EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015017635 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 23309 bases
Position: chr3:31012578-31035886
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015016662	FDF	PF09532.10	8.3e-08	1	1
ENSORLP00015016662	LSM14	PF12701.7	1.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015024900	-	3485	-	ENSORLP00015016662	494 (aa)	-	-

Gene Model

Click here to download ENSORLG00015017635's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015017635's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015017635	-	96	62.940	ENSORLG00015005634	edc3	100	62.940

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015017635	-	96	55.664	ENSG00000179151	EDC3	100	72.222	Homo_sapiens
ENSORLG00015017635	-	96	68.902	ENSAPOG00000008655	EDC3	100	68.902	Acanthochromis_polyacanthus
ENSORLG00015017635	-	96	65.010	ENSAPOG00000010791	edc3	100	65.010	Acanthochromis_polyacanthus
ENSORLG00015017635	-	96	56.641	ENSAMEG00000008963	EDC3	100	56.641	Ailuropoda_melanoleuca
ENSORLG00015017635	-	95	74.545	ENSACIG00000005330	EDC3	99	74.545	Amphilophus_citrinellus
ENSORLG00015017635	-	96	63.278	ENSACIG00000017751	edc3	100	63.278	Amphilophus_citrinellus
ENSORLG00015017635	-	96	65.010	ENSAOCG00000005431	edc3	100	65.010	Amphiprion_ocellaris
ENSORLG00015017635	-	96	76.371	ENSAOCG00000009103	-	100	76.371	Amphiprion_ocellaris
ENSORLG00015017635	-	96	76.582	ENSAPEG00000007841	EDC3	100	76.582	Amphiprion_percula
ENSORLG00015017635	-	96	65.010	ENSAPEG00000000968	edc3	100	65.010	Amphiprion_percula
ENSORLG00015017635	-	96	65.010	ENSATEG00000015505	edc3	100	65.010	Anabas_testudineus
ENSORLG00015017635	-	96	76.050	ENSATEG00000004205	-	100	76.050	Anabas_testudineus
ENSORLG00015017635	-	72	65.537	ENSAPLG00000008957	EDC3	77	65.537	Anas_platyrhynchos
ENSORLG00015017635	-	73	53.383	ENSACAG00000000460	-	100	53.383	Anolis_carolinensis
ENSORLG00015017635	-	96	55.837	ENSANAG00000024078	EDC3	100	55.837	Aotus_nancymaae
ENSORLG00015017635	-	96	63.278	ENSACLG00000007232	edc3	100	63.278	Astatotilapia_calliptera
ENSORLG00015017635	-	95	75.212	ENSACLG00000018776	-	99	75.212	Astatotilapia_calliptera
ENSORLG00015017635	-	96	62.598	ENSAMXG00000001589	edc3	100	62.598	Astyanax_mexicanus
ENSORLG00015017635	-	96	56.445	ENSBTAG00000007308	EDC3	100	56.445	Bos_taurus
ENSORLG00015017635	-	96	56.226	ENSCJAG00000017681	EDC3	100	56.226	Callithrix_jacchus
ENSORLG00015017635	-	96	56.641	ENSCAFG00000017935	EDC3	100	56.641	Canis_familiaris
ENSORLG00015017635	-	96	56.641	ENSCAFG00020003909	EDC3	100	56.641	Canis_lupus_dingo
ENSORLG00015017635	-	96	56.641	ENSCHIG00000023658	EDC3	100	56.641	Capra_hircus
ENSORLG00015017635	-	96	56.226	ENSTSYG00000004822	EDC3	100	55.859	Carlito_syrichta
ENSORLG00015017635	-	96	56.445	ENSCPOG00000015595	EDC3	100	56.445	Cavia_porcellus
ENSORLG00015017635	-	96	56.031	ENSCCAG00000021663	EDC3	100	56.031	Cebus_capucinus
ENSORLG00015017635	-	96	56.250	ENSCATG00000037511	EDC3	100	56.250	Cercocebus_atys
ENSORLG00015017635	-	96	56.836	ENSCLAG00000005700	EDC3	100	56.836	Chinchilla_lanigera
ENSORLG00015017635	-	96	56.250	ENSCSAG00000014239	EDC3	100	56.250	Chlorocebus_sabaeus
ENSORLG00015017635	-	95	56.836	ENSCPBG00000024239	EDC3	99	56.667	Chrysemys_picta_bellii
ENSORLG00015017635	-	95	36.255	ENSCING00000022142	-	99	36.255	Ciona_intestinalis
ENSORLG00015017635	-	96	56.250	ENSCANG00000028699	EDC3	100	56.250	Colobus_angolensis_palliatus
ENSORLG00015017635	-	96	56.226	ENSCGRG00001013874	Edc3	100	56.226	Cricetulus_griseus_chok1gshd
ENSORLG00015017635	-	96	56.226	ENSCGRG00000011885	Edc3	100	56.226	Cricetulus_griseus_crigri
ENSORLG00015017635	-	95	64.523	ENSCSEG00000012996	edc3	99	64.523	Cynoglossus_semilaevis
ENSORLG00015017635	-	96	64.033	ENSCVAG00000008023	edc3	100	64.033	Cyprinodon_variegatus
ENSORLG00015017635	-	95	60.511	ENSDARG00000051931	edc3	99	60.904	Danio_rerio
ENSORLG00015017635	-	96	50.383	ENSDNOG00000030661	EDC3	100	50.383	Dasypus_novemcinctus
ENSORLG00015017635	-	67	72.222	ENSETEG00000002398	-	64	72.222	Echinops_telfairi
ENSORLG00015017635	-	96	56.641	ENSEASG00005005071	EDC3	100	56.641	Equus_asinus_asinus
ENSORLG00015017635	-	96	56.641	ENSECAG00000017994	EDC3	100	56.641	Equus_caballus
ENSORLG00015017635	-	96	65.546	ENSELUG00000007607	EDC3	100	65.546	Esox_lucius
ENSORLG00015017635	-	96	62.500	ENSELUG00000005794	edc3	100	62.500	Esox_lucius
ENSORLG00015017635	-	96	56.250	ENSFCAG00000002014	EDC3	100	56.250	Felis_catus
ENSORLG00015017635	-	94	54.382	ENSFALG00000004543	EDC3	96	54.382	Ficedula_albicollis
ENSORLG00015017635	-	96	56.250	ENSFDAG00000012582	EDC3	100	56.250	Fukomys_damarensis
ENSORLG00015017635	-	96	63.900	ENSFHEG00000009375	edc3	100	63.900	Fundulus_heteroclitus
ENSORLG00015017635	-	96	64.389	ENSGMOG00000002715	edc3	100	64.389	Gadus_morhua
ENSORLG00015017635	-	95	56.496	ENSGALG00000040181	EDC3	99	56.496	Gallus_gallus
ENSORLG00015017635	-	96	63.147	ENSGAFG00000014433	edc3	100	63.147	Gambusia_affinis
ENSORLG00015017635	-	96	63.636	ENSGACG00000009783	edc3	100	63.636	Gasterosteus_aculeatus
ENSORLG00015017635	-	95	68.047	ENSGACG00000014671	EDC3	99	68.442	Gasterosteus_aculeatus
ENSORLG00015017635	-	95	57.087	ENSGAGG00000023477	EDC3	99	57.087	Gopherus_agassizii
ENSORLG00015017635	-	96	56.250	ENSGGOG00000003552	EDC3	100	55.664	Gorilla_gorilla
ENSORLG00015017635	-	95	75.424	ENSHBUG00000020817	EDC3	99	75.424	Haplochromis_burtoni
ENSORLG00015017635	-	96	63.278	ENSHBUG00000003635	edc3	100	63.278	Haplochromis_burtoni
ENSORLG00015017635	-	96	62.422	ENSHCOG00000016834	edc3	100	62.422	Hippocampus_comes
ENSORLG00015017635	-	95	62.028	ENSIPUG00000005695	edc3	99	62.028	Ictalurus_punctatus
ENSORLG00015017635	-	96	55.859	ENSSTOG00000013936	EDC3	100	55.859	Ictidomys_tridecemlineatus
ENSORLG00015017635	-	96	56.226	ENSJJAG00000008074	Edc3	100	56.226	Jaculus_jaculus
ENSORLG00015017635	-	96	63.975	ENSKMAG00000001243	edc3	100	63.975	Kryptolebias_marmoratus
ENSORLG00015017635	-	96	79.325	ENSKMAG00000001987	EDC3	100	79.325	Kryptolebias_marmoratus
ENSORLG00015017635	-	96	63.485	ENSLBEG00000013435	edc3	99	63.485	Labrus_bergylta
ENSORLG00015017635	-	96	75.732	ENSLBEG00000017984	EDC3	100	75.732	Labrus_bergylta
ENSORLG00015017635	-	95	58.252	ENSLACG00000014149	EDC3	99	58.252	Latimeria_chalumnae
ENSORLG00015017635	-	95	57.778	ENSLOCG00000014625	edc3	99	58.384	Lepisosteus_oculatus
ENSORLG00015017635	-	96	56.920	ENSLAFG00000002992	EDC3	100	56.920	Loxodonta_africana
ENSORLG00015017635	-	96	56.250	ENSMFAG00000043074	EDC3	100	56.250	Macaca_fascicularis
ENSORLG00015017635	-	96	56.250	ENSMMUG00000011071	EDC3	100	56.250	Macaca_mulatta
ENSORLG00015017635	-	96	56.250	ENSMNEG00000035316	EDC3	100	56.250	Macaca_nemestrina
ENSORLG00015017635	-	96	56.250	ENSMLEG00000030372	EDC3	100	56.250	Mandrillus_leucophaeus
ENSORLG00015017635	-	96	64.198	ENSMAMG00000000505	edc3	100	64.198	Mastacembelus_armatus
ENSORLG00015017635	-	95	77.215	ENSMAMG00000005423	-	99	77.215	Mastacembelus_armatus
ENSORLG00015017635	-	96	63.071	ENSMZEG00005004892	edc3	100	63.071	Maylandia_zebra
ENSORLG00015017635	-	95	74.895	ENSMZEG00005005654	EDC3	99	74.895	Maylandia_zebra
ENSORLG00015017635	-	95	56.496	ENSMGAG00000002617	EDC3	99	56.496	Meleagris_gallopavo
ENSORLG00015017635	-	96	56.226	ENSMICG00000043190	EDC3	100	56.226	Microcebus_murinus
ENSORLG00015017635	-	96	56.250	ENSMOCG00000016205	Edc3	100	56.250	Microtus_ochrogaster
ENSORLG00015017635	-	95	64.583	ENSMMOG00000012278	edc3	99	64.583	Mola_mola
ENSORLG00015017635	-	95	56.360	ENSMODG00000009442	EDC3	99	56.360	Monodelphis_domestica
ENSORLG00015017635	-	96	64.596	ENSMALG00000008658	edc3	100	64.596	Monopterus_albus
ENSORLG00015017635	-	96	56.055	MGP_CAROLIEiJ_G0032280	Edc3	100	72.308	Mus_caroli
ENSORLG00015017635	-	96	56.055	ENSMUSG00000038957	Edc3	100	72.308	Mus_musculus
ENSORLG00015017635	-	96	56.055	MGP_PahariEiJ_G0015146	Edc3	100	72.308	Mus_pahari
ENSORLG00015017635	-	96	56.055	MGP_SPRETEiJ_G0033420	Edc3	100	72.308	Mus_spretus
ENSORLG00015017635	-	96	56.250	ENSMPUG00000017293	EDC3	100	56.250	Mustela_putorius_furo
ENSORLG00015017635	-	96	56.202	ENSMLUG00000016382	EDC3	100	56.202	Myotis_lucifugus
ENSORLG00015017635	-	96	56.445	ENSNGAG00000010923	Edc3	100	56.445	Nannospalax_galili
ENSORLG00015017635	-	96	63.071	ENSNBRG00000002434	edc3	100	63.071	Neolamprologus_brichardi
ENSORLG00015017635	-	95	74.167	ENSNBRG00000007881	EDC3	99	74.167	Neolamprologus_brichardi
ENSORLG00015017635	-	96	48.438	ENSNLEG00000014577	EDC3	100	48.249	Nomascus_leucogenys
ENSORLG00015017635	-	95	56.299	ENSMEUG00000009077	EDC3	99	56.299	Notamacropus_eugenii
ENSORLG00015017635	-	82	72.222	ENSOPRG00000009540	-	79	72.222	Ochotona_princeps
ENSORLG00015017635	-	96	63.485	ENSONIG00000008434	edc3	100	63.485	Oreochromis_niloticus
ENSORLG00015017635	-	95	70.175	ENSONIG00000002932	-	99	70.175	Oreochromis_niloticus
ENSORLG00015017635	-	73	53.500	ENSOCUG00000017740	EDC3	86	53.500	Oryctolagus_cuniculus
ENSORLG00015017635	-	96	62.733	ENSORLG00000004883	edc3	100	62.733	Oryzias_latipes
ENSORLG00015017635	-	97	98.960	ENSORLG00000014399	-	100	98.960	Oryzias_latipes
ENSORLG00015017635	-	96	98.941	ENSORLG00020019446	-	100	98.941	Oryzias_latipes_hni
ENSORLG00015017635	-	96	62.940	ENSORLG00020012262	edc3	100	62.940	Oryzias_latipes_hni
ENSORLG00015017635	-	96	93.856	ENSOMEG00000017354	EDC3	100	93.856	Oryzias_melastigma
ENSORLG00015017635	-	96	63.693	ENSOMEG00000014026	edc3	100	63.693	Oryzias_melastigma
ENSORLG00015017635	-	96	55.664	ENSOGAG00000014441	EDC3	100	55.664	Otolemur_garnettii
ENSORLG00015017635	-	96	55.166	ENSOARG00000003476	EDC3	100	56.725	Ovis_aries
ENSORLG00015017635	-	96	56.250	ENSPPAG00000040143	EDC3	100	55.664	Pan_paniscus
ENSORLG00015017635	-	96	56.250	ENSPPRG00000006257	EDC3	100	56.250	Panthera_pardus
ENSORLG00015017635	-	96	56.250	ENSPTIG00000017424	EDC3	100	56.250	Panthera_tigris_altaica
ENSORLG00015017635	-	96	56.250	ENSPTRG00000007279	EDC3	100	55.664	Pan_troglodytes
ENSORLG00015017635	-	96	56.250	ENSPANG00000015997	EDC3	100	56.250	Papio_anubis
ENSORLG00015017635	-	96	62.626	ENSPKIG00000019810	EDC3	100	62.828	Paramormyrops_kingsleyae
ENSORLG00015017635	-	95	61.462	ENSPKIG00000004416	edc3	99	61.462	Paramormyrops_kingsleyae
ENSORLG00015017635	-	95	51.961	ENSPSIG00000008474	EDC3	99	52.941	Pelodiscus_sinensis
ENSORLG00015017635	-	96	63.071	ENSPMGG00000007223	edc3	100	63.071	Periophthalmus_magnuspinnatus
ENSORLG00015017635	-	96	56.420	ENSPEMG00000015260	Edc3	100	56.420	Peromyscus_maniculatus_bairdii
ENSORLG00015017635	-	95	55.906	ENSPCIG00000006276	EDC3	70	55.906	Phascolarctos_cinereus
ENSORLG00015017635	-	96	63.278	ENSPFOG00000012204	edc3	100	63.278	Poecilia_formosa
ENSORLG00015017635	-	96	63.278	ENSPLAG00000014420	edc3	100	63.278	Poecilia_latipinna
ENSORLG00015017635	-	96	63.278	ENSPMEG00000023289	edc3	100	63.278	Poecilia_mexicana
ENSORLG00015017635	-	96	63.278	ENSPREG00000016022	edc3	100	63.278	Poecilia_reticulata
ENSORLG00015017635	-	96	55.273	ENSPPYG00000006642	EDC3	100	55.273	Pongo_abelii
ENSORLG00015017635	-	83	72.222	ENSPCAG00000002802	EDC3	80	72.222	Procavia_capensis
ENSORLG00015017635	-	96	55.859	ENSPCOG00000013364	EDC3	100	55.859	Propithecus_coquereli
ENSORLG00015017635	-	96	56.226	ENSPVAG00000014733	EDC3	100	56.226	Pteropus_vampyrus
ENSORLG00015017635	-	95	75.424	ENSPNYG00000009669	EDC3	99	75.424	Pundamilia_nyererei
ENSORLG00015017635	-	96	63.278	ENSPNYG00000021797	edc3	100	63.278	Pundamilia_nyererei
ENSORLG00015017635	-	96	62.279	ENSPNAG00000019657	edc3	100	62.279	Pygocentrus_nattereri
ENSORLG00015017635	-	95	55.490	ENSRNOG00000019579	Edc3	100	55.490	Rattus_norvegicus
ENSORLG00015017635	-	96	56.445	ENSRBIG00000019488	EDC3	100	56.445	Rhinopithecus_bieti
ENSORLG00015017635	-	96	56.445	ENSRROG00000034959	EDC3	100	56.445	Rhinopithecus_roxellana
ENSORLG00015017635	-	96	56.031	ENSSBOG00000004896	EDC3	100	56.031	Saimiri_boliviensis_boliviensis
ENSORLG00015017635	-	92	55.397	ENSSHAG00000015075	EDC3	95	55.193	Sarcophilus_harrisii
ENSORLG00015017635	-	96	64.979	ENSSFOG00015002439	edc3	100	65.401	Scleropages_formosus
ENSORLG00015017635	-	96	64.414	ENSSFOG00015016939	edc3	100	64.414	Scleropages_formosus
ENSORLG00015017635	-	96	63.485	ENSSMAG00000010695	edc3	100	63.786	Scophthalmus_maximus
ENSORLG00015017635	-	95	76.793	ENSSMAG00000010176	-	99	76.793	Scophthalmus_maximus
ENSORLG00015017635	-	96	64.108	ENSSDUG00000021844	edc3	100	64.108	Seriola_dumerili
ENSORLG00015017635	-	96	78.361	ENSSDUG00000007671	EDC3	100	78.361	Seriola_dumerili
ENSORLG00015017635	-	96	64.108	ENSSLDG00000022046	edc3	100	64.108	Seriola_lalandi_dorsalis
ENSORLG00015017635	-	64	71.774	ENSSARG00000003907	EDC3	62	71.774	Sorex_araneus
ENSORLG00015017635	-	95	56.275	ENSSPUG00000008232	EDC3	99	56.275	Sphenodon_punctatus
ENSORLG00015017635	-	96	78.903	ENSSPAG00000020327	EDC3	100	78.903	Stegastes_partitus
ENSORLG00015017635	-	96	64.050	ENSSPAG00000010009	edc3	100	64.050	Stegastes_partitus
ENSORLG00015017635	-	96	59.408	ENSSSCG00000001903	EDC3	100	59.408	Sus_scrofa
ENSORLG00015017635	-	95	56.496	ENSTGUG00000004007	EDC3	99	56.496	Taeniopygia_guttata
ENSORLG00015017635	-	96	64.241	ENSTRUG00000017078	edc3	100	64.241	Takifugu_rubripes
ENSORLG00015017635	-	96	63.223	ENSTNIG00000016047	edc3	100	63.223	Tetraodon_nigroviridis
ENSORLG00015017635	-	96	57.059	ENSTTRG00000007990	EDC3	100	57.059	Tursiops_truncatus
ENSORLG00015017635	-	96	56.641	ENSUAMG00000026710	-	100	56.641	Ursus_americanus
ENSORLG00015017635	-	98	55.939	ENSUMAG00000005006	EDC3	98	55.939	Ursus_maritimus
ENSORLG00015017635	-	82	66.667	ENSVPAG00000003499	-	79	66.667	Vicugna_pacos
ENSORLG00015017635	-	96	56.641	ENSVVUG00000018601	EDC3	100	56.641	Vulpes_vulpes
ENSORLG00015017635	-	70	63.533	ENSXETG00000010622	edc3	99	64.387	Xenopus_tropicalis
ENSORLG00015017635	-	96	62.857	ENSXMAG00000007377	edc3	100	62.857	Xiphophorus_maculatus