EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015016984 (Gene tree)
Gene ID: -
Gene Symbol: mrpl42
Alias: -
Full Name: mitochondrial ribosomal protein L42
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 3668 bases
Position: chr23:13306200-13309867
Accession: ZDB-GENE-101014-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015016032	MRP-S32	PF10210.9	5.4e-33	1	1
ENSORLP00015016046	MRP-S32	PF10210.9	8e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015024124	-	947	-	ENSORLP00015016046	168 (aa)	-	-
ENSORLT00015024118	-	764	-	ENSORLP00015016032	144 (aa)	-	-

Gene Model

Click here to download ENSORLG00015016984's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015016984's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015016984	mrpl42	100	70.548	ENSAPOG00000010677	mrpl42	100	70.548	Acanthochromis_polyacanthus
ENSORLG00015016984	mrpl42	100	72.414	ENSAOCG00000011620	mrpl42	100	72.414	Amphiprion_ocellaris
ENSORLG00015016984	mrpl42	100	73.103	ENSAPEG00000019516	mrpl42	100	73.103	Amphiprion_percula
ENSORLG00015016984	mrpl42	90	70.992	ENSATEG00000014106	mrpl42	100	70.992	Anabas_testudineus
ENSORLG00015016984	mrpl42	67	71.134	ENSACAG00000012606	MRPL42	66	71.134	Anolis_carolinensis
ENSORLG00015016984	mrpl42	100	70.139	ENSACLG00000026856	mrpl42	100	70.139	Astatotilapia_calliptera
ENSORLG00015016984	mrpl42	67	56.701	ENSAMXG00000035149	mrpl42	71	56.701	Astyanax_mexicanus
ENSORLG00015016984	mrpl42	99	64.336	ENSCSEG00000010067	mrpl42	98	64.336	Cynoglossus_semilaevis
ENSORLG00015016984	mrpl42	100	71.034	ENSCVAG00000002612	mrpl42	100	71.034	Cyprinodon_variegatus
ENSORLG00015016984	mrpl42	100	54.110	ENSDARG00000079391	mrpl42	100	54.110	Danio_rerio
ENSORLG00015016984	mrpl42	66	47.059	ENSEBUG00000005581	mrpl42	76	48.039	Eptatretus_burgeri
ENSORLG00015016984	mrpl42	98	62.676	ENSELUG00000001973	mrpl42	97	62.676	Esox_lucius
ENSORLG00015016984	mrpl42	100	65.517	ENSFHEG00000018696	mrpl42	100	65.517	Fundulus_heteroclitus
ENSORLG00015016984	mrpl42	67	76.289	ENSGMOG00000002972	mrpl42	100	76.289	Gadus_morhua
ENSORLG00015016984	mrpl42	100	66.897	ENSGAFG00000018373	mrpl42	100	66.897	Gambusia_affinis
ENSORLG00015016984	mrpl42	66	82.292	ENSGACG00000018811	mrpl42	99	82.292	Gasterosteus_aculeatus
ENSORLG00015016984	mrpl42	100	68.750	ENSHBUG00000015960	mrpl42	100	68.750	Haplochromis_burtoni
ENSORLG00015016984	mrpl42	100	62.069	ENSHCOG00000014046	mrpl42	100	62.069	Hippocampus_comes
ENSORLG00015016984	mrpl42	79	48.905	ENSIPUG00000015395	mrpl42	92	48.905	Ictalurus_punctatus
ENSORLG00015016984	mrpl42	100	69.655	ENSKMAG00000013671	mrpl42	100	69.655	Kryptolebias_marmoratus
ENSORLG00015016984	mrpl42	100	68.276	ENSLBEG00000028618	mrpl42	99	68.276	Labrus_bergylta
ENSORLG00015016984	mrpl42	100	68.966	ENSMAMG00000009737	mrpl42	100	68.966	Mastacembelus_armatus
ENSORLG00015016984	mrpl42	100	70.139	ENSMZEG00005008545	mrpl42	96	70.139	Maylandia_zebra
ENSORLG00015016984	mrpl42	72	69.231	ENSMMOG00000002317	mrpl42	70	67.290	Mola_mola
ENSORLG00015016984	mrpl42	100	61.290	ENSMALG00000015794	mrpl42	96	61.290	Monopterus_albus
ENSORLG00015016984	mrpl42	100	68.750	ENSNBRG00000003307	mrpl42	100	68.750	Neolamprologus_brichardi
ENSORLG00015016984	mrpl42	100	68.750	ENSONIG00000011753	mrpl42	100	68.750	Oreochromis_niloticus
ENSORLG00015016984	mrpl42	86	46.575	ENSOANG00000019984	-	90	46.575	Ornithorhynchus_anatinus
ENSORLG00015016984	mrpl42	100	95.172	ENSORLG00000013500	mrpl42	85	95.172	Oryzias_latipes
ENSORLG00015016984	mrpl42	100	95.862	ENSORLG00020000548	mrpl42	100	95.862	Oryzias_latipes_hni
ENSORLG00015016984	mrpl42	100	86.207	ENSOMEG00000010700	mrpl42	100	86.207	Oryzias_melastigma
ENSORLG00015016984	mrpl42	100	60.135	ENSPKIG00000025457	mrpl42	100	60.135	Paramormyrops_kingsleyae
ENSORLG00015016984	mrpl42	85	65.600	ENSPMGG00000019705	mrpl42	89	65.600	Periophthalmus_magnuspinnatus
ENSORLG00015016984	mrpl42	67	55.000	ENSPMAG00000008091	mrpl42	65	55.000	Petromyzon_marinus
ENSORLG00015016984	mrpl42	100	65.517	ENSPFOG00000016539	mrpl42	99	65.517	Poecilia_formosa
ENSORLG00015016984	mrpl42	100	66.207	ENSPLAG00000001255	mrpl42	100	66.207	Poecilia_latipinna
ENSORLG00015016984	mrpl42	100	65.517	ENSPMEG00000016462	mrpl42	100	65.517	Poecilia_mexicana
ENSORLG00015016984	mrpl42	92	66.165	ENSPREG00000012053	mrpl42	96	66.165	Poecilia_reticulata
ENSORLG00015016984	mrpl42	100	70.139	ENSPNYG00000009586	mrpl42	100	70.139	Pundamilia_nyererei
ENSORLG00015016984	mrpl42	67	64.948	ENSPNAG00000020753	mrpl42	67	64.948	Pygocentrus_nattereri
ENSORLG00015016984	mrpl42	100	68.966	ENSSMAG00000000262	mrpl42	100	68.966	Scophthalmus_maximus
ENSORLG00015016984	mrpl42	100	70.345	ENSSDUG00000005949	mrpl42	100	70.345	Seriola_dumerili
ENSORLG00015016984	mrpl42	100	69.655	ENSSLDG00000010159	mrpl42	100	69.655	Seriola_lalandi_dorsalis
ENSORLG00015016984	mrpl42	100	66.207	ENSTRUG00000025949	mrpl42	99	66.207	Takifugu_rubripes
ENSORLG00015016984	mrpl42	67	63.542	ENSXETG00000032902	mrpl42	78	63.542	Xenopus_tropicalis
ENSORLG00015016984	mrpl42	100	64.138	ENSXCOG00000013875	mrpl42	98	64.138	Xiphophorus_couchianus