EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015017116 (Gene tree)
Gene ID: -
Gene Symbol: sf3a2
Alias: -
Full Name: splicing factor 3a%2C subunit 2
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 4084 bases
Position: chr17:23370296-23374379
Accession: ZDB-GENE-040426-897
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015032339	zf-met	PF12874.7	4.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015024251	-	3066	-	ENSORLP00015032339	291 (aa)	-	-

Gene Model

Click here to download ENSORLG00015017116's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015017116's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015017116	sf3a2	74	94.444	ENSG00000104897	SF3A2	100	94.815	Homo_sapiens
ENSORLG00015017116	sf3a2	82	92.887	ENSAPOG00000003916	sf3a2	99	89.796	Acanthochromis_polyacanthus
ENSORLG00015017116	sf3a2	74	94.444	ENSAMEG00000005469	SF3A2	52	89.583	Ailuropoda_melanoleuca
ENSORLG00015017116	sf3a2	82	94.142	ENSACIG00000018153	sf3a2	99	91.065	Amphilophus_citrinellus
ENSORLG00015017116	sf3a2	82	93.305	ENSAOCG00000015960	sf3a2	99	90.136	Amphiprion_ocellaris
ENSORLG00015017116	sf3a2	82	93.305	ENSAPEG00000012336	sf3a2	99	90.136	Amphiprion_percula
ENSORLG00015017116	sf3a2	82	93.305	ENSATEG00000015449	sf3a2	99	89.796	Anabas_testudineus
ENSORLG00015017116	sf3a2	64	94.054	ENSANAG00000034031	-	89	94.054	Aotus_nancymaae
ENSORLG00015017116	sf3a2	88	90.661	ENSACLG00000002356	sf3a2	99	90.068	Astatotilapia_calliptera
ENSORLG00015017116	sf3a2	82	92.469	ENSAMXG00000032428	sf3a2	79	92.469	Astyanax_mexicanus
ENSORLG00015017116	sf3a2	74	94.444	ENSBTAG00000025452	SF3A2	50	89.583	Bos_taurus
ENSORLG00015017116	sf3a2	76	79.545	WBGene00008683	repo-1	99	79.545	Caenorhabditis_elegans
ENSORLG00015017116	sf3a2	74	94.444	ENSCJAG00000013206	-	52	89.583	Callithrix_jacchus
ENSORLG00015017116	sf3a2	74	94.444	ENSCAFG00000019414	SF3A2	50	89.583	Canis_familiaris
ENSORLG00015017116	sf3a2	74	94.444	ENSCAFG00020018153	SF3A2	50	89.583	Canis_lupus_dingo
ENSORLG00015017116	sf3a2	74	94.444	ENSCHIG00000018323	SF3A2	50	89.583	Capra_hircus
ENSORLG00015017116	sf3a2	63	95.055	ENSCAPG00000003402	-	90	95.055	Cavia_aperea
ENSORLG00015017116	sf3a2	74	94.444	ENSCPOG00000032868	SF3A2	53	89.583	Cavia_porcellus
ENSORLG00015017116	sf3a2	74	94.444	ENSCCAG00000009812	SF3A2	87	94.595	Cebus_capucinus
ENSORLG00015017116	sf3a2	74	94.444	ENSCATG00000038453	SF3A2	52	89.583	Cercocebus_atys
ENSORLG00015017116	sf3a2	74	94.444	ENSCLAG00000008987	SF3A2	53	89.583	Chinchilla_lanigera
ENSORLG00015017116	sf3a2	74	94.444	ENSCSAG00000011717	SF3A2	51	89.583	Chlorocebus_sabaeus
ENSORLG00015017116	sf3a2	74	94.444	ENSCPBG00000018569	SF3A2	76	89.212	Chrysemys_picta_bellii
ENSORLG00015017116	sf3a2	84	78.776	ENSCING00000003319	zf(matrin)-2	85	67.450	Ciona_intestinalis
ENSORLG00015017116	sf3a2	74	85.581	ENSCSAVG00000007862	-	63	79.832	Ciona_savignyi
ENSORLG00015017116	sf3a2	74	94.444	ENSCANG00000024451	SF3A2	52	89.583	Colobus_angolensis_palliatus
ENSORLG00015017116	sf3a2	74	94.444	ENSCGRG00000011089	Sf3a2	94	95.055	Cricetulus_griseus_crigri
ENSORLG00015017116	sf3a2	89	89.615	ENSCSEG00000014308	sf3a2	85	90.871	Cynoglossus_semilaevis
ENSORLG00015017116	sf3a2	88	91.860	ENSCVAG00000021349	sf3a2	82	94.583	Cyprinodon_variegatus
ENSORLG00015017116	sf3a2	90	87.072	ENSDARG00000021107	sf3a2	85	92.887	Danio_rerio
ENSORLG00015017116	sf3a2	74	94.907	ENSDORG00000014445	Sf3a2	52	90.000	Dipodomys_ordii
ENSORLG00015017116	sf3a2	75	82.648	FBgn0036314	Sf3a2	85	79.574	Drosophila_melanogaster
ENSORLG00015017116	sf3a2	74	94.444	ENSEASG00005021972	SF3A2	52	89.583	Equus_asinus_asinus
ENSORLG00015017116	sf3a2	82	92.050	ENSELUG00000008471	sf3a2	88	89.552	Esox_lucius
ENSORLG00015017116	sf3a2	74	93.981	ENSFCAG00000030476	SF3A2	55	89.167	Felis_catus
ENSORLG00015017116	sf3a2	64	94.652	ENSFALG00000013785	-	62	81.780	Ficedula_albicollis
ENSORLG00015017116	sf3a2	63	95.055	ENSFDAG00000020911	-	93	95.055	Fukomys_damarensis
ENSORLG00015017116	sf3a2	82	96.234	ENSFHEG00000002392	sf3a2	91	93.633	Fundulus_heteroclitus
ENSORLG00015017116	sf3a2	82	92.887	ENSGMOG00000012186	sf3a2	89	90.672	Gadus_morhua
ENSORLG00015017116	sf3a2	74	94.907	ENSGALG00000021679	SF3A2	77	88.477	Gallus_gallus
ENSORLG00015017116	sf3a2	82	96.667	ENSGAFG00000008478	sf3a2	99	93.197	Gambusia_affinis
ENSORLG00015017116	sf3a2	82	93.305	ENSGACG00000015255	sf3a2	82	93.305	Gasterosteus_aculeatus
ENSORLG00015017116	sf3a2	58	94.118	ENSGAGG00000008500	SF3A2	72	87.692	Gopherus_agassizii
ENSORLG00015017116	sf3a2	74	94.444	ENSGGOG00000006613	SF3A2	52	89.583	Gorilla_gorilla
ENSORLG00015017116	sf3a2	88	90.661	ENSHBUG00000021796	sf3a2	99	90.068	Haplochromis_burtoni
ENSORLG00015017116	sf3a2	74	94.444	ENSHGLG00000015102	SF3A2	88	95.082	Heterocephalus_glaber_female
ENSORLG00015017116	sf3a2	74	94.444	ENSHGLG00100000418	SF3A2	88	95.082	Heterocephalus_glaber_male
ENSORLG00015017116	sf3a2	90	88.258	ENSHCOG00000001223	sf3a2	90	85.714	Hippocampus_comes
ENSORLG00015017116	sf3a2	82	91.213	ENSIPUG00000019071	sf3a2	80	91.213	Ictalurus_punctatus
ENSORLG00015017116	sf3a2	74	94.444	ENSSTOG00000007495	SF3A2	90	87.432	Ictidomys_tridecemlineatus
ENSORLG00015017116	sf3a2	74	94.444	ENSJJAG00000010635	Sf3a2	94	95.055	Jaculus_jaculus
ENSORLG00015017116	sf3a2	84	93.089	ENSKMAG00000006295	sf3a2	81	94.583	Kryptolebias_marmoratus
ENSORLG00015017116	sf3a2	88	91.506	ENSLBEG00000000677	sf3a2	99	90.136	Labrus_bergylta
ENSORLG00015017116	sf3a2	74	95.370	ENSLACG00000008744	SF3A2	77	89.212	Latimeria_chalumnae
ENSORLG00015017116	sf3a2	78	92.070	ENSLOCG00000005835	sf3a2	77	90.795	Lepisosteus_oculatus
ENSORLG00015017116	sf3a2	74	94.444	ENSMFAG00000002638	SF3A2	52	89.583	Macaca_fascicularis
ENSORLG00015017116	sf3a2	74	94.444	ENSMMUG00000010111	SF3A2	52	89.583	Macaca_mulatta
ENSORLG00015017116	sf3a2	74	94.444	ENSMNEG00000036916	SF3A2	51	89.583	Macaca_nemestrina
ENSORLG00015017116	sf3a2	82	92.469	ENSMAMG00000009881	sf3a2	99	90.476	Mastacembelus_armatus
ENSORLG00015017116	sf3a2	88	90.661	ENSMZEG00005025609	sf3a2	99	90.068	Maylandia_zebra
ENSORLG00015017116	sf3a2	74	94.907	ENSMGAG00000001950	SF3A2	77	88.477	Meleagris_gallopavo
ENSORLG00015017116	sf3a2	63	95.055	ENSMAUG00000005644	-	94	95.055	Mesocricetus_auratus
ENSORLG00015017116	sf3a2	74	94.444	ENSMICG00000015443	SF3A2	52	89.583	Microcebus_murinus
ENSORLG00015017116	sf3a2	74	94.444	ENSMOCG00000007216	Sf3a2	52	89.583	Microtus_ochrogaster
ENSORLG00015017116	sf3a2	94	81.159	ENSMMOG00000010657	sf3a2	85	84.167	Mola_mola
ENSORLG00015017116	sf3a2	82	94.142	ENSMALG00000020442	sf3a2	99	90.816	Monopterus_albus
ENSORLG00015017116	sf3a2	74	94.444	MGP_CAROLIEiJ_G0015602	-	94	95.055	Mus_caroli
ENSORLG00015017116	sf3a2	74	94.444	ENSMUSG00000020211	Sf3a2	94	95.055	Mus_musculus
ENSORLG00015017116	sf3a2	74	94.444	MGP_PahariEiJ_G0031015	-	94	95.055	Mus_pahari
ENSORLG00015017116	sf3a2	74	94.444	MGP_SPRETEiJ_G0016420	-	94	95.055	Mus_spretus
ENSORLG00015017116	sf3a2	74	93.981	ENSMPUG00000006956	SF3A2	52	89.167	Mustela_putorius_furo
ENSORLG00015017116	sf3a2	74	93.981	ENSMLUG00000004426	-	54	89.167	Myotis_lucifugus
ENSORLG00015017116	sf3a2	63	94.505	ENSNGAG00000023309	-	94	94.505	Nannospalax_galili
ENSORLG00015017116	sf3a2	85	90.688	ENSNBRG00000019872	sf3a2	99	89.726	Neolamprologus_brichardi
ENSORLG00015017116	sf3a2	64	93.048	ENSODEG00000013722	-	100	93.048	Octodon_degus
ENSORLG00015017116	sf3a2	82	93.305	ENSONIG00000010198	sf3a2	99	89.384	Oreochromis_niloticus
ENSORLG00015017116	sf3a2	70	93.171	ENSOANG00000013649	-	98	92.718	Ornithorhynchus_anatinus
ENSORLG00015017116	sf3a2	100	99.313	ENSORLG00000015301	sf3a2	100	99.313	Oryzias_latipes
ENSORLG00015017116	sf3a2	100	99.656	ENSORLG00020017235	sf3a2	100	99.656	Oryzias_latipes_hni
ENSORLG00015017116	sf3a2	100	95.533	ENSOMEG00000020860	sf3a2	100	95.533	Oryzias_melastigma
ENSORLG00015017116	sf3a2	74	94.444	ENSOGAG00000033389	SF3A2	52	89.583	Otolemur_garnettii
ENSORLG00015017116	sf3a2	74	94.444	ENSOARG00000014357	SF3A2	59	89.583	Ovis_aries
ENSORLG00015017116	sf3a2	74	79.630	ENSPPAG00000037864	-	50	76.250	Pan_paniscus
ENSORLG00015017116	sf3a2	74	93.981	ENSPPRG00000007798	SF3A2	51	89.167	Panthera_pardus
ENSORLG00015017116	sf3a2	74	94.444	ENSPTRG00000010227	SF3A2	52	89.583	Pan_troglodytes
ENSORLG00015017116	sf3a2	74	94.444	ENSPANG00000007949	SF3A2	52	89.583	Papio_anubis
ENSORLG00015017116	sf3a2	82	92.469	ENSPKIG00000009487	sf3a2	76	92.469	Paramormyrops_kingsleyae
ENSORLG00015017116	sf3a2	78	90.476	ENSPSIG00000010839	SF3A2	76	88.477	Pelodiscus_sinensis
ENSORLG00015017116	sf3a2	91	90.943	ENSPMGG00000017249	sf3a2	92	90.943	Periophthalmus_magnuspinnatus
ENSORLG00015017116	sf3a2	74	94.444	ENSPEMG00000021288	Sf3a2	52	89.583	Peromyscus_maniculatus_bairdii
ENSORLG00015017116	sf3a2	76	98.182	ENSPFOG00000015945	sf3a2	91	93.657	Poecilia_formosa
ENSORLG00015017116	sf3a2	76	98.182	ENSPLAG00000010052	sf3a2	91	94.030	Poecilia_latipinna
ENSORLG00015017116	sf3a2	76	98.182	ENSPMEG00000000184	sf3a2	91	93.657	Poecilia_mexicana
ENSORLG00015017116	sf3a2	76	98.182	ENSPREG00000017808	sf3a2	91	93.657	Poecilia_reticulata
ENSORLG00015017116	sf3a2	74	94.444	ENSPPYG00000009342	SF3A2	53	89.583	Pongo_abelii
ENSORLG00015017116	sf3a2	74	94.444	ENSPCOG00000020295	SF3A2	54	89.583	Propithecus_coquereli
ENSORLG00015017116	sf3a2	88	90.661	ENSPNYG00000006928	sf3a2	99	90.068	Pundamilia_nyererei
ENSORLG00015017116	sf3a2	82	92.050	ENSPNAG00000027582	sf3a2	79	92.050	Pygocentrus_nattereri
ENSORLG00015017116	sf3a2	74	93.981	ENSRNOG00000019349	Sf3a2	51	89.167	Rattus_norvegicus
ENSORLG00015017116	sf3a2	74	94.444	ENSRBIG00000026709	SF3A2	53	89.583	Rhinopithecus_bieti
ENSORLG00015017116	sf3a2	74	94.444	ENSRROG00000034440	SF3A2	51	89.583	Rhinopithecus_roxellana
ENSORLG00015017116	sf3a2	74	93.519	ENSSHAG00000011677	-	97	88.333	Sarcophilus_harrisii
ENSORLG00015017116	sf3a2	66	84.896	ENSSHAG00000011646	-	77	80.093	Sarcophilus_harrisii
ENSORLG00015017116	sf3a2	87	90.310	ENSSFOG00015010920	sf3a2	77	87.778	Scleropages_formosus
ENSORLG00015017116	sf3a2	84	91.463	ENSSMAG00000002629	sf3a2	92	88.722	Scophthalmus_maximus
ENSORLG00015017116	sf3a2	85	91.968	ENSSDUG00000015810	sf3a2	92	91.791	Seriola_dumerili
ENSORLG00015017116	sf3a2	85	91.968	ENSSLDG00000010874	sf3a2	92	91.791	Seriola_lalandi_dorsalis
ENSORLG00015017116	sf3a2	82	92.887	ENSSPAG00000004960	sf3a2	99	89.796	Stegastes_partitus
ENSORLG00015017116	sf3a2	74	93.981	ENSSSCG00000039757	SF3A2	52	89.167	Sus_scrofa
ENSORLG00015017116	sf3a2	70	94.634	ENSTGUG00000000305	SF3A2	100	94.634	Taeniopygia_guttata
ENSORLG00015017116	sf3a2	82	92.469	ENSTRUG00000009045	sf3a2	83	92.887	Takifugu_rubripes
ENSORLG00015017116	sf3a2	82	92.469	ENSTNIG00000015318	sf3a2	83	92.887	Tetraodon_nigroviridis
ENSORLG00015017116	sf3a2	74	78.704	ENSTTRG00000010177	-	52	75.417	Tursiops_truncatus
ENSORLG00015017116	sf3a2	74	94.444	ENSVVUG00000002578	SF3A2	50	89.583	Vulpes_vulpes
ENSORLG00015017116	sf3a2	82	88.797	ENSXETG00000024943	sf3a2	58	88.797	Xenopus_tropicalis
ENSORLG00015017116	sf3a2	82	96.667	ENSXCOG00000008222	sf3a2	91	94.757	Xiphophorus_couchianus
ENSORLG00015017116	sf3a2	82	96.667	ENSXMAG00000029068	sf3a2	91	94.757	Xiphophorus_maculatus