EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015016777 (Gene tree)
Gene ID: -
Gene Symbol: ptcd2
Alias: -
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 2062 bases
Position: chr12:7339803-7341864
Accession: ZDB-GENE-050417-82
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015015826	MRP-S27	PF10037.9	3.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015023851	-	1038	-	ENSORLP00015015826	345 (aa)	-	-

Gene Model

Click here to download ENSORLG00015016777's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015016777's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015016777	ptcd2	99	46.243	ENSG00000049883	PTCD2	100	41.872	Homo_sapiens
ENSORLG00015016777	ptcd2	99	69.855	ENSAPOG00000020682	ptcd2	91	69.855	Acanthochromis_polyacanthus
ENSORLG00015016777	ptcd2	99	44.509	ENSAMEG00000007194	PTCD2	89	44.509	Ailuropoda_melanoleuca
ENSORLG00015016777	ptcd2	98	65.015	ENSACIG00000002053	ptcd2	100	65.015	Amphilophus_citrinellus
ENSORLG00015016777	ptcd2	99	70.145	ENSAOCG00000006616	ptcd2	89	70.145	Amphiprion_ocellaris
ENSORLG00015016777	ptcd2	99	70.145	ENSAPEG00000022926	ptcd2	89	70.145	Amphiprion_percula
ENSORLG00015016777	ptcd2	99	48.725	ENSACAG00000009747	PTCD2	90	48.725	Anolis_carolinensis
ENSORLG00015016777	ptcd2	99	46.686	ENSANAG00000029353	PTCD2	89	46.132	Aotus_nancymaae
ENSORLG00015016777	ptcd2	99	72.464	ENSACLG00000027742	ptcd2	89	72.464	Astatotilapia_calliptera
ENSORLG00015016777	ptcd2	99	52.273	ENSAMXG00000029404	ptcd2	93	52.273	Astyanax_mexicanus
ENSORLG00015016777	ptcd2	100	45.869	ENSBTAG00000014675	PTCD2	91	45.869	Bos_taurus
ENSORLG00015016777	ptcd2	99	44.957	ENSCJAG00000016364	PTCD2	89	44.413	Callithrix_jacchus
ENSORLG00015016777	ptcd2	99	46.724	ENSCAFG00000007982	PTCD2	82	46.571	Canis_familiaris
ENSORLG00015016777	ptcd2	99	46.686	ENSCAFG00020019147	PTCD2	97	46.686	Canis_lupus_dingo
ENSORLG00015016777	ptcd2	100	46.154	ENSCHIG00000017118	PTCD2	91	46.154	Capra_hircus
ENSORLG00015016777	ptcd2	99	45.429	ENSCPOG00000040168	PTCD2	91	45.014	Cavia_porcellus
ENSORLG00015016777	ptcd2	99	46.686	ENSCCAG00000029389	-	89	46.132	Cebus_capucinus
ENSORLG00015016777	ptcd2	61	53.953	ENSCCAG00000021996	-	69	53.953	Cebus_capucinus
ENSORLG00015016777	ptcd2	99	46.821	ENSCATG00000019069	PTCD2	90	46.821	Cercocebus_atys
ENSORLG00015016777	ptcd2	99	46.532	ENSCLAG00000000072	PTCD2	90	46.532	Chinchilla_lanigera
ENSORLG00015016777	ptcd2	99	47.399	ENSCSAG00000015623	PTCD2	90	47.399	Chlorocebus_sabaeus
ENSORLG00015016777	ptcd2	72	50.588	ENSCHOG00000010634	PTCD2	73	50.588	Choloepus_hoffmanni
ENSORLG00015016777	ptcd2	99	43.343	ENSCPBG00000000216	PTCD2	91	43.343	Chrysemys_picta_bellii
ENSORLG00015016777	ptcd2	99	47.110	ENSCANG00000035636	PTCD2	89	46.686	Colobus_angolensis_palliatus
ENSORLG00015016777	ptcd2	99	46.286	ENSCGRG00001015289	Ptcd2	77	46.286	Cricetulus_griseus_chok1gshd
ENSORLG00015016777	ptcd2	99	46.286	ENSCGRG00000006193	Ptcd2	77	46.286	Cricetulus_griseus_crigri
ENSORLG00015016777	ptcd2	99	71.884	ENSCVAG00000001285	ptcd2	88	71.884	Cyprinodon_variegatus
ENSORLG00015016777	ptcd2	99	52.000	ENSDARG00000035391	ptcd2	91	52.000	Danio_rerio
ENSORLG00015016777	ptcd2	99	45.143	ENSDNOG00000008719	PTCD2	90	44.669	Dasypus_novemcinctus
ENSORLG00015016777	ptcd2	99	45.584	ENSDORG00000004921	Ptcd2	90	45.429	Dipodomys_ordii
ENSORLG00015016777	ptcd2	99	43.020	ENSETEG00000016542	PTCD2	90	43.020	Echinops_telfairi
ENSORLG00015016777	ptcd2	99	45.714	ENSEASG00005018038	PTCD2	92	45.714	Equus_asinus_asinus
ENSORLG00015016777	ptcd2	99	45.714	ENSECAG00000007022	PTCD2	90	45.714	Equus_caballus
ENSORLG00015016777	ptcd2	99	47.110	ENSEEUG00000014031	PTCD2	89	47.110	Erinaceus_europaeus
ENSORLG00015016777	ptcd2	99	61.714	ENSELUG00000003584	ptcd2	91	61.714	Esox_lucius
ENSORLG00015016777	ptcd2	89	46.753	ENSFCAG00000045432	PTCD2	72	46.753	Felis_catus
ENSORLG00015016777	ptcd2	89	44.481	ENSFALG00000010299	PTCD2	94	44.481	Ficedula_albicollis
ENSORLG00015016777	ptcd2	99	43.931	ENSFDAG00000018461	PTCD2	90	43.931	Fukomys_damarensis
ENSORLG00015016777	ptcd2	98	62.536	ENSGMOG00000003637	ptcd2	90	62.536	Gadus_morhua
ENSORLG00015016777	ptcd2	99	42.000	ENSGALG00000038260	PTCD2	92	42.000	Gallus_gallus
ENSORLG00015016777	ptcd2	99	48.571	ENSGAGG00000021952	PTCD2	90	48.571	Gopherus_agassizii
ENSORLG00015016777	ptcd2	99	46.243	ENSGGOG00000010695	PTCD2	89	46.243	Gorilla_gorilla
ENSORLG00015016777	ptcd2	99	72.464	ENSHBUG00000009191	ptcd2	89	72.464	Haplochromis_burtoni
ENSORLG00015016777	ptcd2	99	46.286	ENSHGLG00000001234	PTCD2	91	46.286	Heterocephalus_glaber_female
ENSORLG00015016777	ptcd2	99	46.286	ENSHGLG00100015419	PTCD2	91	46.286	Heterocephalus_glaber_male
ENSORLG00015016777	ptcd2	99	66.763	ENSHCOG00000001703	ptcd2	90	66.185	Hippocampus_comes
ENSORLG00015016777	ptcd2	92	55.352	ENSIPUG00000006080	ptcd2	91	54.571	Ictalurus_punctatus
ENSORLG00015016777	ptcd2	99	45.245	ENSSTOG00000006596	PTCD2	91	44.828	Ictidomys_tridecemlineatus
ENSORLG00015016777	ptcd2	99	45.821	ENSJJAG00000024388	Ptcd2	90	45.821	Jaculus_jaculus
ENSORLG00015016777	ptcd2	97	58.358	ENSKMAG00000009329	ptcd2	90	58.358	Kryptolebias_marmoratus
ENSORLG00015016777	ptcd2	99	65.896	ENSLBEG00000024871	ptcd2	89	65.896	Labrus_bergylta
ENSORLG00015016777	ptcd2	99	53.429	ENSLOCG00000011122	ptcd2	90	53.429	Lepisosteus_oculatus
ENSORLG00015016777	ptcd2	78	50.183	ENSLAFG00000004115	PTCD2	88	50.183	Loxodonta_africana
ENSORLG00015016777	ptcd2	99	47.399	ENSMFAG00000031516	PTCD2	89	47.399	Macaca_fascicularis
ENSORLG00015016777	ptcd2	99	47.110	ENSMNEG00000007537	PTCD2	90	47.110	Macaca_nemestrina
ENSORLG00015016777	ptcd2	99	46.821	ENSMLEG00000031093	PTCD2	89	46.821	Mandrillus_leucophaeus
ENSORLG00015016777	ptcd2	99	70.435	ENSMAMG00000018529	ptcd2	91	70.435	Mastacembelus_armatus
ENSORLG00015016777	ptcd2	99	72.464	ENSMZEG00005003625	ptcd2	89	72.464	Maylandia_zebra
ENSORLG00015016777	ptcd2	99	42.775	ENSMGAG00000005033	PTCD2	99	42.651	Meleagris_gallopavo
ENSORLG00015016777	ptcd2	99	51.429	ENSMAUG00000020253	Ptcd2	90	51.429	Mesocricetus_auratus
ENSORLG00015016777	ptcd2	99	44.729	ENSMICG00000004535	PTCD2	90	44.729	Microcebus_murinus
ENSORLG00015016777	ptcd2	99	46.286	ENSMOCG00000019985	Ptcd2	92	46.286	Microtus_ochrogaster
ENSORLG00015016777	ptcd2	99	44.413	ENSMODG00000001695	PTCD2	90	44.413	Monodelphis_domestica
ENSORLG00015016777	ptcd2	99	70.145	ENSMALG00000022372	ptcd2	91	70.145	Monopterus_albus
ENSORLG00015016777	ptcd2	99	46.000	MGP_CAROLIEiJ_G0018829	Ptcd2	92	46.000	Mus_caroli
ENSORLG00015016777	ptcd2	99	44.857	ENSMUSG00000021650	Ptcd2	92	44.857	Mus_musculus
ENSORLG00015016777	ptcd2	99	47.399	MGP_PahariEiJ_G0015904	Ptcd2	91	47.399	Mus_pahari
ENSORLG00015016777	ptcd2	99	45.714	MGP_SPRETEiJ_G0019711	Ptcd2	92	45.714	Mus_spretus
ENSORLG00015016777	ptcd2	99	45.714	ENSMPUG00000014401	PTCD2	91	45.299	Mustela_putorius_furo
ENSORLG00015016777	ptcd2	99	45.087	ENSMLUG00000007374	PTCD2	89	45.087	Myotis_lucifugus
ENSORLG00015016777	ptcd2	99	45.299	ENSNGAG00000005027	Ptcd2	92	44.602	Nannospalax_galili
ENSORLG00015016777	ptcd2	99	72.464	ENSNBRG00000008174	ptcd2	91	72.464	Neolamprologus_brichardi
ENSORLG00015016777	ptcd2	94	68.389	ENSNBRG00000000092	-	100	68.389	Neolamprologus_brichardi
ENSORLG00015016777	ptcd2	99	46.243	ENSNLEG00000004516	PTCD2	89	46.243	Nomascus_leucogenys
ENSORLG00015016777	ptcd2	99	45.299	ENSOPRG00000007290	PTCD2	90	45.143	Ochotona_princeps
ENSORLG00015016777	ptcd2	99	47.143	ENSODEG00000016417	PTCD2	91	47.143	Octodon_degus
ENSORLG00015016777	ptcd2	83	71.478	ENSONIG00000011269	ptcd2	85	71.478	Oreochromis_niloticus
ENSORLG00015016777	ptcd2	99	45.954	ENSOCUG00000007970	PTCD2	91	45.714	Oryctolagus_cuniculus
ENSORLG00015016777	ptcd2	99	95.087	ENSORLG00000003851	ptcd2	89	95.087	Oryzias_latipes
ENSORLG00015016777	ptcd2	99	94.509	ENSORLG00020009823	ptcd2	90	94.509	Oryzias_latipes_hni
ENSORLG00015016777	ptcd2	99	84.393	ENSOMEG00000012396	ptcd2	84	84.393	Oryzias_melastigma
ENSORLG00015016777	ptcd2	99	45.714	ENSOGAG00000008390	PTCD2	90	45.714	Otolemur_garnettii
ENSORLG00015016777	ptcd2	100	46.439	ENSOARG00000005087	PTCD2	90	46.439	Ovis_aries
ENSORLG00015016777	ptcd2	99	46.243	ENSPPAG00000028480	PTCD2	89	46.243	Pan_paniscus
ENSORLG00015016777	ptcd2	99	45.954	ENSPTRG00000016968	PTCD2	89	45.954	Pan_troglodytes
ENSORLG00015016777	ptcd2	98	46.957	ENSPANG00000006611	PTCD2	89	46.957	Papio_anubis
ENSORLG00015016777	ptcd2	99	53.258	ENSPKIG00000019896	ptcd2	91	53.258	Paramormyrops_kingsleyae
ENSORLG00015016777	ptcd2	87	46.926	ENSPSIG00000014559	PTCD2	96	46.774	Pelodiscus_sinensis
ENSORLG00015016777	ptcd2	99	47.414	ENSPEMG00000000884	Ptcd2	91	47.414	Peromyscus_maniculatus_bairdii
ENSORLG00015016777	ptcd2	99	47.429	ENSPCIG00000029047	PTCD2	90	47.143	Phascolarctos_cinereus
ENSORLG00015016777	ptcd2	99	66.377	ENSPLAG00000010456	ptcd2	90	66.377	Poecilia_latipinna
ENSORLG00015016777	ptcd2	99	66.957	ENSPREG00000021797	ptcd2	88	66.957	Poecilia_reticulata
ENSORLG00015016777	ptcd2	99	41.935	ENSPPYG00000015543	PTCD2	88	41.935	Pongo_abelii
ENSORLG00015016777	ptcd2	77	42.647	ENSPCAG00000006806	PTCD2	87	42.647	Procavia_capensis
ENSORLG00015016777	ptcd2	99	44.928	ENSPVAG00000010935	PTCD2	89	44.928	Pteropus_vampyrus
ENSORLG00015016777	ptcd2	99	72.464	ENSPNYG00000003122	ptcd2	89	72.464	Pundamilia_nyererei
ENSORLG00015016777	ptcd2	99	62.069	ENSPNAG00000021490	ptcd2	91	62.069	Pygocentrus_nattereri
ENSORLG00015016777	ptcd2	99	46.286	ENSRNOG00000028403	Ptcd2	92	46.286	Rattus_norvegicus
ENSORLG00015016777	ptcd2	99	43.353	ENSRBIG00000032929	PTCD2	89	42.939	Rhinopithecus_bieti
ENSORLG00015016777	ptcd2	99	47.399	ENSRROG00000000080	PTCD2	90	46.974	Rhinopithecus_roxellana
ENSORLG00015016777	ptcd2	99	46.439	ENSSBOG00000018911	PTCD2	90	46.132	Saimiri_boliviensis_boliviensis
ENSORLG00015016777	ptcd2	99	44.413	ENSSHAG00000003833	PTCD2	89	44.413	Sarcophilus_harrisii
ENSORLG00015016777	ptcd2	99	54.000	ENSSFOG00015015415	ptcd2	91	54.000	Scleropages_formosus
ENSORLG00015016777	ptcd2	99	61.739	ENSSMAG00000010350	ptcd2	90	61.739	Scophthalmus_maximus
ENSORLG00015016777	ptcd2	99	68.986	ENSSDUG00000008142	ptcd2	86	68.986	Seriola_dumerili
ENSORLG00015016777	ptcd2	99	68.696	ENSSLDG00000015284	ptcd2	91	68.696	Seriola_lalandi_dorsalis
ENSORLG00015016777	ptcd2	57	47.291	ENSSARG00000004983	PTCD2	68	47.887	Sorex_araneus
ENSORLG00015016777	ptcd2	99	43.820	ENSSPUG00000000176	PTCD2	88	43.820	Sphenodon_punctatus
ENSORLG00015016777	ptcd2	99	65.217	ENSSPAG00000008591	ptcd2	89	65.217	Stegastes_partitus
ENSORLG00015016777	ptcd2	99	45.429	ENSSSCG00000016975	PTCD2	82	45.429	Sus_scrofa
ENSORLG00015016777	ptcd2	98	44.186	ENSTGUG00000005705	PTCD2	99	44.186	Taeniopygia_guttata
ENSORLG00015016777	ptcd2	99	44.798	ENSTBEG00000016559	PTCD2	89	44.759	Tupaia_belangeri
ENSORLG00015016777	ptcd2	99	45.507	ENSTTRG00000011851	PTCD2	89	45.507	Tursiops_truncatus
ENSORLG00015016777	ptcd2	99	44.286	ENSUAMG00000007583	PTCD2	82	44.286	Ursus_americanus
ENSORLG00015016777	ptcd2	99	44.509	ENSUMAG00000007666	PTCD2	90	44.509	Ursus_maritimus
ENSORLG00015016777	ptcd2	99	44.000	ENSVPAG00000009597	PTCD2	90	44.000	Vicugna_pacos
ENSORLG00015016777	ptcd2	99	46.286	ENSVVUG00000007299	-	98	41.436	Vulpes_vulpes
ENSORLG00015016777	ptcd2	100	47.222	ENSXETG00000031652	PTCD2	92	46.944	Xenopus_tropicalis
ENSORLG00015016777	ptcd2	99	65.797	ENSXMAG00000005940	ptcd2	82	65.797	Xiphophorus_maculatus