EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015016946 (Gene tree)
Gene ID: -
Gene Symbol: rab11ba
Alias: -
Full Name: RAB11B%2C member RAS oncogene family%2C a
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 7107 bases
Position: chr4:28370990-28378096
Accession: ZDB-GENE-040426-2860
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015015985	MMR_HSR1	PF01926.23	5.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015024088	-	801	-	ENSORLP00015015985	266 (aa)	-	-

Gene Model

Click here to download ENSORLG00015016946's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015016946's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015016946	rab11ba	58	32.911	ENSORLG00015015121	si:dkey-13a21.4	77	32.911
ENSORLG00015016946	rab11ba	69	39.894	ENSORLG00015004265	rab9b	89	39.894
ENSORLG00015016946	rab11ba	63	32.759	ENSORLG00015020441	-	84	32.759
ENSORLG00015016946	rab11ba	64	30.460	ENSORLG00015010005	dnajc27	64	30.460
ENSORLG00015016946	rab11ba	64	46.199	ENSORLG00015022289	-	80	46.199
ENSORLG00015016946	rab11ba	62	32.121	ENSORLG00015010289	rras	90	33.333
ENSORLG00015016946	rab11ba	64	52.353	ENSORLG00015010986	rab1ab	84	52.353
ENSORLG00015016946	rab11ba	59	36.306	ENSORLG00015013537	rab6bb	75	36.306
ENSORLG00015016946	rab11ba	64	38.235	ENSORLG00015014594	rab3db	77	38.235
ENSORLG00015016946	rab11ba	60	32.500	ENSORLG00015002191	rheb	86	32.500
ENSORLG00015016946	rab11ba	63	37.870	ENSORLG00015000142	si:dkey-34d22.5	77	37.870
ENSORLG00015016946	rab11ba	77	42.157	ENSORLG00015012854	rab5aa	89	42.157
ENSORLG00015016946	rab11ba	65	52.299	ENSORLG00015006881	rab14	81	52.299
ENSORLG00015016946	rab11ba	68	42.623	ENSORLG00015004273	rab42a	84	42.623
ENSORLG00015016946	rab11ba	61	45.122	ENSORLG00015007182	rab18b	80	45.122
ENSORLG00015016946	rab11ba	66	43.750	ENSORLG00015020972	rab30	87	43.750
ENSORLG00015016946	rab11ba	64	34.239	ENSORLG00015014829	rab34a	68	34.239
ENSORLG00015016946	rab11ba	56	41.935	ENSORLG00015013453	-	64	41.935
ENSORLG00015016946	rab11ba	73	43.523	ENSORLG00015015518	-	92	43.523
ENSORLG00015016946	rab11ba	64	34.239	ENSORLG00015000584	rab34b	67	34.239
ENSORLG00015016946	rab11ba	59	38.217	ENSORLG00015010161	RAB41	74	37.580
ENSORLG00015016946	rab11ba	62	43.030	ENSORLG00015007869	rab12	83	39.303
ENSORLG00015016946	rab11ba	79	45.024	ENSORLG00015010098	zgc:171927	99	45.024
ENSORLG00015016946	rab11ba	61	40.741	ENSORLG00015004377	RAB15	78	40.741
ENSORLG00015016946	rab11ba	54	36.364	ENSORLG00015004033	rab23	79	35.583
ENSORLG00015016946	rab11ba	64	52.353	ENSORLG00015000618	-	84	52.353
ENSORLG00015016946	rab11ba	59	36.306	ENSORLG00015006970	rab6ba	75	36.306
ENSORLG00015016946	rab11ba	59	39.877	ENSORLG00015006820	-	79	39.877
ENSORLG00015016946	rab11ba	61	32.317	ENSORLG00015008252	si:ch73-116o1.2	82	34.091
ENSORLG00015016946	rab11ba	68	35.897	ENSORLG00015012872	rab33ba	81	35.897
ENSORLG00015016946	rab11ba	66	43.503	ENSORLG00015013564	-	89	42.938
ENSORLG00015016946	rab11ba	81	83.333	ENSORLG00015019591	rab11al	99	83.333
ENSORLG00015016946	rab11ba	67	71.186	ENSORLG00015019569	rab25b	86	72.024
ENSORLG00015016946	rab11ba	81	87.963	ENSORLG00015010257	rab11a	99	87.963
ENSORLG00015016946	rab11ba	64	38.728	ENSORLG00015016047	zgc:101559	74	38.728
ENSORLG00015016946	rab11ba	81	94.907	ENSORLG00015020173	rab11bb	99	94.907
ENSORLG00015016946	rab11ba	57	35.484	ENSORLG00015011467	kras	93	34.254
ENSORLG00015016946	rab11ba	64	46.784	ENSORLG00015003202	RAB39B	80	46.784
ENSORLG00015016946	rab11ba	61	46.626	ENSORLG00015021900	rab5c	75	46.626
ENSORLG00015016946	rab11ba	61	33.533	ENSORLG00015002284	rerg	82	33.533
ENSORLG00015016946	rab11ba	64	55.556	ENSORLG00015020900	rab2a	81	55.556
ENSORLG00015016946	rab11ba	62	50.000	ENSORLG00015010042	rab35b	99	44.019
ENSORLG00015016946	rab11ba	63	51.497	ENSORLG00015000893	-	78	51.497
ENSORLG00015016946	rab11ba	82	60.550	ENSORLG00015012725	rab25a	70	60.550
ENSORLG00015016946	rab11ba	56	37.333	ENSORLG00015003353	zgc:55558	86	38.272
ENSORLG00015016946	rab11ba	81	95.833	ENSORLG00015016999	RAB11B	99	95.833
ENSORLG00015016946	rab11ba	61	46.626	ENSORLG00015017737	rab5ab	75	46.626
ENSORLG00015016946	rab11ba	59	34.591	ENSORLG00015014268	rabl2	68	34.591
ENSORLG00015016946	rab11ba	61	44.444	ENSORLG00015013638	rab15	76	44.444
ENSORLG00015016946	rab11ba	59	39.877	ENSORLG00015002344	-	78	39.877
ENSORLG00015016946	rab11ba	75	33.333	ENSORLG00015006162	rab6a	92	33.333
ENSORLG00015016946	rab11ba	59	39.877	ENSORLG00015015327	rab33a	59	39.877
ENSORLG00015016946	rab11ba	61	45.679	ENSORLG00015004739	rab18a	79	45.679

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015016946	rab11ba	81	96.296	ENSG00000185236	RAB11B	100	97.826	Homo_sapiens
ENSORLG00015016946	rab11ba	81	94.977	ENSAMEG00000004955	RAB11B	99	94.977	Ailuropoda_melanoleuca
ENSORLG00015016946	rab11ba	64	97.647	ENSACIG00000024374	rab11ba	70	97.647	Amphilophus_citrinellus
ENSORLG00015016946	rab11ba	81	96.759	ENSAOCG00000018050	rab11ba	99	96.759	Amphiprion_ocellaris
ENSORLG00015016946	rab11ba	81	96.296	ENSAPEG00000009177	rab11ba	99	96.296	Amphiprion_percula
ENSORLG00015016946	rab11ba	81	98.611	ENSATEG00000023730	rab11ba	99	98.611	Anabas_testudineus
ENSORLG00015016946	rab11ba	81	96.296	ENSANAG00000037616	RAB11B	99	96.296	Aotus_nancymaae
ENSORLG00015016946	rab11ba	81	96.296	ENSACLG00000005420	rab11ba	99	96.296	Astatotilapia_calliptera
ENSORLG00015016946	rab11ba	76	88.177	ENSACLG00000018852	-	92	88.177	Astatotilapia_calliptera
ENSORLG00015016946	rab11ba	81	78.802	WBGene00004274	rab-11.1	99	78.802	Caenorhabditis_elegans
ENSORLG00015016946	rab11ba	81	96.296	ENSCJAG00000010778	RAB11B	99	96.296	Callithrix_jacchus
ENSORLG00015016946	rab11ba	81	96.296	ENSCAFG00000032060	RAB11B	99	96.296	Canis_familiaris
ENSORLG00015016946	rab11ba	81	96.296	ENSCAFG00020022184	RAB11B	99	96.296	Canis_lupus_dingo
ENSORLG00015016946	rab11ba	81	96.296	ENSTSYG00000014758	RAB11B	99	96.296	Carlito_syrichta
ENSORLG00015016946	rab11ba	81	95.833	ENSCPOG00000030154	RAB11B	99	95.833	Cavia_porcellus
ENSORLG00015016946	rab11ba	81	96.296	ENSCCAG00000031042	RAB11B	99	96.296	Cebus_capucinus
ENSORLG00015016946	rab11ba	81	96.296	ENSCLAG00000003207	RAB11B	99	96.296	Chinchilla_lanigera
ENSORLG00015016946	rab11ba	81	96.296	ENSCSAG00000008024	RAB11B	99	96.296	Chlorocebus_sabaeus
ENSORLG00015016946	rab11ba	81	81.944	ENSCHOG00000013525	RAB11B	99	81.944	Choloepus_hoffmanni
ENSORLG00015016946	rab11ba	81	82.870	ENSCING00000009526	-	99	82.870	Ciona_intestinalis
ENSORLG00015016946	rab11ba	81	96.296	ENSCANG00000040517	RAB11B	99	96.296	Colobus_angolensis_palliatus
ENSORLG00015016946	rab11ba	81	96.296	ENSCGRG00001013827	Rab11b	99	96.296	Cricetulus_griseus_chok1gshd
ENSORLG00015016946	rab11ba	81	96.296	ENSCGRG00000010967	Rab11b	99	96.296	Cricetulus_griseus_crigri
ENSORLG00015016946	rab11ba	81	97.222	ENSCSEG00000007121	rab11ba	84	97.222	Cynoglossus_semilaevis
ENSORLG00015016946	rab11ba	81	93.981	ENSDARG00000041878	rab11ba	99	93.981	Danio_rerio
ENSORLG00015016946	rab11ba	81	96.296	ENSDNOG00000014618	RAB11B	96	96.296	Dasypus_novemcinctus
ENSORLG00015016946	rab11ba	81	94.444	ENSDNOG00000004134	-	99	94.444	Dasypus_novemcinctus
ENSORLG00015016946	rab11ba	81	96.296	ENSDORG00000006304	Rab11b	99	96.296	Dipodomys_ordii
ENSORLG00015016946	rab11ba	81	92.130	ENSEBUG00000011775	rab11ba	98	92.118	Eptatretus_burgeri
ENSORLG00015016946	rab11ba	81	81.481	ENSEBUG00000015447	-	99	81.481	Eptatretus_burgeri
ENSORLG00015016946	rab11ba	54	100.000	ENSEEUG00000009165	-	100	100.000	Erinaceus_europaeus
ENSORLG00015016946	rab11ba	73	92.268	ENSELUG00000019240	-	99	92.268	Esox_lucius
ENSORLG00015016946	rab11ba	81	95.833	ENSFCAG00000015216	RAB11B	99	95.833	Felis_catus
ENSORLG00015016946	rab11ba	81	95.833	ENSFDAG00000019872	RAB11B	99	95.833	Fukomys_damarensis
ENSORLG00015016946	rab11ba	81	98.148	ENSFHEG00000022642	rab11ba	99	98.148	Fundulus_heteroclitus
ENSORLG00015016946	rab11ba	81	93.981	ENSGMOG00000007390	rab11ba	99	93.981	Gadus_morhua
ENSORLG00015016946	rab11ba	81	98.611	ENSGAFG00000005679	rab11ba	99	98.611	Gambusia_affinis
ENSORLG00015016946	rab11ba	81	96.296	ENSGAGG00000012557	-	99	96.296	Gopherus_agassizii
ENSORLG00015016946	rab11ba	81	96.296	ENSHGLG00000014984	RAB11B	99	96.296	Heterocephalus_glaber_female
ENSORLG00015016946	rab11ba	81	96.296	ENSHGLG00100003638	RAB11B	99	96.296	Heterocephalus_glaber_male
ENSORLG00015016946	rab11ba	81	96.296	ENSSTOG00000031571	RAB11B	99	96.296	Ictidomys_tridecemlineatus
ENSORLG00015016946	rab11ba	81	96.296	ENSJJAG00000018891	Rab11b	99	96.296	Jaculus_jaculus
ENSORLG00015016946	rab11ba	81	99.074	ENSKMAG00000006082	-	99	99.074	Kryptolebias_marmoratus
ENSORLG00015016946	rab11ba	86	90.909	ENSLBEG00000006087	rab11ba	99	95.370	Labrus_bergylta
ENSORLG00015016946	rab11ba	64	98.824	ENSLACG00000016974	RAB11B	99	98.824	Latimeria_chalumnae
ENSORLG00015016946	rab11ba	81	96.296	ENSLAFG00000013598	RAB11B	99	96.296	Loxodonta_africana
ENSORLG00015016946	rab11ba	81	96.296	ENSMNEG00000039759	-	99	96.296	Macaca_nemestrina
ENSORLG00015016946	rab11ba	81	97.685	ENSMAMG00000018556	rab11ba	99	97.685	Mastacembelus_armatus
ENSORLG00015016946	rab11ba	81	96.296	ENSMZEG00005010947	rab11ba	99	96.296	Maylandia_zebra
ENSORLG00015016946	rab11ba	76	88.177	ENSMZEG00005019251	-	92	88.177	Maylandia_zebra
ENSORLG00015016946	rab11ba	81	96.296	ENSMAUG00000021579	Rab11b	99	96.296	Mesocricetus_auratus
ENSORLG00015016946	rab11ba	81	95.833	ENSMOCG00000012667	Rab11b	99	95.833	Microtus_ochrogaster
ENSORLG00015016946	rab11ba	81	94.444	ENSMALG00000021949	rab11ba	99	94.444	Monopterus_albus
ENSORLG00015016946	rab11ba	81	96.296	MGP_CAROLIEiJ_G0021415	Rab11b	99	97.973	Mus_caroli
ENSORLG00015016946	rab11ba	81	96.759	ENSMUSG00000077450	Rab11b	99	97.973	Mus_musculus
ENSORLG00015016946	rab11ba	81	96.296	MGP_PahariEiJ_G0020420	Rab11b	99	96.296	Mus_pahari
ENSORLG00015016946	rab11ba	81	96.296	MGP_SPRETEiJ_G0022327	Rab11b	99	97.973	Mus_spretus
ENSORLG00015016946	rab11ba	81	95.833	ENSMPUG00000007263	RAB11B	99	95.833	Mustela_putorius_furo
ENSORLG00015016946	rab11ba	81	91.781	ENSMLUG00000002308	-	99	91.781	Myotis_lucifugus
ENSORLG00015016946	rab11ba	81	96.296	ENSNGAG00000015757	Rab11b	99	96.296	Nannospalax_galili
ENSORLG00015016946	rab11ba	81	96.759	ENSNBRG00000023898	rab11ba	83	96.759	Neolamprologus_brichardi
ENSORLG00015016946	rab11ba	81	96.296	ENSNLEG00000001733	RAB11B	99	96.296	Nomascus_leucogenys
ENSORLG00015016946	rab11ba	81	96.296	ENSODEG00000011371	RAB11B	99	96.296	Octodon_degus
ENSORLG00015016946	rab11ba	81	97.222	ENSONIG00000002535	rab11ba	99	97.222	Oreochromis_niloticus
ENSORLG00015016946	rab11ba	61	97.516	ENSOCUG00000028208	RAB11B	64	97.516	Oryctolagus_cuniculus
ENSORLG00015016946	rab11ba	81	100.000	ENSORLG00000015307	rab11ba	99	100.000	Oryzias_latipes
ENSORLG00015016946	rab11ba	81	100.000	ENSORLG00020020816	rab11ba	99	100.000	Oryzias_latipes_hni
ENSORLG00015016946	rab11ba	81	100.000	ENSOMEG00000002581	rab11ba	99	100.000	Oryzias_melastigma
ENSORLG00015016946	rab11ba	81	96.296	ENSOGAG00000003227	RAB11B	98	96.296	Otolemur_garnettii
ENSORLG00015016946	rab11ba	81	96.296	ENSOARG00000003801	RAB11B	96	96.296	Ovis_aries
ENSORLG00015016946	rab11ba	65	97.701	ENSPPRG00000010160	RAB11B	85	97.701	Panthera_pardus
ENSORLG00015016946	rab11ba	81	96.296	ENSPEMG00000014536	Rab11b	99	96.296	Peromyscus_maniculatus_bairdii
ENSORLG00015016946	rab11ba	76	80.769	ENSPMAG00000009335	-	99	80.769	Petromyzon_marinus
ENSORLG00015016946	rab11ba	81	99.074	ENSPFOG00000006159	rab11ba	99	99.074	Poecilia_formosa
ENSORLG00015016946	rab11ba	81	99.074	ENSPLAG00000014243	rab11ba	99	99.074	Poecilia_latipinna
ENSORLG00015016946	rab11ba	81	99.074	ENSPMEG00000007917	rab11ba	74	99.074	Poecilia_mexicana
ENSORLG00015016946	rab11ba	81	99.074	ENSPREG00000006357	rab11ba	77	99.074	Poecilia_reticulata
ENSORLG00015016946	rab11ba	81	96.296	ENSPPYG00000009504	RAB11B	99	96.296	Pongo_abelii
ENSORLG00015016946	rab11ba	81	87.500	ENSPCAG00000016118	RAB11B	99	87.500	Procavia_capensis
ENSORLG00015016946	rab11ba	81	96.296	ENSPCOG00000028053	RAB11B	99	96.296	Propithecus_coquereli
ENSORLG00015016946	rab11ba	55	97.945	ENSPCOG00000008655	-	100	97.945	Propithecus_coquereli
ENSORLG00015016946	rab11ba	81	96.296	ENSPVAG00000009645	RAB11B	99	96.296	Pteropus_vampyrus
ENSORLG00015016946	rab11ba	81	96.296	ENSPNYG00000019644	rab11ba	99	96.296	Pundamilia_nyererei
ENSORLG00015016946	rab11ba	82	74.888	ENSPNYG00000023810	-	90	79.024	Pundamilia_nyererei
ENSORLG00015016946	rab11ba	81	95.833	ENSPNAG00000006431	-	99	95.833	Pygocentrus_nattereri
ENSORLG00015016946	rab11ba	89	88.655	ENSPNAG00000020475	rab11ba	99	95.370	Pygocentrus_nattereri
ENSORLG00015016946	rab11ba	81	96.296	ENSRNOG00000007648	Rab11b	99	96.296	Rattus_norvegicus
ENSORLG00015016946	rab11ba	81	96.296	ENSSBOG00000035094	RAB11B	99	96.296	Saimiri_boliviensis_boliviensis
ENSORLG00015016946	rab11ba	81	99.074	ENSSDUG00000002965	rab11ba	99	99.074	Seriola_dumerili
ENSORLG00015016946	rab11ba	81	99.074	ENSSLDG00000005221	rab11ba	99	99.074	Seriola_lalandi_dorsalis
ENSORLG00015016946	rab11ba	81	97.222	ENSSPAG00000017313	rab11ba	99	97.222	Stegastes_partitus
ENSORLG00015016946	rab11ba	81	96.296	ENSSSCG00000013600	RAB11B	99	96.296	Sus_scrofa
ENSORLG00015016946	rab11ba	81	96.296	ENSTTRG00000009758	RAB11B	99	96.296	Tursiops_truncatus
ENSORLG00015016946	rab11ba	71	84.043	ENSUMAG00000014594	RAB11B	96	77.451	Ursus_maritimus
ENSORLG00015016946	rab11ba	81	96.296	ENSVVUG00000025210	RAB11B	99	96.296	Vulpes_vulpes
ENSORLG00015016946	rab11ba	81	94.907	ENSXETG00000021890	rab11b.2	98	94.907	Xenopus_tropicalis
ENSORLG00015016946	rab11ba	50	97.744	ENSXCOG00000009194	-	98	97.744	Xiphophorus_couchianus
ENSORLG00015016946	rab11ba	81	98.611	ENSXMAG00000013416	rab11ba	99	98.611	Xiphophorus_maculatus