EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015017643 (Gene tree)
Gene ID: -
Gene Symbol: gar1
Alias: -
Full Name: GAR1 homolog%2C ribonucleoprotein
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 7991 bases
Position: chr10:5893976-5901966
Accession: ZDB-GENE-040426-893
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015032670	Gar1	PF04410.14	4.9e-39	1	1
ENSORLP00015016657	Gar1	PF04410.14	5.4e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015024908	-	1797	-	ENSORLP00015016657	285 (aa)	-	-
ENSORLT00015024888	-	1717	-	ENSORLP00015032670	219 (aa)	-	-

Gene Model

Click here to download ENSORLG00015017643's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015017643's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015017643	gar1	67	90.411	ENSAPOG00000019754	gar1	51	98.148	Acanthochromis_polyacanthus
ENSORLG00015017643	gar1	67	90.411	ENSAOCG00000020947	gar1	50	98.148	Amphiprion_ocellaris
ENSORLG00015017643	gar1	67	90.411	ENSAPEG00000001676	gar1	50	98.148	Amphiprion_percula
ENSORLG00015017643	gar1	62	89.706	ENSANAG00000021608	GAR1	69	82.667	Aotus_nancymaae
ENSORLG00015017643	gar1	50	97.273	ENSACLG00000010029	gar1	65	88.356	Astatotilapia_calliptera
ENSORLG00015017643	gar1	50	91.818	ENSAMXG00000015752	gar1	70	81.875	Astyanax_mexicanus
ENSORLG00015017643	gar1	62	89.706	ENSCJAG00000004041	GAR1	69	82.667	Callithrix_jacchus
ENSORLG00015017643	gar1	50	92.727	ENSCHIG00000016026	-	51	94.393	Capra_hircus
ENSORLG00015017643	gar1	62	89.706	ENSCCAG00000029372	GAR1	69	82.667	Cebus_capucinus
ENSORLG00015017643	gar1	50	92.727	ENSCATG00000021854	GAR1	54	94.393	Cercocebus_atys
ENSORLG00015017643	gar1	50	91.818	ENSCLAG00000005335	GAR1	69	96.364	Chinchilla_lanigera
ENSORLG00015017643	gar1	50	91.818	ENSCANG00000039262	GAR1	54	88.889	Colobus_angolensis_palliatus
ENSORLG00015017643	gar1	65	92.973	ENSCSEG00000003525	gar1	79	92.973	Cynoglossus_semilaevis
ENSORLG00015017643	gar1	51	92.793	ENSDORG00000000482	Gar1	54	89.744	Dipodomys_ordii
ENSORLG00015017643	gar1	50	94.545	ENSEASG00005004658	GAR1	50	96.262	Equus_asinus_asinus
ENSORLG00015017643	gar1	50	93.636	ENSECAG00000013624	GAR1	54	95.327	Equus_caballus
ENSORLG00015017643	gar1	63	50.704	ENSFCAG00000025841	-	50	60.748	Felis_catus
ENSORLG00015017643	gar1	51	96.396	ENSFHEG00000008068	gar1	50	96.296	Fundulus_heteroclitus
ENSORLG00015017643	gar1	51	73.874	ENSGGOG00000036205	-	53	75.701	Gorilla_gorilla
ENSORLG00015017643	gar1	50	94.545	ENSIPUG00000003194	gar1	63	87.970	Ictalurus_punctatus
ENSORLG00015017643	gar1	50	91.743	ENSSTOG00000005577	GAR1	71	96.364	Ictidomys_tridecemlineatus
ENSORLG00015017643	gar1	51	95.495	ENSKMAG00000010402	gar1	51	96.296	Kryptolebias_marmoratus
ENSORLG00015017643	gar1	58	97.368	ENSLBEG00000015647	gar1	67	88.806	Labrus_bergylta
ENSORLG00015017643	gar1	77	84.298	ENSLACG00000003306	GAR1	64	87.736	Latimeria_chalumnae
ENSORLG00015017643	gar1	78	75.882	ENSLOCG00000011711	GAR1	61	90.678	Lepisosteus_oculatus
ENSORLG00015017643	gar1	50	92.727	ENSMFAG00000024592	GAR1	54	89.744	Macaca_fascicularis
ENSORLG00015017643	gar1	50	92.727	ENSMMUG00000021225	GAR1	54	89.744	Macaca_mulatta
ENSORLG00015017643	gar1	50	92.727	ENSMNEG00000042594	GAR1	54	89.744	Macaca_nemestrina
ENSORLG00015017643	gar1	50	92.727	ENSMLEG00000002496	GAR1	54	89.744	Mandrillus_leucophaeus
ENSORLG00015017643	gar1	50	97.273	ENSMZEG00005001281	gar1	65	88.356	Maylandia_zebra
ENSORLG00015017643	gar1	50	92.727	ENSMUSG00000028010	Gar1	96	94.805	Mus_musculus
ENSORLG00015017643	gar1	50	92.727	MGP_PahariEiJ_G0027076	Gar1	96	94.805	Mus_pahari
ENSORLG00015017643	gar1	50	92.727	MGP_SPRETEiJ_G0026580	Gar1	96	94.805	Mus_spretus
ENSORLG00015017643	gar1	50	92.727	ENSNGAG00000008268	Gar1	71	96.364	Nannospalax_galili
ENSORLG00015017643	gar1	50	92.727	ENSNLEG00000016578	GAR1	50	94.393	Nomascus_leucogenys
ENSORLG00015017643	gar1	69	86.093	ENSODEG00000011083	GAR1	59	90.769	Octodon_degus
ENSORLG00015017643	gar1	62	88.971	ENSOCUG00000003901	GAR1	70	82.000	Oryctolagus_cuniculus
ENSORLG00015017643	gar1	100	99.091	ENSORLG00000020583	gar1	100	99.091	Oryzias_latipes
ENSORLG00015017643	gar1	100	99.091	ENSORLG00020008602	gar1	100	99.091	Oryzias_latipes_hni
ENSORLG00015017643	gar1	99	94.495	ENSOMEG00000007911	GAR1	77	94.495	Oryzias_melastigma
ENSORLG00015017643	gar1	69	82.119	ENSPPAG00000014081	GAR1	54	94.393	Pan_paniscus
ENSORLG00015017643	gar1	80	77.064	ENSPTRG00000049340	-	51	76.636	Pan_troglodytes
ENSORLG00015017643	gar1	50	92.727	ENSPTRG00000016364	GAR1	54	94.393	Pan_troglodytes
ENSORLG00015017643	gar1	50	92.727	ENSPANG00000000639	GAR1	54	89.744	Papio_anubis
ENSORLG00015017643	gar1	77	72.727	ENSPCAG00000015897	GAR1	54	75.207	Procavia_capensis
ENSORLG00015017643	gar1	51	76.786	ENSRBIG00000042411	-	52	77.570	Rhinopithecus_bieti
ENSORLG00015017643	gar1	50	92.727	ENSRROG00000028454	GAR1	54	94.393	Rhinopithecus_roxellana
ENSORLG00015017643	gar1	51	76.786	ENSRROG00000044348	-	51	77.570	Rhinopithecus_roxellana
ENSORLG00015017643	gar1	62	88.971	ENSSBOG00000024785	GAR1	68	84.247	Saimiri_boliviensis_boliviensis
ENSORLG00015017643	gar1	64	89.431	ENSSFOG00015013198	gar1	65	92.241	Scleropages_formosus
ENSORLG00015017643	gar1	78	82.353	ENSSMAG00000009976	gar1	50	94.444	Scophthalmus_maximus
ENSORLG00015017643	gar1	50	92.727	ENSSSCG00000009137	GAR1	53	94.393	Sus_scrofa