaris
ENSORLG00015016750	skiv2l	100	88.122	ENSAPEG00000001055	skiv2l	100	88.122	Amphiprion_percula
ENSORLG00015016750	skiv2l	100	88.523	ENSATEG00000007601	skiv2l	100	88.523	Anabas_testudineus
ENSORLG00015016750	skiv2l	100	62.793	ENSACAG00000011746	SKIV2L	99	63.466	Anolis_carolinensis
ENSORLG00015016750	skiv2l	99	61.446	ENSANAG00000037992	SKIV2L	99	61.252	Aotus_nancymaae
ENSORLG00015016750	skiv2l	100	88.283	ENSACLG00000006886	skiv2l	100	88.202	Astatotilapia_calliptera
ENSORLG00015016750	skiv2l	100	80.815	ENSAMXG00000011517	skiv2l	100	81.070	Astyanax_mexicanus
ENSORLG00015016750	skiv2l	99	61.538	ENSBTAG00000005587	SKIV2L	99	61.374	Bos_taurus
ENSORLG00015016750	skiv2l	96	40.632	WBGene00008502	skih-2	99	40.839	Caenorhabditis_elegans
ENSORLG00015016750	skiv2l	99	61.205	ENSCJAG00000002263	SKIV2L	99	61.014	Callithrix_jacchus
ENSORLG00015016750	skiv2l	99	61.124	ENSCAFG00000000679	SKIV2L	99	61.203	Canis_familiaris
ENSORLG00015016750	skiv2l	99	61.124	ENSCAFG00020000948	SKIV2L	99	61.203	Canis_lupus_dingo
ENSORLG00015016750	skiv2l	99	61.538	ENSCHIG00000012897	SKIV2L	99	61.344	Capra_hircus
ENSORLG00015016750	skiv2l	99	61.205	ENSTSYG00000012133	SKIV2L	99	61.076	Carlito_syrichta
ENSORLG00015016750	skiv2l	99	61.563	ENSCPOG00000001307	SKIV2L	99	61.624	Cavia_porcellus
ENSORLG00015016750	skiv2l	99	61.446	ENSCCAG00000026206	SKIV2L	99	61.252	Cebus_capucinus
ENSORLG00015016750	skiv2l	99	61.044	ENSCATG00000036901	SKIV2L	99	61.094	Cercocebus_atys
ENSORLG00015016750	skiv2l	99	61.285	ENSCLAG00000007678	SKIV2L	99	61.283	Chinchilla_lanigera
ENSORLG00015016750	skiv2l	99	61.520	ENSCSAG00000008988	SKIV2L	99	61.234	Chlorocebus_sabaeus
ENSORLG00015016750	skiv2l	83	65.938	ENSCPBG00000000343	SKIV2L	99	59.785	Chrysemys_picta_bellii
ENSORLG00015016750	skiv2l	93	51.416	ENSCING00000005576	-	99	51.073	Ciona_intestinalis
ENSORLG00015016750	skiv2l	99	61.124	ENSCANG00000039709	SKIV2L	100	60.445	Colobus_angolensis_palliatus
ENSORLG00015016750	skiv2l	99	61.477	ENSCGRG00001008385	Skiv2l	99	61.270	Cricetulus_griseus_chok1gshd
ENSORLG00015016750	skiv2l	99	84.912	ENSCSEG00000011326	skiv2l	99	84.912	Cynoglossus_semilaevis
ENSORLG00015016750	skiv2l	100	88.061	ENSCVAG00000003072	skiv2l	99	89.858	Cyprinodon_variegatus
ENSORLG00015016750	skiv2l	100	81.695	ENSDARG00000062206	skiv2l	100	81.535	Danio_rerio
ENSORLG00015016750	skiv2l	92	66.148	ENSDNOG00000037590	SKIV2L	93	66.160	Dasypus_novemcinctus
ENSORLG00015016750	skiv2l	93	45.993	FBgn0039117	tst	97	45.659	Drosophila_melanogaster
ENSORLG00015016750	skiv2l	71	74.684	ENSETEG00000009522	SKIV2L	69	74.684	Echinops_telfairi
ENSORLG00015016750	skiv2l	94	55.250	ENSEBUG00000013680	-	98	54.880	Eptatretus_burgeri
ENSORLG00015016750	skiv2l	93	62.234	ENSEASG00005015534	SKIV2L	100	62.585	Equus_asinus_asinus
ENSORLG00015016750	skiv2l	93	61.493	ENSECAG00000021823	SKIV2L	95	61.718	Equus_caballus
ENSORLG00015016750	skiv2l	54	74.308	ENSEEUG00000005049	SKIV2L	57	74.308	Erinaceus_europaeus
ENSORLG00015016750	skiv2l	100	83.293	ENSELUG00000000181	skiv2l	97	86.802	Esox_lucius
ENSORLG00015016750	skiv2l	99	61.365	ENSFCAG00000004519	SKIV2L	99	61.362	Felis_catus
ENSORLG00015016750	skiv2l	99	60.129	ENSFDAG00000009438	SKIV2L	99	60.174	Fukomys_damarensis
ENSORLG00015016750	skiv2l	100	88.301	ENSFHEG00000008853	skiv2l	100	88.301	Fundulus_heteroclitus
ENSORLG00015016750	skiv2l	99	80.305	ENSGMOG00000005926	skiv2l	99	80.305	Gadus_morhua
ENSORLG00015016750	skiv2l	80	53.736	ENSGALG00000035499	SKIV2L	99	55.988	Gallus_gallus
ENSORLG00015016750	skiv2l	100	88.381	ENSGAFG00000002382	skiv2l	100	88.381	Gambusia_affinis
ENSORLG00015016750	skiv2l	100	86.991	ENSGACG00000002927	skiv2l	99	86.991	Gasterosteus_aculeatus
ENSORLG00015016750	skiv2l	50	68.085	ENSGAGG00000015556	SKIV2L	73	74.164	Gopherus_agassizii
ENSORLG00015016750	skiv2l	99	61.044	ENSGGOG00000002270	SKIV2L	99	60.856	Gorilla_gorilla
ENSORLG00015016750	skiv2l	100	88.443	ENSHBUG00000000726	skiv2l	100	88.363	Haplochromis_burtoni
ENSORLG00015016750	skiv2l	99	61.427	ENSHGLG00000016596	SKIV2L	99	61.313	Heterocephalus_glaber_female
ENSORLG00015016750	skiv2l	99	59.743	ENSHGLG00100014161	SKIV2L	99	59.573	Heterocephalus_glaber_male
ENSORLG00015016750	skiv2l	98	80.456	ENSHCOG00000007191	skiv2l	100	80.456	Hippocampus_comes
ENSORLG00015016750	skiv2l	100	80.256	ENSIPUG00000016263	skiv2l	100	80.324	Ictalurus_punctatus
ENSORLG00015016750	skiv2l	96	65.123	ENSSTOG00000014596	SKIV2L	99	61.203	Ictidomys_tridecemlineatus
ENSORLG00015016750	skiv2l	51	84.328	ENSLACG00000002986	-	60	62.585	Latimeria_chalumnae
ENSORLG00015016750	skiv2l	99	61.365	ENSLAFG00000014231	SKIV2L	99	61.234	Loxodonta_africana
ENSORLG00015016750	skiv2l	99	61.285	ENSMFAG00000034235	SKIV2L	99	61.331	Macaca_fascicularis
ENSORLG00015016750	skiv2l	99	61.285	ENSMMUG00000000736	SKIV2L	99	61.331	Macaca_mulatta
ENSORLG00015016750	skiv2l	99	61.285	ENSMNEG00000044474	SKIV2L	99	61.331	Macaca_nemestrina
ENSORLG00015016750	skiv2l	99	61.044	ENSMLEG00000030512	SKIV2L	99	61.094	Mandrillus_leucophaeus
ENSORLG00015016750	skiv2l	100	87.660	ENSMAMG00000002927	skiv2l	100	87.660	Mastacembelus_armatus
ENSORLG00015016750	skiv2l	100	88.363	ENSMZEG00005026415	skiv2l	100	88.283	Maylandia_zebra
ENSORLG00015016750	skiv2l	60	70.507	ENSMGAG00000001320	SKIV2L	81	70.507	Meleagris_gallopavo
ENSORLG00015016750	skiv2l	99	60.772	ENSMAUG00000018613	Skiv2l	99	60.745	Mesocricetus_auratus
ENSORLG00015016750	skiv2l	99	61.687	ENSMICG00000046331	SKIV2L	99	61.648	Microcebus_murinus
ENSORLG00015016750	skiv2l	99	60.144	ENSMOCG00000014240	Skiv2l	99	60.032	Microtus_ochrogaster
ENSORLG00015016750	skiv2l	99	83.695	ENSMMOG00000014547	skiv2l	99	83.695	Mola_mola
ENSORLG00015016750	skiv2l	96	65.641	ENSMODG00000015052	SKIV2L	99	61.563	Monodelphis_domestica
ENSORLG00015016750	skiv2l	99	83.146	ENSMALG00000010535	skiv2l	99	83.146	Monopterus_albus
ENSORLG00015016750	skiv2l	99	61.786	MGP_CAROLIEiJ_G0021477	Skiv2l	99	61.508	Mus_caroli
ENSORLG00015016750	skiv2l	99	61.557	ENSMUSG00000040356	Skiv2l	99	61.429	Mus_musculus
ENSORLG00015016750	skiv2l	99	61.947	MGP_PahariEiJ_G0020472	Skiv2l	99	61.746	Mus_pahari
ENSORLG00015016750	skiv2l	99	61.396	MGP_SPRETEiJ_G0022382	Skiv2l	99	61.270	Mus_spretus
ENSORLG00015016750	skiv2l	99	61.205	ENSMPUG00000010567	SKIV2L	99	61.265	Mustela_putorius_furo
ENSORLG00015016750	skiv2l	99	61.316	ENSMLUG00000000628	SKIV2L	99	61.124	Myotis_lucifugus
ENSORLG00015016750	skiv2l	99	84.863	ENSNBRG00000018650	skiv2l	99	84.622	Neolamprologus_brichardi
ENSORLG00015016750	skiv2l	99	60.533	ENSNLEG00000006451	SKIV2L	100	60.383	Nomascus_leucogenys
ENSORLG00015016750	skiv2l	79	63.717	ENSMEUG00000006072	SKIV2L	78	63.717	Notamacropus_eugenii
ENSORLG00015016750	skiv2l	99	60.737	ENSOPRG00000003972	SKIV2L	99	60.695	Ochotona_princeps
ENSORLG00015016750	skiv2l	99	61.446	ENSODEG00000017516	SKIV2L	99	61.441	Octodon_degus
ENSORLG00015016750	skiv2l	100	88.764	ENSONIG00000013500	skiv2l	100	88.764	Oreochromis_niloticus
ENSORLG00015016750	skiv2l	99	61.285	ENSOCUG00000007019	SKIV2L	99	61.441	Oryctolagus_cuniculus
ENSORLG00015016750	skiv2l	100	98.957	ENSORLG00000002021	skiv2l	100	98.957	Oryzias_latipes
ENSORLG00015016750	skiv2l	100	98.796	ENSORLG00020009462	skiv2l	100	98.796	Oryzias_latipes_hni
ENSORLG00015016750	skiv2l	100	93.745	ENSOMEG00000008531	skiv2l	100	93.745	Oryzias_melastigma
ENSORLG00015016750	skiv2l	99	61.458	ENSOGAG00000009578	SKIV2L	99	61.252	Otolemur_garnettii
ENSORLG00015016750	skiv2l	99	58.150	ENSOARG00000002411	-	99	58.005	Ovis_aries
ENSORLG00015016750	skiv2l	99	60.623	ENSPPAG00000040211	SKIV2L	100	60.553	Pan_paniscus
ENSORLG00015016750	skiv2l	99	61.526	ENSPPRG00000005017	SKIV2L	99	61.520	Panthera_pardus
ENSORLG00015016750	skiv2l	99	61.124	ENSPTIG00000021656	SKIV2L	99	61.124	Panthera_tigris_altaica
ENSORLG00015016750	skiv2l	99	61.044	ENSPTRG00000017997	SKIV2L	99	60.856	Pan_troglodytes
ENSORLG00015016750	skiv2l	99	60.192	ENSPANG00000011501	SKIV2L	100	60.364	Papio_anubis
ENSORLG00015016750	skiv2l	100	77.645	ENSPKIG00000011876	skiv2l	100	77.645	Paramormyrops_kingsleyae
ENSORLG00015016750	skiv2l	99	83.910	ENSPMGG00000019707	skiv2l	99	84.232	Periophthalmus_magnuspinnatus
ENSORLG00015016750	skiv2l	99	61.093	ENSPEMG00000019001	Skiv2l	99	60.983	Peromyscus_maniculatus_bairdii
ENSORLG00015016750	skiv2l	96	65.195	ENSPCIG00000018792	SKIV2L	99	61.168	Phascolarctos_cinereus
ENSORLG00015016750	skiv2l	100	88.061	ENSPFOG00000002424	skiv2l	100	88.061	Poecilia_formosa
ENSORLG00015016750	skiv2l	100	88.061	ENSPLAG00000018304	skiv2l	100	88.061	Poecilia_latipinna
ENSORLG00015016750	skiv2l	100	88.141	ENSPMEG00000006997	skiv2l	100	88.141	Poecilia_mexicana
ENSORLG00015016750	skiv2l	99	83.836	ENSPREG00000002277	skiv2l	98	88.809	Poecilia_reticulata
ENSORLG00015016750	skiv2l	99	60.706	ENSPPYG00000016472	SKIV2L	99	60.522	Pongo_abelii
ENSORLG00015016750	skiv2l	78	78.481	ENSPCAG00000004178	SKIV2L	75	78.481	Procavia_capensis
ENSORLG00015016750	skiv2l	99	61.446	ENSPCOG00000010308	SKIV2L	99	61.648	Propithecus_coquereli
ENSORLG00015016750	skiv2l	99	61.637	ENSPVAG00000005136	SKIV2L	99	61.441	Pteropus_vampyrus
ENSORLG00015016750	skiv2l	99	83.151	ENSPNYG00000017853	skiv2l	99	88.284	Pundamilia_nyererei
ENSORLG00015016750	skiv2l	99	82.320	ENSPNAG00000011823	skiv2l	100	81.623	Pygocentrus_nattereri
ENSORLG00015016750	skiv2l	99	61.866	ENSRNOG00000000421	Skiv2l	99	61.587	Rattus_norvegicus
ENSORLG00015016750	skiv2l	99	59.936	ENSRBIG00000035485	SKIV2L	99	60.016	Rhinopithecus_bieti
ENSORLG00015016750	skiv2l	99	61.205	ENSRROG00000036429	SKIV2L	99	61.252	Rhinopithecus_roxellana
ENSORLG00015016750	skiv2l	79	63.492	YLR398C	-	72	63.492	Saccharomyces_cerevisiae
ENSORLG00015016750	skiv2l	99	61.526	ENSSBOG00000027920	SKIV2L	99	61.331	Saimiri_boliviensis_boliviensis
ENSORLG00015016750	skiv2l	97	65.298	ENSSHAG00000008963	SKIV2L	99	60.190	Sarcophilus_harrisii
ENSORLG00015016750	skiv2l	100	80.766	ENSSFOG00015016930	skiv2l	100	80.766	Scleropages_formosus
ENSORLG00015016750	skiv2l	100	87.981	ENSSMAG00000020185	skiv2l	100	87.981	Scophthalmus_maximus
ENSORLG00015016750	skiv2l	100	88.051	ENSSDUG00000019977	skiv2l	100	88.051	Seriola_dumerili
ENSORLG00015016750	skiv2l	99	81.899	ENSSLDG00000024382	skiv2l	99	81.899	Seriola_lalandi_dorsalis
ENSORLG00015016750	skiv2l	99	61.935	ENSSPUG00000012945	SKIV2L	99	61.935	Sphenodon_punctatus
ENSORLG00015016750	skiv2l	95	88.240	ENSSPAG00000012904	skiv2l	99	88.240	Stegastes_partitus
ENSORLG00015016750	skiv2l	99	61.331	ENSSSCG00000001424	SKIV2L	100	60.762	Sus_scrofa
ENSORLG00015016750	skiv2l	73	83.957	ENSTRUG00000000966	skiv2l	88	83.957	Takifugu_rubripes
ENSORLG00015016750	skiv2l	100	83.453	ENSTNIG00000004382	skiv2l	99	83.693	Tetraodon_nigroviridis
ENSORLG00015016750	skiv2l	93	62.699	ENSTBEG00000003462	SKIV2L	94	62.699	Tupaia_belangeri
ENSORLG00015016750	skiv2l	99	57.430	ENSTTRG00000005931	SKIV2L	99	57.561	Tursiops_truncatus
ENSORLG00015016750	skiv2l	99	61.285	ENSUAMG00000024336	SKIV2L	99	61.362	Ursus_americanus
ENSORLG00015016750	skiv2l	93	61.893	ENSUMAG00000012666	SKIV2L	100	62.181	Ursus_maritimus
ENSORLG00015016750	skiv2l	99	61.044	ENSVVUG00000022807	SKIV2L	99	61.142	Vulpes_vulpes
ENSORLG00015016750	skiv2l	99	58.564	ENSXETG00000010932	skiv2l	99	58.564	Xenopus_tropicalis
ENSORLG00015016750	skiv2l	99	87.138	ENSXCOG00000019517	skiv2l	97	87.138	Xiphophorus_couchianus
ENSORLG00015016750	skiv2l	100	88.221	ENSXMAG00000014079	skiv2l	100	87.981	Xiphophorus_maculatus