EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015017184 (Gene tree)
Gene ID: -
Gene Symbol: tdrd1
Alias: -
Full Name: Oryzias latipes tudor domain containing 1 (tdrd1)%2C mRNA.
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 16972 bases
Position: chr19:5645407-5662378
Accession: NM_001122929
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015016142	TUDOR	PF00567.24	2.5e-108	1	4
ENSORLP00015016142	TUDOR	PF00567.24	2.5e-108	2	4
ENSORLP00015016142	TUDOR	PF00567.24	2.5e-108	3	4
ENSORLP00015016142	TUDOR	PF00567.24	2.5e-108	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015024253	-	3776	-	ENSORLP00015016142	1130 (aa)	-	-

Gene Model

Click here to download ENSORLG00015017184's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015017184's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015017184	tdrd1	76	32.117	ENSORLG00015001382	amh	72	32.117

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015017184	tdrd1	85	34.858	ENSG00000095627	TDRD1	82	35.845	Homo_sapiens
ENSORLG00015017184	tdrd1	99	54.704	ENSAPOG00000023199	tdrd1	99	55.052	Acanthochromis_polyacanthus
ENSORLG00015017184	tdrd1	85	35.815	ENSAMEG00000015182	TDRD1	83	35.815	Ailuropoda_melanoleuca
ENSORLG00015017184	tdrd1	99	55.139	ENSACIG00000010576	tdrd1	97	55.139	Amphilophus_citrinellus
ENSORLG00015017184	tdrd1	99	58.692	ENSAOCG00000007059	tdrd1	99	51.767	Amphiprion_ocellaris
ENSORLG00015017184	tdrd1	99	56.049	ENSAPEG00000017049	tdrd1	98	56.223	Amphiprion_percula
ENSORLG00015017184	tdrd1	95	57.025	ENSATEG00000021627	tdrd1	94	57.025	Anabas_testudineus
ENSORLG00015017184	tdrd1	85	35.146	ENSAPLG00000012609	TDRD1	92	35.146	Anas_platyrhynchos
ENSORLG00015017184	tdrd1	82	34.464	ENSACAG00000009854	TDRD1	78	34.464	Anolis_carolinensis
ENSORLG00015017184	tdrd1	84	36.870	ENSANAG00000035710	TDRD1	81	36.870	Aotus_nancymaae
ENSORLG00015017184	tdrd1	99	53.652	ENSACLG00000014107	tdrd1	99	53.652	Astatotilapia_calliptera
ENSORLG00015017184	tdrd1	99	43.076	ENSAMXG00000015146	tdrd1	99	43.076	Astyanax_mexicanus
ENSORLG00015017184	tdrd1	91	35.474	ENSBTAG00000006855	TDRD1	87	34.267	Bos_taurus
ENSORLG00015017184	tdrd1	85	35.592	ENSCJAG00000019270	TDRD1	83	35.592	Callithrix_jacchus
ENSORLG00015017184	tdrd1	84	35.240	ENSCAFG00000011266	TDRD1	84	35.240	Canis_familiaris
ENSORLG00015017184	tdrd1	84	36.004	ENSCAFG00020012373	TDRD1	84	35.240	Canis_lupus_dingo
ENSORLG00015017184	tdrd1	89	35.164	ENSCHIG00000012766	TDRD1	85	35.164	Capra_hircus
ENSORLG00015017184	tdrd1	82	36.374	ENSTSYG00000004935	TDRD1	80	36.374	Carlito_syrichta
ENSORLG00015017184	tdrd1	85	34.521	ENSCPOG00000004190	TDRD1	83	34.521	Cavia_porcellus
ENSORLG00015017184	tdrd1	85	36.041	ENSCCAG00000027375	TDRD1	82	37.097	Cebus_capucinus
ENSORLG00015017184	tdrd1	90	35.067	ENSCATG00000035999	TDRD1	85	35.067	Cercocebus_atys
ENSORLG00015017184	tdrd1	85	34.848	ENSCLAG00000003935	TDRD1	82	34.848	Chinchilla_lanigera
ENSORLG00015017184	tdrd1	90	34.971	ENSCSAG00000005071	TDRD1	85	34.971	Chlorocebus_sabaeus
ENSORLG00015017184	tdrd1	88	47.445	ENSCHOG00000001690	TDRD1	67	47.445	Choloepus_hoffmanni
ENSORLG00015017184	tdrd1	87	38.470	ENSCPBG00000003780	TDRD1	82	38.470	Chrysemys_picta_bellii
ENSORLG00015017184	tdrd1	85	35.628	ENSCANG00000035172	TDRD1	81	36.656	Colobus_angolensis_palliatus
ENSORLG00015017184	tdrd1	84	35.274	ENSCGRG00001004632	Tdrd1	85	35.274	Cricetulus_griseus_chok1gshd
ENSORLG00015017184	tdrd1	85	34.245	ENSCGRG00000004981	Tdrd1	81	34.245	Cricetulus_griseus_crigri
ENSORLG00015017184	tdrd1	91	47.710	ENSCSEG00000006983	tdrd1	98	47.130	Cynoglossus_semilaevis
ENSORLG00015017184	tdrd1	88	52.900	ENSCVAG00000020980	tdrd1	97	52.900	Cyprinodon_variegatus
ENSORLG00015017184	tdrd1	99	42.591	ENSDARG00000007465	tdrd1	99	42.591	Danio_rerio
ENSORLG00015017184	tdrd1	86	36.999	ENSDNOG00000012114	TDRD1	80	37.102	Dasypus_novemcinctus
ENSORLG00015017184	tdrd1	85	35.931	ENSDORG00000009986	Tdrd1	82	35.931	Dipodomys_ordii
ENSORLG00015017184	tdrd1	85	33.060	ENSETEG00000020143	TDRD1	83	33.060	Echinops_telfairi
ENSORLG00015017184	tdrd1	52	33.333	ENSEBUG00000003519	-	96	33.333	Eptatretus_burgeri
ENSORLG00015017184	tdrd1	89	34.429	ENSEASG00005014802	TDRD1	85	35.342	Equus_asinus_asinus
ENSORLG00015017184	tdrd1	92	36.788	ENSECAG00000009748	TDRD1	82	36.000	Equus_caballus
ENSORLG00015017184	tdrd1	89	33.979	ENSEEUG00000010076	TDRD1	86	33.979	Erinaceus_europaeus
ENSORLG00015017184	tdrd1	99	45.310	ENSELUG00000024364	tdrd1	99	45.310	Esox_lucius
ENSORLG00015017184	tdrd1	85	35.176	ENSFCAG00000000632	TDRD1	83	35.276	Felis_catus
ENSORLG00015017184	tdrd1	77	34.763	ENSFALG00000002237	TDRD1	84	34.763	Ficedula_albicollis
ENSORLG00015017184	tdrd1	85	34.980	ENSFDAG00000013225	TDRD1	84	34.980	Fukomys_damarensis
ENSORLG00015017184	tdrd1	98	42.258	ENSFHEG00000009203	tdrd1	99	42.471	Fundulus_heteroclitus
ENSORLG00015017184	tdrd1	73	48.148	ENSGMOG00000016797	-	69	48.148	Gadus_morhua
ENSORLG00015017184	tdrd1	85	33.603	ENSGALG00000046180	TDRD1	87	33.603	Gallus_gallus
ENSORLG00015017184	tdrd1	99	51.730	ENSGAFG00000002668	tdrd1	98	51.817	Gambusia_affinis
ENSORLG00015017184	tdrd1	82	56.543	ENSGACG00000006590	tdrd1	100	56.543	Gasterosteus_aculeatus
ENSORLG00015017184	tdrd1	85	35.061	ENSGGOG00000004250	TDRD1	81	36.060	Gorilla_gorilla
ENSORLG00015017184	tdrd1	99	53.788	ENSHBUG00000005216	tdrd1	98	53.788	Haplochromis_burtoni
ENSORLG00015017184	tdrd1	84	33.907	ENSHGLG00000010877	TDRD1	84	33.907	Heterocephalus_glaber_female
ENSORLG00015017184	tdrd1	83	36.459	ENSHGLG00100013857	TDRD1	86	36.459	Heterocephalus_glaber_male
ENSORLG00015017184	tdrd1	99	40.513	ENSHCOG00000002840	tdrd1	99	40.803	Hippocampus_comes
ENSORLG00015017184	tdrd1	99	44.606	ENSIPUG00000017232	tdrd1	99	44.606	Ictalurus_punctatus
ENSORLG00015017184	tdrd1	88	35.172	ENSSTOG00000003221	TDRD1	85	35.959	Ictidomys_tridecemlineatus
ENSORLG00015017184	tdrd1	88	35.392	ENSJJAG00000014720	Tdrd1	85	35.392	Jaculus_jaculus
ENSORLG00015017184	tdrd1	90	58.325	ENSKMAG00000018558	tdrd1	97	58.325	Kryptolebias_marmoratus
ENSORLG00015017184	tdrd1	98	56.160	ENSLBEG00000004161	tdrd1	97	56.229	Labrus_bergylta
ENSORLG00015017184	tdrd1	84	35.246	ENSLACG00000011559	TDRD1	85	35.097	Latimeria_chalumnae
ENSORLG00015017184	tdrd1	99	37.871	ENSLOCG00000012030	tdrd1	100	41.611	Lepisosteus_oculatus
ENSORLG00015017184	tdrd1	77	36.456	ENSLAFG00000011575	TDRD1	93	36.456	Loxodonta_africana
ENSORLG00015017184	tdrd1	90	35.164	ENSMFAG00000043487	TDRD1	85	35.164	Macaca_fascicularis
ENSORLG00015017184	tdrd1	85	35.736	ENSMMUG00000022517	TDRD1	81	36.774	Macaca_mulatta
ENSORLG00015017184	tdrd1	90	35.164	ENSMNEG00000031108	TDRD1	85	35.164	Macaca_nemestrina
ENSORLG00015017184	tdrd1	90	35.067	ENSMLEG00000032281	TDRD1	85	35.067	Mandrillus_leucophaeus
ENSORLG00015017184	tdrd1	92	56.888	ENSMAMG00000015287	tdrd1	99	54.387	Mastacembelus_armatus
ENSORLG00015017184	tdrd1	99	53.665	ENSMZEG00005025315	tdrd1	99	53.665	Maylandia_zebra
ENSORLG00015017184	tdrd1	85	34.256	ENSMGAG00000011067	TDRD1	100	34.256	Meleagris_gallopavo
ENSORLG00015017184	tdrd1	76	36.930	ENSMAUG00000012164	Tdrd1	78	36.930	Mesocricetus_auratus
ENSORLG00015017184	tdrd1	85	35.294	ENSMICG00000016190	TDRD1	81	36.305	Microcebus_murinus
ENSORLG00015017184	tdrd1	91	34.738	ENSMOCG00000022360	Tdrd1	88	34.831	Microtus_ochrogaster
ENSORLG00015017184	tdrd1	99	53.906	ENSMMOG00000014068	tdrd1	99	53.906	Mola_mola
ENSORLG00015017184	tdrd1	88	36.027	ENSMODG00000009788	TDRD1	85	36.027	Monodelphis_domestica
ENSORLG00015017184	tdrd1	99	52.385	ENSMALG00000022115	tdrd1	98	53.588	Monopterus_albus
ENSORLG00015017184	tdrd1	89	33.975	MGP_CAROLIEiJ_G0023095	Tdrd1	87	34.071	Mus_caroli
ENSORLG00015017184	tdrd1	89	34.264	ENSMUSG00000025081	Tdrd1	87	34.360	Mus_musculus
ENSORLG00015017184	tdrd1	85	35.664	MGP_PahariEiJ_G0014583	Tdrd1	84	34.829	Mus_pahari
ENSORLG00015017184	tdrd1	89	33.975	MGP_SPRETEiJ_G0024016	Tdrd1	87	34.071	Mus_spretus
ENSORLG00015017184	tdrd1	85	34.731	ENSMPUG00000001987	TDRD1	83	34.731	Mustela_putorius_furo
ENSORLG00015017184	tdrd1	85	34.146	ENSNGAG00000015231	Tdrd1	84	34.146	Nannospalax_galili
ENSORLG00015017184	tdrd1	99	53.773	ENSNBRG00000017920	tdrd1	98	53.773	Neolamprologus_brichardi
ENSORLG00015017184	tdrd1	86	35.027	ENSNLEG00000016228	TDRD1	80	35.027	Nomascus_leucogenys
ENSORLG00015017184	tdrd1	86	33.900	ENSMEUG00000007717	TDRD1	83	33.900	Notamacropus_eugenii
ENSORLG00015017184	tdrd1	90	34.990	ENSOPRG00000009180	TDRD1	86	34.990	Ochotona_princeps
ENSORLG00015017184	tdrd1	84	36.103	ENSODEG00000011965	TDRD1	83	36.103	Octodon_degus
ENSORLG00015017184	tdrd1	99	55.148	ENSONIG00000016382	tdrd1	99	55.148	Oreochromis_niloticus
ENSORLG00015017184	tdrd1	86	34.714	ENSOANG00000001562	TDRD1	86	34.714	Ornithorhynchus_anatinus
ENSORLG00015017184	tdrd1	85	36.032	ENSOCUG00000025327	TDRD1	83	36.032	Oryctolagus_cuniculus
ENSORLG00015017184	tdrd1	99	97.314	ENSORLG00000004833	tdrd1	99	97.401	Oryzias_latipes
ENSORLG00015017184	tdrd1	100	97.264	ENSORLG00020019231	tdrd1	100	97.264	Oryzias_latipes_hni
ENSORLG00015017184	tdrd1	98	72.121	ENSOMEG00000023637	tdrd1	99	70.559	Oryzias_melastigma
ENSORLG00015017184	tdrd1	94	33.669	ENSOGAG00000001370	TDRD1	85	33.669	Otolemur_garnettii
ENSORLG00015017184	tdrd1	92	34.669	ENSOARG00000014200	-	86	34.669	Ovis_aries
ENSORLG00015017184	tdrd1	85	34.858	ENSPPAG00000041621	TDRD1	81	35.845	Pan_paniscus
ENSORLG00015017184	tdrd1	85	35.271	ENSPPRG00000000191	TDRD1	83	35.406	Panthera_pardus
ENSORLG00015017184	tdrd1	85	35.474	ENSPTIG00000010264	TDRD1	83	35.576	Panthera_tigris_altaica
ENSORLG00015017184	tdrd1	85	34.858	ENSPTRG00000002958	TDRD1	81	35.845	Pan_troglodytes
ENSORLG00015017184	tdrd1	90	34.971	ENSPANG00000020752	TDRD1	85	34.971	Papio_anubis
ENSORLG00015017184	tdrd1	95	40.037	ENSPKIG00000010586	tdrd1	93	40.037	Paramormyrops_kingsleyae
ENSORLG00015017184	tdrd1	85	35.276	ENSPSIG00000014655	TDRD1	80	35.276	Pelodiscus_sinensis
ENSORLG00015017184	tdrd1	86	45.891	ENSPMGG00000018890	tdrd1	99	47.015	Periophthalmus_magnuspinnatus
ENSORLG00015017184	tdrd1	85	35.903	ENSPEMG00000004582	Tdrd1	82	35.903	Peromyscus_maniculatus_bairdii
ENSORLG00015017184	tdrd1	74	34.043	ENSPMAG00000004416	-	100	34.043	Petromyzon_marinus
ENSORLG00015017184	tdrd1	91	35.962	ENSPCIG00000009739	TDRD1	84	35.556	Phascolarctos_cinereus
ENSORLG00015017184	tdrd1	92	52.881	ENSPFOG00000002145	tdrd1	99	52.881	Poecilia_formosa
ENSORLG00015017184	tdrd1	99	52.361	ENSPLAG00000010241	tdrd1	98	52.361	Poecilia_latipinna
ENSORLG00015017184	tdrd1	99	51.842	ENSPMEG00000021893	tdrd1	98	51.842	Poecilia_mexicana
ENSORLG00015017184	tdrd1	99	52.749	ENSPREG00000022663	tdrd1	98	52.749	Poecilia_reticulata
ENSORLG00015017184	tdrd1	85	33.740	ENSPPYG00000002671	TDRD1	80	33.740	Pongo_abelii
ENSORLG00015017184	tdrd1	84	34.802	ENSPCAG00000006692	TDRD1	72	34.802	Procavia_capensis
ENSORLG00015017184	tdrd1	85	35.193	ENSPCOG00000026619	TDRD1	81	36.111	Propithecus_coquereli
ENSORLG00015017184	tdrd1	87	35.849	ENSPVAG00000003055	TDRD1	82	35.849	Pteropus_vampyrus
ENSORLG00015017184	tdrd1	99	53.068	ENSPNYG00000001706	tdrd1	98	53.068	Pundamilia_nyererei
ENSORLG00015017184	tdrd1	99	44.080	ENSPNAG00000005831	tdrd1	99	44.080	Pygocentrus_nattereri
ENSORLG00015017184	tdrd1	89	34.745	ENSRNOG00000017064	Tdrd1	89	34.745	Rattus_norvegicus
ENSORLG00015017184	tdrd1	90	34.682	ENSRBIG00000029668	TDRD1	87	34.682	Rhinopithecus_bieti
ENSORLG00015017184	tdrd1	90	34.682	ENSRROG00000043379	TDRD1	85	35.605	Rhinopithecus_roxellana
ENSORLG00015017184	tdrd1	85	35.700	ENSSBOG00000023561	TDRD1	81	36.735	Saimiri_boliviensis_boliviensis
ENSORLG00015017184	tdrd1	95	33.727	ENSSHAG00000014311	TDRD1	87	33.727	Sarcophilus_harrisii
ENSORLG00015017184	tdrd1	85	42.036	ENSSFOG00015022020	tdrd1	92	42.036	Scleropages_formosus
ENSORLG00015017184	tdrd1	95	54.995	ENSSMAG00000019271	tdrd1	98	53.667	Scophthalmus_maximus
ENSORLG00015017184	tdrd1	92	59.006	ENSSDUG00000022012	tdrd1	97	58.073	Seriola_dumerili
ENSORLG00015017184	tdrd1	92	58.741	ENSSLDG00000006423	tdrd1	99	57.014	Seriola_lalandi_dorsalis
ENSORLG00015017184	tdrd1	84	36.260	ENSSARG00000008828	TDRD1	64	36.260	Sorex_araneus
ENSORLG00015017184	tdrd1	84	33.402	ENSSPUG00000005015	TDRD1	82	33.402	Sphenodon_punctatus
ENSORLG00015017184	tdrd1	99	54.007	ENSSPAG00000018805	tdrd1	99	54.007	Stegastes_partitus
ENSORLG00015017184	tdrd1	89	34.459	ENSSSCG00000021075	TDRD1	85	34.459	Sus_scrofa
ENSORLG00015017184	tdrd1	80	34.993	ENSTGUG00000010905	TDRD1	94	34.993	Taeniopygia_guttata
ENSORLG00015017184	tdrd1	92	50.960	ENSTRUG00000012142	tdrd1	100	50.444	Takifugu_rubripes
ENSORLG00015017184	tdrd1	79	50.787	ENSTNIG00000018898	tdrd1	100	51.969	Tetraodon_nigroviridis
ENSORLG00015017184	tdrd1	85	36.381	ENSTBEG00000014417	-	78	36.381	Tupaia_belangeri
ENSORLG00015017184	tdrd1	85	34.451	ENSTTRG00000010147	TDRD1	82	34.451	Tursiops_truncatus
ENSORLG00015017184	tdrd1	85	35.984	ENSUAMG00000009025	TDRD1	83	35.984	Ursus_americanus
ENSORLG00015017184	tdrd1	85	36.217	ENSUMAG00000000705	TDRD1	83	36.217	Ursus_maritimus
ENSORLG00015017184	tdrd1	83	36.166	ENSVPAG00000004000	TDRD1	80	36.166	Vicugna_pacos
ENSORLG00015017184	tdrd1	84	35.816	ENSVVUG00000009750	TDRD1	84	35.816	Vulpes_vulpes
ENSORLG00015017184	tdrd1	75	56.877	ENSXCOG00000006412	tdrd1	97	56.877	Xiphophorus_couchianus
ENSORLG00015017184	tdrd1	92	55.756	ENSXMAG00000008104	tdrd1	94	55.756	Xiphophorus_maculatus