EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015017142 (Gene tree)
Gene ID: -
Gene Symbol: gfi1b
Alias: -
Full Name: growth factor independent 1B transcription repressor
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 3809 bases
Position: chr12:27951512-27955320
Accession: ZDB-GENE-091118-129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015016175	zf-C2H2	PF00096.26	1.5e-24	1	4
ENSORLP00015016175	zf-C2H2	PF00096.26	1.5e-24	2	4
ENSORLP00015016175	zf-C2H2	PF00096.26	1.5e-24	3	4
ENSORLP00015016175	zf-C2H2	PF00096.26	1.5e-24	4	4
ENSORLP00015016175	zf-met	PF12874.7	8.8e-08	1	2
ENSORLP00015016175	zf-met	PF12874.7	8.8e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015024302	-	2267	-	ENSORLP00015016175	326 (aa)	-	-

Gene Model

Click here to download ENSORLG00015017142's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015017142's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015017142	gfi1b	52	47.253	ENSORLG00015011236	-	58	47.253
ENSORLG00015017142	gfi1b	54	43.609	ENSORLG00015009684	znf319b	86	43.609
ENSORLG00015017142	gfi1b	55	42.446	ENSORLG00015012208	-	58	42.446
ENSORLG00015017142	gfi1b	65	45.070	ENSORLG00015012776	-	99	44.966
ENSORLG00015017142	gfi1b	73	45.625	ENSORLG00015012951	-	97	45.625
ENSORLG00015017142	gfi1b	52	45.872	ENSORLG00015014056	-	94	45.872
ENSORLG00015017142	gfi1b	52	43.478	ENSORLG00015016704	-	61	44.086
ENSORLG00015017142	gfi1b	58	44.872	ENSORLG00015000208	-	69	44.872
ENSORLG00015017142	gfi1b	52	34.586	ENSORLG00015011171	-	66	34.586
ENSORLG00015017142	gfi1b	51	37.179	ENSORLG00015015191	zgc:171929	58	37.179
ENSORLG00015017142	gfi1b	58	45.255	ENSORLG00015016420	-	80	46.552
ENSORLG00015017142	gfi1b	52	40.141	ENSORLG00015020022	-	81	40.141
ENSORLG00015017142	gfi1b	52	37.864	ENSORLG00015019424	-	55	32.653
ENSORLG00015017142	gfi1b	100	38.235	ENSORLG00015019165	scrt1b	53	38.235
ENSORLG00015017142	gfi1b	52	46.429	ENSORLG00015013962	-	69	46.429
ENSORLG00015017142	gfi1b	52	46.535	ENSORLG00015002548	-	67	42.537
ENSORLG00015017142	gfi1b	57	45.625	ENSORLG00015013093	-	53	45.625
ENSORLG00015017142	gfi1b	64	41.593	ENSORLG00015000258	-	98	43.860
ENSORLG00015017142	gfi1b	52	40.000	ENSORLG00015021191	-	72	40.000
ENSORLG00015017142	gfi1b	56	37.805	ENSORLG00015010720	-	66	37.805
ENSORLG00015017142	gfi1b	53	44.304	ENSORLG00015007168	-	79	44.304
ENSORLG00015017142	gfi1b	52	42.000	ENSORLG00015011524	-	64	42.000
ENSORLG00015017142	gfi1b	52	42.069	ENSORLG00015012800	-	66	42.069
ENSORLG00015017142	gfi1b	60	40.816	ENSORLG00015018099	-	71	40.816
ENSORLG00015017142	gfi1b	65	44.643	ENSORLG00015013160	-	98	44.643
ENSORLG00015017142	gfi1b	52	44.167	ENSORLG00015013417	-	97	44.167
ENSORLG00015017142	gfi1b	54	43.373	ENSORLG00015012158	-	68	43.373
ENSORLG00015017142	gfi1b	59	42.604	ENSORLG00015012052	-	92	42.604
ENSORLG00015017142	gfi1b	52	43.103	ENSORLG00015010834	-	79	43.103
ENSORLG00015017142	gfi1b	57	38.776	ENSORLG00015018360	znf341	50	38.776
ENSORLG00015017142	gfi1b	52	44.186	ENSORLG00015019853	-	59	44.186
ENSORLG00015017142	gfi1b	56	47.826	ENSORLG00015010783	-	73	47.826
ENSORLG00015017142	gfi1b	52	48.000	ENSORLG00015012339	-	92	44.828
ENSORLG00015017142	gfi1b	66	40.141	ENSORLG00015007164	-	98	40.141
ENSORLG00015017142	gfi1b	56	45.181	ENSORLG00015010892	-	79	45.181
ENSORLG00015017142	gfi1b	52	41.420	ENSORLG00015019986	-	70	41.420
ENSORLG00015017142	gfi1b	52	44.706	ENSORLG00015016558	-	82	43.284
ENSORLG00015017142	gfi1b	59	39.450	ENSORLG00015017255	-	51	39.450
ENSORLG00015017142	gfi1b	59	42.857	ENSORLG00015016085	-	98	42.857
ENSORLG00015017142	gfi1b	52	42.276	ENSORLG00015013302	-	70	42.276
ENSORLG00015017142	gfi1b	64	42.500	ENSORLG00015011401	-	95	43.373
ENSORLG00015017142	gfi1b	63	43.373	ENSORLG00015007742	-	88	44.785
ENSORLG00015017142	gfi1b	52	48.299	ENSORLG00015009384	-	93	48.515
ENSORLG00015017142	gfi1b	52	42.857	ENSORLG00015012084	-	69	42.857
ENSORLG00015017142	gfi1b	58	37.079	ENSORLG00015019117	-	57	37.079
ENSORLG00015017142	gfi1b	83	42.857	ENSORLG00015011153	-	93	41.071
ENSORLG00015017142	gfi1b	51	43.000	ENSORLG00015010853	-	84	43.000
ENSORLG00015017142	gfi1b	55	35.556	ENSORLG00015013828	-	57	35.556
ENSORLG00015017142	gfi1b	52	43.529	ENSORLG00015012121	-	63	43.529
ENSORLG00015017142	gfi1b	52	43.066	ENSORLG00015007146	-	58	43.066
ENSORLG00015017142	gfi1b	59	41.250	ENSORLG00015011509	-	91	41.250
ENSORLG00015017142	gfi1b	52	47.619	ENSORLG00015011917	-	80	47.619
ENSORLG00015017142	gfi1b	57	40.952	ENSORLG00015018781	zgc:66448	72	40.952
ENSORLG00015017142	gfi1b	51	42.771	ENSORLG00015014006	-	84	42.771
ENSORLG00015017142	gfi1b	58	44.944	ENSORLG00015013448	-	83	44.944
ENSORLG00015017142	gfi1b	52	45.238	ENSORLG00015012187	-	89	45.238
ENSORLG00015017142	gfi1b	61	44.218	ENSORLG00015007986	-	85	45.695
ENSORLG00015017142	gfi1b	53	40.994	ENSORLG00015013760	prdm5	73	40.994
ENSORLG00015017142	gfi1b	59	43.976	ENSORLG00015012904	-	78	43.976
ENSORLG00015017142	gfi1b	50	50.588	ENSORLG00015000916	-	91	50.588
ENSORLG00015017142	gfi1b	52	42.478	ENSORLG00015008733	znf646	61	42.478
ENSORLG00015017142	gfi1b	54	42.857	ENSORLG00015007200	ZNF319	93	42.857
ENSORLG00015017142	gfi1b	88	41.667	ENSORLG00015011758	-	92	41.667
ENSORLG00015017142	gfi1b	52	43.452	ENSORLG00015012062	-	71	43.452
ENSORLG00015017142	gfi1b	54	41.007	ENSORLG00015020558	-	69	41.007
ENSORLG00015017142	gfi1b	80	37.226	ENSORLG00015008609	snai2	98	37.226
ENSORLG00015017142	gfi1b	52	42.857	ENSORLG00015018258	-	81	41.228
ENSORLG00015017142	gfi1b	50	41.045	ENSORLG00015018254	-	88	41.045
ENSORLG00015017142	gfi1b	59	45.625	ENSORLG00015022006	-	75	45.625
ENSORLG00015017142	gfi1b	65	36.250	ENSORLG00015007853	zbtb41	68	36.250
ENSORLG00015017142	gfi1b	88	40.690	ENSORLG00015011496	-	95	40.690
ENSORLG00015017142	gfi1b	55	42.466	ENSORLG00015008496	-	98	42.466
ENSORLG00015017142	gfi1b	71	41.420	ENSORLG00015007132	-	92	41.420
ENSORLG00015017142	gfi1b	52	43.210	ENSORLG00015009640	-	91	42.657
ENSORLG00015017142	gfi1b	55	45.000	ENSORLG00015013102	-	90	43.976
ENSORLG00015017142	gfi1b	57	39.286	ENSORLG00015002568	zbtb48	69	37.500
ENSORLG00015017142	gfi1b	52	43.796	ENSORLG00015012826	-	58	43.796
ENSORLG00015017142	gfi1b	52	47.727	ENSORLG00015007920	-	99	45.238
ENSORLG00015017142	gfi1b	52	46.667	ENSORLG00015010816	-	87	46.667
ENSORLG00015017142	gfi1b	53	43.125	ENSORLG00015014015	-	90	44.937
ENSORLG00015017142	gfi1b	52	43.151	ENSORLG00015016741	-	93	43.151
ENSORLG00015017142	gfi1b	59	45.181	ENSORLG00015014823	-	99	45.985
ENSORLG00015017142	gfi1b	64	41.912	ENSORLG00015008013	-	81	41.912
ENSORLG00015017142	gfi1b	54	38.636	ENSORLG00015007973	-	65	38.636
ENSORLG00015017142	gfi1b	54	45.283	ENSORLG00015012627	-	74	45.283
ENSORLG00015017142	gfi1b	58	43.275	ENSORLG00015009782	-	91	44.521
ENSORLG00015017142	gfi1b	55	40.146	ENSORLG00015017539	-	86	41.071
ENSORLG00015017142	gfi1b	52	43.421	ENSORLG00015017097	-	67	43.421
ENSORLG00015017142	gfi1b	61	46.250	ENSORLG00015012892	-	87	46.250
ENSORLG00015017142	gfi1b	54	45.238	ENSORLG00015011730	-	97	42.262
ENSORLG00015017142	gfi1b	69	40.764	ENSORLG00015019124	-	89	41.860
ENSORLG00015017142	gfi1b	52	46.552	ENSORLG00015010765	-	58	46.552
ENSORLG00015017142	gfi1b	53	45.882	ENSORLG00015003796	-	81	45.882
ENSORLG00015017142	gfi1b	52	44.444	ENSORLG00015012840	-	53	44.444
ENSORLG00015017142	gfi1b	64	45.161	ENSORLG00015018340	znf236	56	45.161
ENSORLG00015017142	gfi1b	53	41.071	ENSORLG00015010933	-	67	41.071
ENSORLG00015017142	gfi1b	59	36.923	ENSORLG00015012599	-	60	36.923
ENSORLG00015017142	gfi1b	52	49.153	ENSORLG00015007128	-	98	35.625
ENSORLG00015017142	gfi1b	52	42.683	ENSORLG00015014916	-	88	42.683
ENSORLG00015017142	gfi1b	52	42.373	ENSORLG00015013935	-	85	42.373
ENSORLG00015017142	gfi1b	58	45.752	ENSORLG00015011871	-	98	44.172
ENSORLG00015017142	gfi1b	59	44.186	ENSORLG00015015776	-	98	46.875

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015017142	gfi1b	100	76.380	ENSAPOG00000001296	gfi1b	100	76.380	Acanthochromis_polyacanthus
ENSORLG00015017142	gfi1b	100	68.502	ENSACIG00000002190	gfi1b	100	68.502	Amphilophus_citrinellus
ENSORLG00015017142	gfi1b	100	76.380	ENSAOCG00000021187	gfi1b	100	76.380	Amphiprion_ocellaris
ENSORLG00015017142	gfi1b	100	76.687	ENSAPEG00000016196	gfi1b	100	76.687	Amphiprion_percula
ENSORLG00015017142	gfi1b	100	80.547	ENSATEG00000002534	gfi1b	100	80.547	Anabas_testudineus
ENSORLG00015017142	gfi1b	100	57.270	ENSAPLG00000003373	GFI1B	100	57.270	Anas_platyrhynchos
ENSORLG00015017142	gfi1b	100	70.427	ENSACLG00000027053	gfi1b	100	70.427	Astatotilapia_calliptera
ENSORLG00015017142	gfi1b	100	67.665	ENSAMXG00000037544	GFI1B	100	67.665	Astyanax_mexicanus
ENSORLG00015017142	gfi1b	100	57.726	ENSCAPG00000010404	GFI1B	100	57.726	Cavia_aperea
ENSORLG00015017142	gfi1b	100	55.908	ENSCPBG00000021186	GFI1B	100	55.908	Chrysemys_picta_bellii
ENSORLG00015017142	gfi1b	100	75.915	ENSCSEG00000001315	gfi1b	100	75.915	Cynoglossus_semilaevis
ENSORLG00015017142	gfi1b	100	74.847	ENSCVAG00000017168	gfi1b	100	74.847	Cyprinodon_variegatus
ENSORLG00015017142	gfi1b	100	65.714	ENSDARG00000079947	gfi1b	99	81.857	Danio_rerio
ENSORLG00015017142	gfi1b	63	51.961	ENSEEUG00000012609	-	90	51.961	Erinaceus_europaeus
ENSORLG00015017142	gfi1b	100	70.030	ENSELUG00000016933	gfi1b	100	70.030	Esox_lucius
ENSORLG00015017142	gfi1b	100	54.247	ENSFALG00000001479	GFI1B	100	54.247	Ficedula_albicollis
ENSORLG00015017142	gfi1b	100	79.697	ENSFHEG00000015138	gfi1b	100	79.697	Fundulus_heteroclitus
ENSORLG00015017142	gfi1b	80	75.564	ENSGMOG00000019123	gfi1b	100	75.564	Gadus_morhua
ENSORLG00015017142	gfi1b	100	57.522	ENSGALG00000003478	GFI1B	100	57.522	Gallus_gallus
ENSORLG00015017142	gfi1b	72	91.026	ENSGAFG00000003059	gfi1b	100	91.026	Gambusia_affinis
ENSORLG00015017142	gfi1b	100	71.347	ENSGACG00000018134	gfi1b	100	71.347	Gasterosteus_aculeatus
ENSORLG00015017142	gfi1b	100	57.738	ENSGAGG00000021327	GFI1B	100	57.738	Gopherus_agassizii
ENSORLG00015017142	gfi1b	100	70.427	ENSHBUG00000005451	gfi1b	100	70.427	Haplochromis_burtoni
ENSORLG00015017142	gfi1b	100	71.818	ENSHCOG00000013713	gfi1b	100	72.866	Hippocampus_comes
ENSORLG00015017142	gfi1b	100	68.222	ENSIPUG00000012769	gfi1b	100	68.222	Ictalurus_punctatus
ENSORLG00015017142	gfi1b	99	52.973	ENSJJAG00000016355	Gfi1b	100	52.973	Jaculus_jaculus
ENSORLG00015017142	gfi1b	100	76.596	ENSKMAG00000016047	gfi1b	100	76.596	Kryptolebias_marmoratus
ENSORLG00015017142	gfi1b	100	74.251	ENSLBEG00000020297	gfi1b	99	74.551	Labrus_bergylta
ENSORLG00015017142	gfi1b	100	59.012	ENSLACG00000012207	GFI1B	100	59.012	Latimeria_chalumnae
ENSORLG00015017142	gfi1b	100	67.953	ENSLOCG00000005750	gfi1b	100	67.953	Lepisosteus_oculatus
ENSORLG00015017142	gfi1b	100	57.958	ENSLAFG00000022367	GFI1B	100	57.958	Loxodonta_africana
ENSORLG00015017142	gfi1b	100	79.394	ENSMAMG00000003040	gfi1b	100	79.394	Mastacembelus_armatus
ENSORLG00015017142	gfi1b	99	70.336	ENSMZEG00005015594	gfi1b	99	70.336	Maylandia_zebra
ENSORLG00015017142	gfi1b	100	57.227	ENSMGAG00000006129	GFI1B	100	57.227	Meleagris_gallopavo
ENSORLG00015017142	gfi1b	100	76.292	ENSMMOG00000011764	gfi1b	100	76.292	Mola_mola
ENSORLG00015017142	gfi1b	100	51.762	ENSMODG00000012600	GFI1B	100	51.762	Monodelphis_domestica
ENSORLG00015017142	gfi1b	100	76.524	ENSMALG00000004034	gfi1b	100	76.524	Monopterus_albus
ENSORLG00015017142	gfi1b	99	58.485	ENSNGAG00000003333	Gfi1b	100	58.485	Nannospalax_galili
ENSORLG00015017142	gfi1b	52	65.926	ENSNBRG00000012376	-	100	65.926	Neolamprologus_brichardi
ENSORLG00015017142	gfi1b	100	69.605	ENSNBRG00000012391	gfi1b	100	69.605	Neolamprologus_brichardi
ENSORLG00015017142	gfi1b	100	70.000	ENSONIG00000013011	gfi1b	94	93.296	Oreochromis_niloticus
ENSORLG00015017142	gfi1b	100	59.459	ENSOANG00000014723	GFI1B	100	59.459	Ornithorhynchus_anatinus
ENSORLG00015017142	gfi1b	84	96.350	ENSORLG00000014390	GFI1B	96	96.350	Oryzias_latipes
ENSORLG00015017142	gfi1b	100	98.773	ENSORLG00020003719	GFI1B	100	98.773	Oryzias_latipes_hni
ENSORLG00015017142	gfi1b	100	90.491	ENSOMEG00000015149	GFI1B	100	90.491	Oryzias_melastigma
ENSORLG00015017142	gfi1b	100	57.267	ENSOGAG00000008879	GFI1B	100	57.267	Otolemur_garnettii
ENSORLG00015017142	gfi1b	100	67.456	ENSPKIG00000007643	gfi1b	100	67.456	Paramormyrops_kingsleyae
ENSORLG00015017142	gfi1b	100	58.046	ENSPSIG00000012112	GFI1B	100	58.046	Pelodiscus_sinensis
ENSORLG00015017142	gfi1b	99	67.976	ENSPMGG00000006021	gfi1b	99	68.882	Periophthalmus_magnuspinnatus
ENSORLG00015017142	gfi1b	100	51.630	ENSPCIG00000019724	GFI1B	100	51.630	Phascolarctos_cinereus
ENSORLG00015017142	gfi1b	100	76.627	ENSPFOG00000003460	gfi1b	100	76.627	Poecilia_formosa
ENSORLG00015017142	gfi1b	100	77.711	ENSPLAG00000021960	GFI1B	100	77.711	Poecilia_latipinna
ENSORLG00015017142	gfi1b	100	75.731	ENSPLAG00000017181	GFI1B	100	75.731	Poecilia_latipinna
ENSORLG00015017142	gfi1b	100	77.711	ENSPMEG00000019220	gfi1b	100	77.711	Poecilia_mexicana
ENSORLG00015017142	gfi1b	100	77.711	ENSPMEG00000001556	GFI1B	100	77.711	Poecilia_mexicana
ENSORLG00015017142	gfi1b	100	78.012	ENSPREG00000021718	gfi1b	100	78.012	Poecilia_reticulata
ENSORLG00015017142	gfi1b	100	69.512	ENSPNYG00000018422	gfi1b	100	69.512	Pundamilia_nyererei
ENSORLG00015017142	gfi1b	100	67.868	ENSPNAG00000021118	gfi1b	100	67.868	Pygocentrus_nattereri
ENSORLG00015017142	gfi1b	100	47.200	ENSSHAG00000006462	GFI1B	100	47.200	Sarcophilus_harrisii
ENSORLG00015017142	gfi1b	83	62.500	ENSSFOG00015011566	gfi1b	90	62.500	Scleropages_formosus
ENSORLG00015017142	gfi1b	100	76.596	ENSSMAG00000015181	gfi1b	98	76.596	Scophthalmus_maximus
ENSORLG00015017142	gfi1b	100	79.573	ENSSDUG00000011604	gfi1b	100	79.573	Seriola_dumerili
ENSORLG00015017142	gfi1b	100	78.963	ENSSLDG00000013823	gfi1b	100	78.963	Seriola_lalandi_dorsalis
ENSORLG00015017142	gfi1b	100	47.076	ENSSPUG00000016039	GFI1B	100	47.076	Sphenodon_punctatus
ENSORLG00015017142	gfi1b	100	76.380	ENSSPAG00000022914	gfi1b	100	76.380	Stegastes_partitus
ENSORLG00015017142	gfi1b	51	91.228	ENSTGUG00000005282	-	99	91.228	Taeniopygia_guttata
ENSORLG00015017142	gfi1b	100	74.695	ENSTRUG00000004525	gfi1b	100	74.695	Takifugu_rubripes
ENSORLG00015017142	gfi1b	100	74.468	ENSTNIG00000003834	gfi1b	100	74.468	Tetraodon_nigroviridis
ENSORLG00015017142	gfi1b	100	40.841	ENSTBEG00000014459	GFI1B	100	40.841	Tupaia_belangeri
ENSORLG00015017142	gfi1b	100	56.213	ENSXETG00000006263	gfi1b	100	57.522	Xenopus_tropicalis
ENSORLG00015017142	gfi1b	100	78.012	ENSXMAG00000027589	gfi1b	100	78.012	Xiphophorus_maculatus