EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015017638 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 5183 bases
Position: chr11:16685317-16690499
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015016652	RVT_1	PF00078.27	1.7e-11	1	1
ENSORLP00015016659	RVT_1	PF00078.27	1.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015024895	-	3546	-	ENSORLP00015016652	789 (aa)	-	-
ENSORLT00015024910	-	3867	-	ENSORLP00015016659	789 (aa)	-	-

Gene Model

Click here to download ENSORLG00015017638's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015017638's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015017638	-	98	35.669	ENSORLG00015008822	-	88	35.632
ENSORLG00015017638	-	83	30.391	ENSORLG00015003846	-	70	30.391
ENSORLG00015017638	-	78	36.058	ENSORLG00015010510	-	99	36.058
ENSORLG00015017638	-	55	35.845	ENSORLG00015010653	-	61	35.845
ENSORLG00015017638	-	97	33.376	ENSORLG00015013406	-	57	33.376
ENSORLG00015017638	-	89	99.006	ENSORLG00015004212	-	100	99.006
ENSORLG00015017638	-	89	36.530	ENSORLG00015011725	-	52	36.530
ENSORLG00015017638	-	97	35.488	ENSORLG00015009567	-	52	37.042

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015017638	-	78	36.246	ENSAPOG00000012090	-	76	36.246	Acanthochromis_polyacanthus
ENSORLG00015017638	-	59	32.128	ENSAPOG00000006495	-	93	32.128	Acanthochromis_polyacanthus
ENSORLG00015017638	-	99	34.913	ENSACLG00000027702	-	84	36.000	Astatotilapia_calliptera
ENSORLG00015017638	-	98	37.628	ENSACLG00000022170	-	74	39.241	Astatotilapia_calliptera
ENSORLG00015017638	-	67	38.636	ENSACLG00000018563	-	95	38.636	Astatotilapia_calliptera
ENSORLG00015017638	-	97	37.629	ENSACLG00000016676	-	58	37.629	Astatotilapia_calliptera
ENSORLG00015017638	-	97	35.687	ENSACLG00000017062	-	68	36.338	Astatotilapia_calliptera
ENSORLG00015017638	-	98	35.904	ENSACLG00000017755	-	58	35.451	Astatotilapia_calliptera
ENSORLG00015017638	-	97	37.629	ENSACLG00000008642	-	71	37.629	Astatotilapia_calliptera
ENSORLG00015017638	-	69	38.517	ENSACLG00000005337	-	53	38.517	Astatotilapia_calliptera
ENSORLG00015017638	-	98	37.420	ENSACLG00000015817	-	57	37.931	Astatotilapia_calliptera
ENSORLG00015017638	-	98	37.372	ENSACLG00000018225	-	59	39.241	Astatotilapia_calliptera
ENSORLG00015017638	-	89	35.593	ENSAMXG00000041082	-	54	35.593	Astyanax_mexicanus
ENSORLG00015017638	-	89	37.395	ENSAMXG00000040613	-	51	37.395	Astyanax_mexicanus
ENSORLG00015017638	-	69	38.716	ENSCVAG00000020225	-	53	38.716	Cyprinodon_variegatus
ENSORLG00015017638	-	51	38.653	ENSHBUG00000016250	-	72	38.653	Haplochromis_burtoni
ENSORLG00015017638	-	60	35.625	ENSHCOG00000007453	-	51	35.625	Hippocampus_comes
ENSORLG00015017638	-	89	35.475	ENSORLG00000023329	-	51	35.475	Oryzias_latipes
ENSORLG00015017638	-	97	35.696	ENSORLG00000025291	-	74	37.183	Oryzias_latipes
ENSORLG00015017638	-	98	98.323	ENSORLG00000029490	-	56	98.323	Oryzias_latipes
ENSORLG00015017638	-	98	98.710	ENSORLG00000027118	-	56	98.710	Oryzias_latipes
ENSORLG00015017638	-	91	99.024	ENSORLG00000028630	-	58	99.024	Oryzias_latipes
ENSORLG00015017638	-	98	38.217	ENSORLG00000022041	-	58	38.314	Oryzias_latipes
ENSORLG00015017638	-	89	35.894	ENSORLG00000027297	-	51	35.894	Oryzias_latipes
ENSORLG00015017638	-	73	36.615	ENSORLG00000025169	-	61	36.615	Oryzias_latipes
ENSORLG00015017638	-	92	38.889	ENSORLG00000023484	-	55	38.889	Oryzias_latipes
ENSORLG00015017638	-	50	37.406	ENSORLG00000028640	-	75	37.406	Oryzias_latipes
ENSORLG00015017638	-	54	40.281	ENSORLG00020020421	-	56	40.281	Oryzias_latipes_hni
ENSORLG00015017638	-	97	97.919	ENSORLG00020014275	-	75	97.919	Oryzias_latipes_hni
ENSORLG00015017638	-	87	37.660	ENSORLG00020000502	-	57	35.959	Oryzias_latipes_hni
ENSORLG00015017638	-	100	98.099	ENSORLG00020016480	-	100	98.099	Oryzias_latipes_hni
ENSORLG00015017638	-	89	35.754	ENSORLG00020010381	-	58	35.754	Oryzias_latipes_hni
ENSORLG00015017638	-	98	98.581	ENSORLG00020004233	-	61	98.581	Oryzias_latipes_hni
ENSORLG00015017638	-	99	35.294	ENSORLG00020008265	-	59	34.962	Oryzias_latipes_hni
ENSORLG00015017638	-	89	35.854	ENSORLG00020005861	-	59	34.962	Oryzias_latipes_hni
ENSORLG00015017638	-	57	40.667	ENSORLG00020001172	-	74	40.667	Oryzias_latipes_hni
ENSORLG00015017638	-	89	36.056	ENSOMEG00000015349	-	52	36.056	Oryzias_melastigma