EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015016970 (Gene tree)
Gene ID: -
Gene Symbol: utp23
Alias: -
Full Name: UTP23%2C small subunit (SSU) processome component%2C homolog (yeast)
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 4581 bases
Position: chr11:4279712-4284292
Accession: ZDB-GENE-050417-353
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015032259	Fcf1	PF04900.12	3.8e-29	1	1
ENSORLP00015016015	Fcf1	PF04900.12	3.9e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015024267	-	1776	-	ENSORLP00015032259	255 (aa)	-	-
ENSORLT00015024098	-	771	-	ENSORLP00015016015	256 (aa)	-	-

Gene Model

Click here to download ENSORLG00015016970's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015016970's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015016970	utp23	84	62.150	ENSG00000147679	UTP23	96	66.667	Homo_sapiens
ENSORLG00015016970	utp23	62	77.358	ENSAPOG00000004608	-	89	74.074	Acanthochromis_polyacanthus
ENSORLG00015016970	utp23	87	80.631	ENSAPOG00000004620	utp23	100	77.778	Acanthochromis_polyacanthus
ENSORLG00015016970	utp23	54	31.655	ENSAPOG00000010473	fcf1	69	31.655	Acanthochromis_polyacanthus
ENSORLG00015016970	utp23	63	77.500	ENSAPOG00000013233	UTP23	80	74.603	Acanthochromis_polyacanthus
ENSORLG00015016970	utp23	82	61.722	ENSAMEG00000010317	UTP23	94	59.494	Ailuropoda_melanoleuca
ENSORLG00015016970	utp23	100	81.008	ENSACIG00000013638	utp23	97	83.721	Amphilophus_citrinellus
ENSORLG00015016970	utp23	90	81.659	ENSAOCG00000016307	utp23	99	79.283	Amphiprion_ocellaris
ENSORLG00015016970	utp23	54	30.935	ENSAOCG00000003752	fcf1	69	30.935	Amphiprion_ocellaris
ENSORLG00015016970	utp23	54	30.935	ENSAPEG00000011644	fcf1	74	31.159	Amphiprion_percula
ENSORLG00015016970	utp23	90	81.739	ENSAPEG00000018976	utp23	97	80.408	Amphiprion_percula
ENSORLG00015016970	utp23	99	89.804	ENSATEG00000007509	utp23	100	89.804	Anabas_testudineus
ENSORLG00015016970	utp23	85	65.278	ENSACAG00000011061	UTP23	96	60.905	Anolis_carolinensis
ENSORLG00015016970	utp23	84	61.682	ENSANAG00000036252	-	97	55.906	Aotus_nancymaae
ENSORLG00015016970	utp23	84	61.682	ENSANAG00000025273	-	100	55.906	Aotus_nancymaae
ENSORLG00015016970	utp23	99	67.589	ENSAMXG00000020989	utp23	98	66.929	Astyanax_mexicanus
ENSORLG00015016970	utp23	84	62.617	ENSBTAG00000040422	UTP23	100	56.522	Bos_taurus
ENSORLG00015016970	utp23	50	32.031	WBGene00009266	F30A10.9	63	32.031	Caenorhabditis_elegans
ENSORLG00015016970	utp23	60	44.872	WBGene00016411	C34E10.10	67	44.872	Caenorhabditis_elegans
ENSORLG00015016970	utp23	84	61.682	ENSCJAG00000005903	UTP23	94	59.072	Callithrix_jacchus
ENSORLG00015016970	utp23	82	62.679	ENSCAFG00000000821	UTP23	95	60.338	Canis_familiaris
ENSORLG00015016970	utp23	82	62.679	ENSCAFG00020004174	UTP23	95	60.338	Canis_lupus_dingo
ENSORLG00015016970	utp23	84	63.084	ENSCHIG00000019828	UTP23	100	56.917	Capra_hircus
ENSORLG00015016970	utp23	86	60.909	ENSTSYG00000001644	UTP23	94	58.650	Carlito_syrichta
ENSORLG00015016970	utp23	84	62.617	ENSCPOG00000034561	UTP23	93	57.087	Cavia_porcellus
ENSORLG00015016970	utp23	82	61.722	ENSCCAG00000030228	UTP23	100	57.087	Cebus_capucinus
ENSORLG00015016970	utp23	84	61.682	ENSCATG00000035129	UTP23	94	59.072	Cercocebus_atys
ENSORLG00015016970	utp23	82	54.067	ENSCLAG00000000531	-	91	54.067	Chinchilla_lanigera
ENSORLG00015016970	utp23	82	60.766	ENSCLAG00000005108	-	100	56.349	Chinchilla_lanigera
ENSORLG00015016970	utp23	84	61.682	ENSCSAG00000010933	UTP23	94	59.072	Chlorocebus_sabaeus
ENSORLG00015016970	utp23	82	62.201	ENSCHOG00000003145	UTP23	94	59.916	Choloepus_hoffmanni
ENSORLG00015016970	utp23	84	64.953	ENSCPBG00000001634	UTP23	95	60.251	Chrysemys_picta_bellii
ENSORLG00015016970	utp23	82	52.830	ENSCING00000012577	-	94	49.282	Ciona_intestinalis
ENSORLG00015016970	utp23	54	32.857	ENSCING00000018434	-	62	34.375	Ciona_intestinalis
ENSORLG00015016970	utp23	54	32.857	ENSCSAVG00000004997	-	72	32.857	Ciona_savignyi
ENSORLG00015016970	utp23	82	52.857	ENSCSAVG00000003273	-	95	50.952	Ciona_savignyi
ENSORLG00015016970	utp23	84	62.150	ENSCANG00000028461	UTP23	87	59.072	Colobus_angolensis_palliatus
ENSORLG00015016970	utp23	82	61.244	ENSCGRG00001005218	Utp23	94	59.494	Cricetulus_griseus_chok1gshd
ENSORLG00015016970	utp23	97	82.591	ENSCSEG00000011409	utp23	95	82.591	Cynoglossus_semilaevis
ENSORLG00015016970	utp23	100	83.203	ENSCVAG00000003180	utp23	99	83.203	Cyprinodon_variegatus
ENSORLG00015016970	utp23	54	34.043	ENSDARG00000102333	fcf1	69	34.043	Danio_rerio
ENSORLG00015016970	utp23	87	80.995	ENSDARG00000105012	utp23	98	76.078	Danio_rerio
ENSORLG00015016970	utp23	82	62.679	ENSDNOG00000033602	UTP23	94	60.338	Dasypus_novemcinctus
ENSORLG00015016970	utp23	82	54.545	ENSDORG00000029054	-	77	53.110	Dipodomys_ordii
ENSORLG00015016970	utp23	82	46.635	FBgn0031361	CG17652	83	46.635	Drosophila_melanogaster
ENSORLG00015016970	utp23	55	30.282	FBgn0010520	Bka	69	30.282	Drosophila_melanogaster
ENSORLG00015016970	utp23	93	58.475	ENSETEG00000015401	-	94	58.475	Echinops_telfairi
ENSORLG00015016970	utp23	87	44.796	ENSETEG00000017109	-	73	46.995	Echinops_telfairi
ENSORLG00015016970	utp23	84	53.271	ENSEBUG00000009876	utp23	90	52.153	Eptatretus_burgeri
ENSORLG00015016970	utp23	82	62.679	ENSEASG00005023141	UTP23	94	59.494	Equus_asinus_asinus
ENSORLG00015016970	utp23	82	62.201	ENSECAG00000026844	UTP23	94	59.916	Equus_caballus
ENSORLG00015016970	utp23	84	63.084	ENSEEUG00000004503	UTP23	94	59.916	Erinaceus_europaeus
ENSORLG00015016970	utp23	98	75.697	ENSELUG00000005602	utp23	99	77.778	Esox_lucius
ENSORLG00015016970	utp23	84	62.150	ENSFCAG00000036051	UTP23	95	59.072	Felis_catus
ENSORLG00015016970	utp23	82	59.809	ENSFALG00000002299	UTP23	96	54.217	Ficedula_albicollis
ENSORLG00015016970	utp23	82	61.244	ENSFDAG00000021034	UTP23	100	56.917	Fukomys_damarensis
ENSORLG00015016970	utp23	99	83.137	ENSFHEG00000008581	utp23	100	85.098	Fundulus_heteroclitus
ENSORLG00015016970	utp23	95	73.029	ENSGMOG00000015495	utp23	100	72.614	Gadus_morhua
ENSORLG00015016970	utp23	84	62.150	ENSGALG00000032400	UTP23	93	56.017	Gallus_gallus
ENSORLG00015016970	utp23	90	90.043	ENSGAFG00000002063	utp23	98	86.275	Gambusia_affinis
ENSORLG00015016970	utp23	98	77.200	ENSGACG00000002979	utp23	99	78.000	Gasterosteus_aculeatus
ENSORLG00015016970	utp23	84	62.150	ENSGGOG00000013203	UTP23	94	59.494	Gorilla_gorilla
ENSORLG00015016970	utp23	99	83.137	ENSHBUG00000023376	utp23	100	85.882	Haplochromis_burtoni
ENSORLG00015016970	utp23	82	57.895	ENSHGLG00000020901	-	93	54.150	Heterocephalus_glaber_female
ENSORLG00015016970	utp23	82	60.766	ENSHGLG00000004025	UTP23	100	56.522	Heterocephalus_glaber_female
ENSORLG00015016970	utp23	81	53.140	ENSHGLG00000008717	-	100	47.826	Heterocephalus_glaber_female
ENSORLG00015016970	utp23	82	60.766	ENSHGLG00100018875	UTP23	100	56.522	Heterocephalus_glaber_male
ENSORLG00015016970	utp23	80	52.683	ENSHGLG00100012817	-	93	53.589	Heterocephalus_glaber_male
ENSORLG00015016970	utp23	98	77.689	ENSHCOG00000007006	utp23	98	80.738	Hippocampus_comes
ENSORLG00015016970	utp23	84	77.103	ENSIPUG00000014437	utp23	94	70.902	Ictalurus_punctatus
ENSORLG00015016970	utp23	82	62.201	ENSSTOG00000001411	UTP23	100	57.312	Ictidomys_tridecemlineatus
ENSORLG00015016970	utp23	90	88.210	ENSKMAG00000002262	utp23	100	83.658	Kryptolebias_marmoratus
ENSORLG00015016970	utp23	54	30.935	ENSLBEG00000000146	fcf1	69	30.935	Labrus_bergylta
ENSORLG00015016970	utp23	99	81.992	ENSLBEG00000012819	utp23	100	82.375	Labrus_bergylta
ENSORLG00015016970	utp23	87	69.231	ENSLACG00000014611	UTP23	94	63.713	Latimeria_chalumnae
ENSORLG00015016970	utp23	95	68.050	ENSLOCG00000003289	utp23	93	68.880	Lepisosteus_oculatus
ENSORLG00015016970	utp23	93	58.650	ENSLAFG00000001282	UTP23	94	58.650	Loxodonta_africana
ENSORLG00015016970	utp23	84	62.150	ENSMFAG00000003374	UTP23	94	59.494	Macaca_fascicularis
ENSORLG00015016970	utp23	84	62.150	ENSMMUG00000020284	UTP23	94	59.494	Macaca_mulatta
ENSORLG00015016970	utp23	84	62.150	ENSMNEG00000028668	UTP23	94	59.494	Macaca_nemestrina
ENSORLG00015016970	utp23	84	62.150	ENSMLEG00000032668	UTP23	88	59.494	Mandrillus_leucophaeus
ENSORLG00015016970	utp23	99	87.795	ENSMAMG00000003259	utp23	100	87.795	Mastacembelus_armatus
ENSORLG00015016970	utp23	99	83.137	ENSMZEG00005026398	utp23	100	85.882	Maylandia_zebra
ENSORLG00015016970	utp23	92	59.402	ENSMGAG00000012472	UTP23	95	57.384	Meleagris_gallopavo
ENSORLG00015016970	utp23	82	62.679	ENSMICG00000034720	UTP23	96	59.751	Microcebus_murinus
ENSORLG00015016970	utp23	90	85.153	ENSMMOG00000014498	utp23	100	83.071	Mola_mola
ENSORLG00015016970	utp23	84	62.150	ENSMODG00000004140	UTP23	99	54.902	Monodelphis_domestica
ENSORLG00015016970	utp23	98	87.698	ENSMALG00000010867	utp23	98	89.344	Monopterus_albus
ENSORLG00015016970	utp23	82	58.852	MGP_CAROLIEiJ_G0019781	Utp23	94	56.962	Mus_caroli
ENSORLG00015016970	utp23	82	59.809	ENSMUSG00000022313	Utp23	94	57.806	Mus_musculus
ENSORLG00015016970	utp23	82	59.330	MGP_SPRETEiJ_G0020678	Utp23	91	57.384	Mus_spretus
ENSORLG00015016970	utp23	85	61.927	ENSMPUG00000000987	UTP23	95	58.921	Mustela_putorius_furo
ENSORLG00015016970	utp23	82	61.244	ENSMLUG00000004345	UTP23	99	56.680	Myotis_lucifugus
ENSORLG00015016970	utp23	99	83.922	ENSNBRG00000012946	utp23	100	86.667	Neolamprologus_brichardi
ENSORLG00015016970	utp23	84	61.215	ENSNLEG00000032995	UTP23	87	58.650	Nomascus_leucogenys
ENSORLG00015016970	utp23	84	63.084	ENSMEUG00000001566	UTP23	89	61.244	Notamacropus_eugenii
ENSORLG00015016970	utp23	86	60.731	ENSOPRG00000011227	UTP23	94	58.298	Ochotona_princeps
ENSORLG00015016970	utp23	99	54.941	ENSODEG00000018881	-	100	54.941	Octodon_degus
ENSORLG00015016970	utp23	79	80.296	ENSONIG00000013525	utp23	100	83.744	Oreochromis_niloticus
ENSORLG00015016970	utp23	89	47.577	ENSOANG00000004878	UTP23	93	48.018	Ornithorhynchus_anatinus
ENSORLG00015016970	utp23	84	61.682	ENSOCUG00000007541	UTP23	94	58.650	Oryctolagus_cuniculus
ENSORLG00015016970	utp23	100	98.824	ENSORLG00000001784	utp23	100	98.824	Oryzias_latipes
ENSORLG00015016970	utp23	100	98.431	ENSORLG00020009731	utp23	100	98.431	Oryzias_latipes_hni
ENSORLG00015016970	utp23	99	93.281	ENSOMEG00000008767	utp23	99	93.281	Oryzias_melastigma
ENSORLG00015016970	utp23	51	52.713	ENSOGAG00000033060	-	88	53.077	Otolemur_garnettii
ENSORLG00015016970	utp23	82	62.679	ENSOGAG00000017024	UTP23	95	60.669	Otolemur_garnettii
ENSORLG00015016970	utp23	84	63.084	ENSOARG00000010483	UTP23	100	56.917	Ovis_aries
ENSORLG00015016970	utp23	84	62.150	ENSPPAG00000028660	UTP23	94	59.072	Pan_paniscus
ENSORLG00015016970	utp23	84	62.150	ENSPPRG00000024902	UTP23	95	59.072	Panthera_pardus
ENSORLG00015016970	utp23	84	62.150	ENSPTIG00000019925	UTP23	95	59.072	Panthera_tigris_altaica
ENSORLG00015016970	utp23	84	62.150	ENSPTRG00000020521	UTP23	87	59.494	Pan_troglodytes
ENSORLG00015016970	utp23	84	62.150	ENSPANG00000011559	UTP23	94	59.494	Papio_anubis
ENSORLG00015016970	utp23	92	76.170	ENSPKIG00000018790	utp23	99	75.210	Paramormyrops_kingsleyae
ENSORLG00015016970	utp23	84	64.953	ENSPSIG00000013132	UTP23	95	61.088	Pelodiscus_sinensis
ENSORLG00015016970	utp23	98	74.104	ENSPMGG00000019770	utp23	99	73.705	Periophthalmus_magnuspinnatus
ENSORLG00015016970	utp23	84	61.215	ENSPCIG00000018598	UTP23	92	56.432	Phascolarctos_cinereus
ENSORLG00015016970	utp23	99	83.922	ENSPFOG00000003590	utp23	100	83.922	Poecilia_formosa
ENSORLG00015016970	utp23	99	84.314	ENSPLAG00000017925	utp23	100	84.314	Poecilia_latipinna
ENSORLG00015016970	utp23	99	84.314	ENSPMEG00000006728	utp23	100	84.314	Poecilia_mexicana
ENSORLG00015016970	utp23	99	83.922	ENSPREG00000002478	utp23	100	83.922	Poecilia_reticulata
ENSORLG00015016970	utp23	84	62.617	ENSPPYG00000018831	UTP23	94	59.916	Pongo_abelii
ENSORLG00015016970	utp23	82	61.244	ENSPCAG00000009093	UTP23	94	58.577	Procavia_capensis
ENSORLG00015016970	utp23	82	61.244	ENSPVAG00000002661	UTP23	94	59.072	Pteropus_vampyrus
ENSORLG00015016970	utp23	99	82.745	ENSPNYG00000017636	utp23	100	85.098	Pundamilia_nyererei
ENSORLG00015016970	utp23	80	75.369	ENSPNAG00000024538	utp23	98	71.784	Pygocentrus_nattereri
ENSORLG00015016970	utp23	82	60.287	ENSRNOG00000004387	Utp23	96	57.676	Rattus_norvegicus
ENSORLG00015016970	utp23	84	62.150	ENSRBIG00000026267	UTP23	94	59.494	Rhinopithecus_bieti
ENSORLG00015016970	utp23	84	62.150	ENSRROG00000028593	UTP23	94	59.494	Rhinopithecus_roxellana
ENSORLG00015016970	utp23	82	62.201	ENSSBOG00000018914	UTP23	100	57.087	Saimiri_boliviensis_boliviensis
ENSORLG00015016970	utp23	60	57.516	ENSSHAG00000015399	UTP23	75	54.730	Sarcophilus_harrisii
ENSORLG00015016970	utp23	86	77.727	ENSSFOG00015009226	utp23	96	77.727	Scleropages_formosus
ENSORLG00015016970	utp23	54	30.216	ENSSMAG00000005119	fcf1	70	30.216	Scophthalmus_maximus
ENSORLG00015016970	utp23	99	83.594	ENSSMAG00000020390	utp23	100	83.203	Scophthalmus_maximus
ENSORLG00015016970	utp23	95	88.382	ENSSDUG00000020272	utp23	99	88.382	Seriola_dumerili
ENSORLG00015016970	utp23	95	88.382	ENSSLDG00000000393	utp23	99	88.382	Seriola_lalandi_dorsalis
ENSORLG00015016970	utp23	84	66.822	ENSSPUG00000011572	UTP23	94	63.675	Sphenodon_punctatus
ENSORLG00015016970	utp23	90	82.969	ENSSPAG00000013890	utp23	97	82.573	Stegastes_partitus
ENSORLG00015016970	utp23	87	61.712	ENSSSCG00000030493	UTP23	93	60.084	Sus_scrofa
ENSORLG00015016970	utp23	82	59.809	ENSTGUG00000012316	-	94	54.472	Taeniopygia_guttata
ENSORLG00015016970	utp23	82	58.852	ENSTGUG00000015403	-	98	54.357	Taeniopygia_guttata
ENSORLG00015016970	utp23	93	78.008	ENSTRUG00000023365	utp23	94	78.008	Takifugu_rubripes
ENSORLG00015016970	utp23	80	60.488	ENSTBEG00000008655	UTP23	83	60.488	Tupaia_belangeri
ENSORLG00015016970	utp23	84	62.617	ENSTTRG00000015295	UTP23	100	56.522	Tursiops_truncatus
ENSORLG00015016970	utp23	82	61.244	ENSUMAG00000020439	UTP23	94	59.072	Ursus_maritimus
ENSORLG00015016970	utp23	84	61.215	ENSVPAG00000009358	UTP23	94	58.228	Vicugna_pacos
ENSORLG00015016970	utp23	82	62.679	ENSVVUG00000015307	UTP23	95	60.338	Vulpes_vulpes
ENSORLG00015016970	utp23	82	61.244	ENSXETG00000020781	utp23	96	59.244	Xenopus_tropicalis
ENSORLG00015016970	utp23	99	85.098	ENSXCOG00000019504	utp23	100	85.098	Xiphophorus_couchianus
ENSORLG00015016970	utp23	99	84.314	ENSXMAG00000014058	utp23	100	84.314	Xiphophorus_maculatus