EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015017539 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 7924 bases
Position: chr9:4831768-4839691
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015032623	zf-C2H2	PF00096.26	3.7e-32	1	6
ENSORLP00015032623	zf-C2H2	PF00096.26	3.7e-32	2	6
ENSORLP00015032623	zf-C2H2	PF00096.26	3.7e-32	3	6
ENSORLP00015032623	zf-C2H2	PF00096.26	3.7e-32	4	6
ENSORLP00015032623	zf-C2H2	PF00096.26	3.7e-32	5	6
ENSORLP00015032623	zf-C2H2	PF00096.26	3.7e-32	6	6
ENSORLP00015016571	zf-C2H2	PF00096.26	4.7e-22	1	4
ENSORLP00015016571	zf-C2H2	PF00096.26	4.7e-22	2	4
ENSORLP00015016571	zf-C2H2	PF00096.26	4.7e-22	3	4
ENSORLP00015016571	zf-C2H2	PF00096.26	4.7e-22	4	4
ENSORLP00015016571	zf-met	PF12874.7	4.6e-11	1	2
ENSORLP00015016571	zf-met	PF12874.7	4.6e-11	2	2
ENSORLP00015032623	zf-met	PF12874.7	2e-07	1	2
ENSORLP00015032623	zf-met	PF12874.7	2e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015024784	-	507	-	ENSORLP00015016571	168 (aa)	-	-
ENSORLT00015024797	-	6137	-	ENSORLP00015032623	824 (aa)	-	-

Gene Model

Click here to download ENSORLG00015017539's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015017539's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015017539	-	97	49.074	ENSORLG00015009782	-	92	51.579
ENSORLG00015017539	-	81	54.118	ENSORLG00015012062	-	78	54.118
ENSORLG00015017539	-	80	46.667	ENSORLG00015007200	ZNF319	90	46.667
ENSORLG00015017539	-	88	48.246	ENSORLG00015003796	-	92	40.090
ENSORLG00015017539	-	83	47.368	ENSORLG00015000258	-	98	50.588
ENSORLG00015017539	-	99	51.685	ENSORLG00015010892	-	88	51.685
ENSORLG00015017539	-	76	43.210	ENSORLG00015018099	-	67	43.363
ENSORLG00015017539	-	92	46.914	ENSORLG00015013448	-	78	46.914
ENSORLG00015017539	-	97	41.463	ENSORLG00015013828	-	64	41.463
ENSORLG00015017539	-	73	55.882	ENSORLG00015012840	-	50	55.882
ENSORLG00015017539	-	86	41.071	ENSORLG00015017142	gfi1b	55	40.146
ENSORLG00015017539	-	95	34.783	ENSORLG00015011171	-	74	34.783
ENSORLG00015017539	-	84	46.667	ENSORLG00015009684	znf319b	85	46.667
ENSORLG00015017539	-	96	51.685	ENSORLG00015013417	-	97	51.685
ENSORLG00015017539	-	85	47.368	ENSORLG00015018781	zgc:66448	75	47.368
ENSORLG00015017539	-	98	40.449	ENSORLG00015007128	-	100	39.216
ENSORLG00015017539	-	89	44.144	ENSORLG00015012599	-	60	44.144
ENSORLG00015017539	-	98	53.704	ENSORLG00015014823	-	95	49.573
ENSORLG00015017539	-	85	43.363	ENSORLG00015021191	-	70	38.739
ENSORLG00015017539	-	68	49.533	ENSORLG00015010834	-	70	49.533
ENSORLG00015017539	-	92	54.206	ENSORLG00015014916	-	87	54.206
ENSORLG00015017539	-	68	56.190	ENSORLG00015012208	-	64	50.000
ENSORLG00015017539	-	97	54.023	ENSORLG00015013962	-	67	54.023
ENSORLG00015017539	-	68	41.964	ENSORLG00015002548	-	71	43.689
ENSORLG00015017539	-	97	42.735	ENSORLG00015020022	-	83	40.909
ENSORLG00015017539	-	97	37.864	ENSORLG00015021496	PRDM15	54	38.462
ENSORLG00015017539	-	98	55.056	ENSORLG00015011730	-	94	50.000
ENSORLG00015017539	-	85	47.321	ENSORLG00015010765	-	67	47.321
ENSORLG00015017539	-	89	44.304	ENSORLG00015008733	znf646	73	41.441
ENSORLG00015017539	-	96	51.402	ENSORLG00015013102	-	90	47.899
ENSORLG00015017539	-	95	50.435	ENSORLG00015007920	-	99	52.273
ENSORLG00015017539	-	80	46.250	ENSORLG00015018340	znf236	63	43.925
ENSORLG00015017539	-	89	49.515	ENSORLG00015020558	-	71	49.515
ENSORLG00015017539	-	96	49.565	ENSORLG00015012158	-	80	49.565
ENSORLG00015017539	-	69	49.533	ENSORLG00015011496	-	68	44.079
ENSORLG00015017539	-	76	53.043	ENSORLG00015022006	-	75	53.043
ENSORLG00015017539	-	97	53.271	ENSORLG00015011917	-	76	53.271
ENSORLG00015017539	-	87	47.170	ENSORLG00015019853	-	67	47.170
ENSORLG00015017539	-	74	53.333	ENSORLG00015007132	-	56	53.333
ENSORLG00015017539	-	77	52.809	ENSORLG00015011758	-	67	52.809
ENSORLG00015017539	-	81	48.598	ENSORLG00015014006	-	89	48.598
ENSORLG00015017539	-	77	40.260	ENSORLG00015019424	-	71	34.375
ENSORLG00015017539	-	95	50.467	ENSORLG00015007742	-	91	49.057
ENSORLG00015017539	-	76	50.000	ENSORLG00015017097	-	63	50.000
ENSORLG00015017539	-	90	55.556	ENSORLG00015010933	-	78	55.556
ENSORLG00015017539	-	77	50.000	ENSORLG00015008013	-	76	50.000
ENSORLG00015017539	-	68	48.598	ENSORLG00015010783	-	71	48.598
ENSORLG00015017539	-	79	53.086	ENSORLG00015012826	-	56	53.086
ENSORLG00015017539	-	93	46.729	ENSORLG00015016741	-	95	46.729
ENSORLG00015017539	-	69	50.467	ENSORLG00015013093	-	52	50.467
ENSORLG00015017539	-	92	50.000	ENSORLG00015008496	-	98	48.276
ENSORLG00015017539	-	80	44.000	ENSORLG00015005524	scrt2	51	44.000
ENSORLG00015017539	-	98	52.427	ENSORLG00015016558	-	87	52.427
ENSORLG00015017539	-	64	43.810	ENSORLG00015008609	snai2	52	43.810
ENSORLG00015017539	-	93	44.340	ENSORLG00015007973	-	65	38.009
ENSORLG00015017539	-	92	53.659	ENSORLG00015012892	-	94	53.659
ENSORLG00015017539	-	93	53.271	ENSORLG00015011524	-	63	53.271
ENSORLG00015017539	-	89	42.308	ENSORLG00015017255	-	57	41.441
ENSORLG00015017539	-	64	41.772	ENSORLG00015016392	-	83	41.772
ENSORLG00015017539	-	77	45.794	ENSORLG00015010720	-	62	45.794
ENSORLG00015017539	-	97	45.217	ENSORLG00015009384	-	95	46.491
ENSORLG00015017539	-	91	49.541	ENSORLG00015014015	-	97	49.541
ENSORLG00015017539	-	92	52.991	ENSORLG00015010816	-	86	52.991
ENSORLG00015017539	-	89	40.741	ENSORLG00015002568	zbtb48	58	40.741
ENSORLG00015017539	-	99	47.664	ENSORLG00015016085	-	94	47.664
ENSORLG00015017539	-	69	48.544	ENSORLG00015018254	-	88	48.544
ENSORLG00015017539	-	93	50.000	ENSORLG00015018258	-	89	50.000
ENSORLG00015017539	-	86	48.315	ENSORLG00015011236	-	55	48.598
ENSORLG00015017539	-	97	50.862	ENSORLG00015013160	-	98	48.352
ENSORLG00015017539	-	64	45.882	ENSORLG00015013935	-	82	48.246
ENSORLG00015017539	-	68	51.376	ENSORLG00015016704	-	66	49.432
ENSORLG00015017539	-	96	57.143	ENSORLG00015011871	-	98	58.696
ENSORLG00015017539	-	95	51.402	ENSORLG00015015776	-	98	46.729
ENSORLG00015017539	-	96	51.786	ENSORLG00015012339	-	92	53.333
ENSORLG00015017539	-	97	46.552	ENSORLG00015011153	-	98	50.000
ENSORLG00015017539	-	96	47.273	ENSORLG00015012951	-	95	46.729
ENSORLG00015017539	-	96	53.271	ENSORLG00015012187	-	94	53.271
ENSORLG00015017539	-	83	46.729	ENSORLG00015013760	prdm5	72	46.729
ENSORLG00015017539	-	98	52.688	ENSORLG00015012776	-	97	52.688
ENSORLG00015017539	-	95	52.336	ENSORLG00015007986	-	92	50.435
ENSORLG00015017539	-	95	45.833	ENSORLG00015010853	-	94	47.475
ENSORLG00015017539	-	93	50.435	ENSORLG00015011509	-	91	50.435
ENSORLG00015017539	-	76	51.765	ENSORLG00015012800	-	66	46.970
ENSORLG00015017539	-	89	52.336	ENSORLG00015012052	-	93	52.336
ENSORLG00015017539	-	90	53.165	ENSORLG00015014056	-	91	53.165
ENSORLG00015017539	-	92	51.376	ENSORLG00015009640	-	88	54.206
ENSORLG00015017539	-	97	50.000	ENSORLG00015019124	-	82	50.000
ENSORLG00015017539	-	68	47.826	ENSORLG00015012121	-	66	47.826
ENSORLG00015017539	-	74	40.000	ENSORLG00015007853	zbtb41	60	38.095
ENSORLG00015017539	-	73	50.000	ENSORLG00015017068	-	50	43.636
ENSORLG00015017539	-	67	42.353	ENSORLG00015019165	scrt1b	51	36.283
ENSORLG00015017539	-	92	48.315	ENSORLG00015007164	-	85	48.315
ENSORLG00015017539	-	91	46.552	ENSORLG00015007168	-	93	47.977
ENSORLG00015017539	-	73	51.402	ENSORLG00015016420	-	81	51.402
ENSORLG00015017539	-	92	52.336	ENSORLG00015012084	-	68	52.336
ENSORLG00015017539	-	71	49.057	ENSORLG00015019986	-	68	44.330
ENSORLG00015017539	-	68	52.830	ENSORLG00015007146	-	57	52.830
ENSORLG00015017539	-	91	53.012	ENSORLG00015012904	-	78	53.012
ENSORLG00015017539	-	94	48.000	ENSORLG00015018360	znf341	51	42.857
ENSORLG00015017539	-	86	48.235	ENSORLG00015012627	-	74	49.123
ENSORLG00015017539	-	73	43.103	ENSORLG00015000208	-	64	43.103
ENSORLG00015017539	-	96	55.556	ENSORLG00015011401	-	91	52.252
ENSORLG00015017539	-	84	50.000	ENSORLG00015013302	-	70	48.387
ENSORLG00015017539	-	64	43.396	ENSORLG00015000916	-	91	43.925

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015017539	-	83	56.842	ENSG00000159915	ZNF233	69	54.144	Homo_sapiens
ENSORLG00015017539	-	83	56.250	ENSAMEG00000006122	ZNF233	74	54.000	Ailuropoda_melanoleuca
ENSORLG00015017539	-	69	54.286	ENSCATG00000015076	ZNF233	68	51.852	Cercocebus_atys
ENSORLG00015017539	-	68	55.556	ENSCSAG00000003326	ZNF233	71	54.967	Chlorocebus_sabaeus
ENSORLG00015017539	-	68	57.292	ENSCHOG00000010443	ZNF233	68	57.843	Choloepus_hoffmanni
ENSORLG00015017539	-	68	56.250	ENSCANG00000032081	ZNF233	69	52.381	Colobus_angolensis_palliatus
ENSORLG00015017539	-	68	51.754	ENSCGRG00000015629	-	57	51.754	Cricetulus_griseus_crigri
ENSORLG00015017539	-	71	54.630	ENSDNOG00000038729	ZNF233	67	52.683	Dasypus_novemcinctus
ENSORLG00015017539	-	68	46.429	ENSFALG00000009044	-	100	46.429	Ficedula_albicollis
ENSORLG00015017539	-	83	55.556	ENSGGOG00000013940	ZNF233	75	54.822	Gorilla_gorilla
ENSORLG00015017539	-	68	57.292	ENSMFAG00000039215	ZNF233	71	52.358	Macaca_fascicularis
ENSORLG00015017539	-	68	57.292	ENSMMUG00000012797	ZNF233	61	57.292	Macaca_mulatta
ENSORLG00015017539	-	93	57.895	ENSMZEG00005024630	-	81	50.761	Maylandia_zebra
ENSORLG00015017539	-	83	55.556	ENSMICG00000016725	ZNF233	63	54.680	Microcebus_murinus
ENSORLG00015017539	-	69	53.704	MGP_CAROLIEiJ_G0029326	Zfp108	66	54.018	Mus_caroli
ENSORLG00015017539	-	85	55.238	MGP_CAROLIEiJ_G0029327	Zfp93	69	55.238	Mus_caroli
ENSORLG00015017539	-	89	54.286	MGP_CAROLIEiJ_G0029322	Zfp235	68	54.422	Mus_caroli
ENSORLG00015017539	-	68	55.238	ENSMUSG00000055305	Zfp93	66	52.466	Mus_musculus
ENSORLG00015017539	-	69	57.143	ENSMUSG00000068962	Zfp114	66	52.915	Mus_musculus
ENSORLG00015017539	-	73	51.754	ENSMUSG00000030486	Zfp108	66	53.704	Mus_musculus
ENSORLG00015017539	-	89	54.286	ENSMUSG00000047603	Zfp235	68	54.286	Mus_musculus
ENSORLG00015017539	-	97	56.190	MGP_PahariEiJ_G0021178	Zfp93	99	54.630	Mus_pahari
ENSORLG00015017539	-	73	51.765	MGP_PahariEiJ_G0021177	Zfp108	66	53.125	Mus_pahari
ENSORLG00015017539	-	89	54.286	MGP_PahariEiJ_G0021173	Zfp235	68	53.741	Mus_pahari
ENSORLG00015017539	-	89	54.286	MGP_SPRETEiJ_G0030416	Zfp235	61	54.422	Mus_spretus
ENSORLG00015017539	-	69	56.190	MGP_SPRETEiJ_G0030417	Zfp114	78	52.018	Mus_spretus
ENSORLG00015017539	-	69	51.754	MGP_SPRETEiJ_G0030420	Zfp108	65	54.018	Mus_spretus
ENSORLG00015017539	-	68	53.153	MGP_SPRETEiJ_G0030421	-	87	53.153	Mus_spretus
ENSORLG00015017539	-	100	95.131	ENSORLG00000027054	-	100	94.893	Oryzias_latipes
ENSORLG00015017539	-	100	94.893	ENSORLG00020000181	-	100	94.656	Oryzias_latipes_hni
ENSORLG00015017539	-	95	94.444	ENSOMEG00000013771	-	99	69.894	Oryzias_melastigma
ENSORLG00015017539	-	68	54.386	ENSOGAG00000001912	ZNF233	63	53.623	Otolemur_garnettii
ENSORLG00015017539	-	83	58.333	ENSPPAG00000030145	ZNF233	65	56.494	Pan_paniscus
ENSORLG00015017539	-	83	58.333	ENSPTRG00000011111	ZNF233	65	56.494	Pan_troglodytes
ENSORLG00015017539	-	68	57.292	ENSPANG00000010670	ZNF233	59	64.444	Papio_anubis
ENSORLG00015017539	-	97	53.509	ENSPEMG00000018022	-	68	53.812	Peromyscus_maniculatus_bairdii
ENSORLG00015017539	-	68	55.556	ENSPPYG00000010085	ZNF233	68	47.909	Pongo_abelii
ENSORLG00015017539	-	96	56.522	ENSPCOG00000015292	ZNF233	60	64.444	Propithecus_coquereli
ENSORLG00015017539	-	77	56.471	ENSPVAG00000004388	ZNF233	57	46.369	Pteropus_vampyrus
ENSORLG00015017539	-	68	55.556	ENSRBIG00000035218	ZNF233	69	54.040	Rhinopithecus_bieti
ENSORLG00015017539	-	68	58.333	ENSRROG00000030619	ZNF233	60	64.444	Rhinopithecus_roxellana
ENSORLG00015017539	-	68	56.522	ENSTTRG00000011818	ZNF233	60	66.667	Tursiops_truncatus
ENSORLG00015017539	-	96	54.386	ENSUMAG00000023065	ZNF233	77	54.386	Ursus_maritimus
ENSORLG00015017539	-	73	58.621	ENSVPAG00000007465	ZNF233	59	53.500	Vicugna_pacos
ENSORLG00015017539	-	91	48.148	ENSXMAG00000027300	-	73	48.148	Xiphophorus_maculatus