EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015017819 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 34650 bases
Position: chr7:17010898-17045547
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015032765	KH_1	PF00013.29	4.6e-51	1	3
ENSORLP00015032765	KH_1	PF00013.29	4.6e-51	2	3
ENSORLP00015032765	KH_1	PF00013.29	4.6e-51	3	3
ENSORLP00015032778	KH_1	PF00013.29	4.6e-51	1	3
ENSORLP00015032778	KH_1	PF00013.29	4.6e-51	2	3
ENSORLP00015032778	KH_1	PF00013.29	4.6e-51	3	3
ENSORLP00015032765	KH_2	PF07650.17	6.7e-15	1	1
ENSORLP00015032778	KH_2	PF07650.17	6.7e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015034463	-	2698	-	ENSORLP00015032778	457 (aa)	-	-
ENSORLT00015025069	-	2399	-	ENSORLP00015032765	457 (aa)	-	-

Gene Model

Click here to download ENSORLG00015017819's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015017819's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015017819	-	72	62.195	ENSORLG00015013439	PCBP2	96	62.195
ENSORLG00015017819	-	99	69.815	ENSORLG00015019262	pcbp4	98	70.431
ENSORLG00015017819	-	71	62.883	ENSORLG00015000429	pcbp3	95	62.883
ENSORLG00015017819	-	69	32.857	ENSORLG00015001778	igf2bp2b	61	38.356
ENSORLG00015017819	-	69	31.325	ENSORLG00015003412	-	69	31.325
ENSORLG00015017819	-	53	37.209	ENSORLG00015008779	fubp1	53	37.209
ENSORLG00015017819	-	54	50.000	ENSORLG00015008262	hnrnpk	58	50.000
ENSORLG00015017819	-	71	62.883	ENSORLG00015008051	-	92	62.883
ENSORLG00015017819	-	74	60.831	ENSORLG00015010679	pcbp2	98	60.831
ENSORLG00015017819	-	56	40.000	ENSORLG00015007890	-	59	40.000
ENSORLG00015017819	-	51	52.381	ENSORLG00015015118	hnrpkl	56	50.000
ENSORLG00015017819	-	71	36.111	ENSORLG00015007684	fubp3	78	36.111
ENSORLG00015017819	-	70	30.070	ENSORLG00015015563	igf2bp3	63	30.070

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015017819	-	96	57.175	ENSG00000090097	PCBP4	97	75.000	Homo_sapiens
ENSORLG00015017819	-	57	86.842	ENSAPOG00000018462	-	67	86.842	Acanthochromis_polyacanthus
ENSORLG00015017819	-	100	96.280	ENSAPOG00000009897	-	100	96.280	Acanthochromis_polyacanthus
ENSORLG00015017819	-	95	58.124	ENSAMEG00000009211	PCBP4	97	58.770	Ailuropoda_melanoleuca
ENSORLG00015017819	-	94	96.368	ENSACIG00000020434	-	100	96.368	Amphilophus_citrinellus
ENSORLG00015017819	-	94	73.934	ENSACIG00000015264	pcbp4	89	75.829	Amphilophus_citrinellus
ENSORLG00015017819	-	98	92.377	ENSAOCG00000021366	-	100	92.377	Amphiprion_ocellaris
ENSORLG00015017819	-	94	63.520	ENSAOCG00000006924	-	100	64.541	Amphiprion_ocellaris
ENSORLG00015017819	-	88	68.305	ENSAPEG00000009555	-	78	85.577	Amphiprion_percula
ENSORLG00015017819	-	94	75.837	ENSAPEG00000023157	pcbp4	100	76.316	Amphiprion_percula
ENSORLG00015017819	-	98	90.222	ENSATEG00000006511	-	100	90.222	Anabas_testudineus
ENSORLG00015017819	-	89	69.492	ENSATEG00000008529	pcbp4	93	69.231	Anabas_testudineus
ENSORLG00015017819	-	95	62.785	ENSACAG00000011701	PCBP4	97	62.329	Anolis_carolinensis
ENSORLG00015017819	-	96	57.175	ENSANAG00000023072	PCBP4	99	58.036	Aotus_nancymaae
ENSORLG00015017819	-	98	73.029	ENSACLG00000013348	pcbp4	100	71.571	Astatotilapia_calliptera
ENSORLG00015017819	-	100	95.842	ENSACLG00000025246	-	100	95.842	Astatotilapia_calliptera
ENSORLG00015017819	-	100	81.330	ENSAMXG00000033125	pcbp4	100	81.545	Astyanax_mexicanus
ENSORLG00015017819	-	95	57.895	ENSBTAG00000018622	PCBP4	97	58.770	Bos_taurus
ENSORLG00015017819	-	96	57.399	ENSCJAG00000005783	PCBP4	99	58.259	Callithrix_jacchus
ENSORLG00015017819	-	95	58.124	ENSCAFG00000010019	PCBP4	97	58.770	Canis_familiaris
ENSORLG00015017819	-	95	58.124	ENSCAFG00020022361	PCBP4	97	58.770	Canis_lupus_dingo
ENSORLG00015017819	-	95	58.124	ENSCHIG00000012918	PCBP4	97	58.770	Capra_hircus
ENSORLG00015017819	-	95	58.124	ENSTSYG00000008765	PCBP4	97	58.770	Carlito_syrichta
ENSORLG00015017819	-	95	57.666	ENSCAPG00000005895	PCBP4	97	58.314	Cavia_aperea
ENSORLG00015017819	-	95	57.895	ENSCPOG00000014617	PCBP4	97	58.542	Cavia_porcellus
ENSORLG00015017819	-	96	57.623	ENSCCAG00000033268	PCBP4	99	58.259	Cebus_capucinus
ENSORLG00015017819	-	96	57.623	ENSCATG00000032034	PCBP4	99	58.259	Cercocebus_atys
ENSORLG00015017819	-	95	57.666	ENSCLAG00000008356	PCBP4	97	58.542	Chinchilla_lanigera
ENSORLG00015017819	-	96	57.623	ENSCSAG00000013913	PCBP4	99	58.259	Chlorocebus_sabaeus
ENSORLG00015017819	-	95	62.100	ENSCPBG00000016554	PCBP4	95	62.100	Chrysemys_picta_bellii
ENSORLG00015017819	-	96	57.623	ENSCANG00000038865	PCBP4	99	58.259	Colobus_angolensis_palliatus
ENSORLG00015017819	-	95	57.895	ENSCGRG00001014953	Pcbp4	97	58.770	Cricetulus_griseus_chok1gshd
ENSORLG00015017819	-	95	57.895	ENSCGRG00000008617	Pcbp4	97	58.770	Cricetulus_griseus_crigri
ENSORLG00015017819	-	98	69.520	ENSCSEG00000014487	pcbp4	95	70.772	Cynoglossus_semilaevis
ENSORLG00015017819	-	98	84.375	ENSCSEG00000021041	PCBP4	100	84.375	Cynoglossus_semilaevis
ENSORLG00015017819	-	94	66.667	ENSCVAG00000003674	pcbp4	98	65.899	Cyprinodon_variegatus
ENSORLG00015017819	-	100	93.873	ENSCVAG00000013090	-	100	93.873	Cyprinodon_variegatus
ENSORLG00015017819	-	100	80.000	ENSDARG00000024276	pcbp4	100	80.587	Danio_rerio
ENSORLG00015017819	-	92	79.167	ENSDNOG00000033951	PCBP4	87	72.289	Dasypus_novemcinctus
ENSORLG00015017819	-	95	57.666	ENSDORG00000000573	Pcbp4	97	58.314	Dipodomys_ordii
ENSORLG00015017819	-	63	56.090	ENSETEG00000001778	PCBP4	96	56.090	Echinops_telfairi
ENSORLG00015017819	-	95	57.666	ENSEASG00005012889	PCBP4	97	58.542	Equus_asinus_asinus
ENSORLG00015017819	-	95	57.666	ENSECAG00000024218	PCBP4	97	58.542	Equus_caballus
ENSORLG00015017819	-	100	75.523	ENSELUG00000018204	pcbp4	100	76.050	Esox_lucius
ENSORLG00015017819	-	100	86.393	ENSELUG00000001870	-	100	86.393	Esox_lucius
ENSORLG00015017819	-	95	57.895	ENSFCAG00000009148	PCBP4	97	58.770	Felis_catus
ENSORLG00015017819	-	93	58.372	ENSFALG00000008831	PCBP4	95	58.837	Ficedula_albicollis
ENSORLG00015017819	-	95	57.437	ENSFDAG00000012692	PCBP4	97	58.087	Fukomys_damarensis
ENSORLG00015017819	-	94	70.720	ENSFHEG00000002769	-	97	70.720	Fundulus_heteroclitus
ENSORLG00015017819	-	98	87.277	ENSGMOG00000017799	-	100	87.277	Gadus_morhua
ENSORLG00015017819	-	95	58.219	ENSGALG00000027695	PCBP4	97	58.447	Gallus_gallus
ENSORLG00015017819	-	83	93.386	ENSGAFG00000021090	-	78	95.640	Gambusia_affinis
ENSORLG00015017819	-	51	88.079	ENSGAFG00000018301	pcbp4	63	88.079	Gambusia_affinis
ENSORLG00015017819	-	98	90.179	ENSGACG00000002664	-	100	90.848	Gasterosteus_aculeatus
ENSORLG00015017819	-	95	62.329	ENSGAGG00000022116	PCBP4	95	62.329	Gopherus_agassizii
ENSORLG00015017819	-	96	57.175	ENSGGOG00000012474	PCBP4	99	58.036	Gorilla_gorilla
ENSORLG00015017819	-	100	95.624	ENSHBUG00000005329	-	100	95.624	Haplochromis_burtoni
ENSORLG00015017819	-	98	72.822	ENSHBUG00000009472	pcbp4	100	71.372	Haplochromis_burtoni
ENSORLG00015017819	-	95	57.895	ENSHGLG00000012018	PCBP4	97	58.770	Heterocephalus_glaber_female
ENSORLG00015017819	-	95	56.364	ENSHGLG00100008748	PCBP4	97	57.014	Heterocephalus_glaber_male
ENSORLG00015017819	-	100	88.210	ENSHCOG00000010838	-	97	94.904	Hippocampus_comes
ENSORLG00015017819	-	100	82.174	ENSIPUG00000008212	pcbp4	100	82.174	Ictalurus_punctatus
ENSORLG00015017819	-	95	56.293	ENSSTOG00000002573	PCBP4	97	56.948	Ictidomys_tridecemlineatus
ENSORLG00015017819	-	95	57.895	ENSJJAG00000016235	Pcbp4	97	58.770	Jaculus_jaculus
ENSORLG00015017819	-	100	95.186	ENSKMAG00000017554	-	100	95.186	Kryptolebias_marmoratus
ENSORLG00015017819	-	98	75.641	ENSKMAG00000014252	pcbp4	96	75.906	Kryptolebias_marmoratus
ENSORLG00015017819	-	100	94.311	ENSLBEG00000011345	-	100	94.311	Labrus_bergylta
ENSORLG00015017819	-	100	65.652	ENSLACG00000015899	PCBP4	98	73.707	Latimeria_chalumnae
ENSORLG00015017819	-	100	79.521	ENSLOCG00000013402	pcbp4	100	80.217	Lepisosteus_oculatus
ENSORLG00015017819	-	99	55.309	ENSLAFG00000010732	PCBP4	100	56.020	Loxodonta_africana
ENSORLG00015017819	-	96	57.623	ENSMFAG00000001431	PCBP4	99	58.259	Macaca_fascicularis
ENSORLG00015017819	-	96	57.623	ENSMMUG00000022205	PCBP4	99	58.259	Macaca_mulatta
ENSORLG00015017819	-	96	57.623	ENSMNEG00000028553	PCBP4	99	58.259	Macaca_nemestrina
ENSORLG00015017819	-	96	57.623	ENSMLEG00000027083	PCBP4	99	58.259	Mandrillus_leucophaeus
ENSORLG00015017819	-	98	73.795	ENSMAMG00000010163	pcbp4	95	74.268	Mastacembelus_armatus
ENSORLG00015017819	-	100	95.624	ENSMAMG00000011364	-	100	95.624	Mastacembelus_armatus
ENSORLG00015017819	-	98	73.029	ENSMZEG00005008852	pcbp4	100	71.571	Maylandia_zebra
ENSORLG00015017819	-	100	95.842	ENSMZEG00005023631	-	100	95.842	Maylandia_zebra
ENSORLG00015017819	-	58	73.656	ENSMGAG00000005091	-	85	73.656	Meleagris_gallopavo
ENSORLG00015017819	-	64	53.023	ENSMGAG00000003895	-	99	52.093	Meleagris_gallopavo
ENSORLG00015017819	-	95	57.895	ENSMAUG00000021064	Pcbp4	97	58.770	Mesocricetus_auratus
ENSORLG00015017819	-	95	58.124	ENSMICG00000002686	PCBP4	97	58.770	Microcebus_murinus
ENSORLG00015017819	-	95	58.352	ENSMOCG00000013557	Pcbp4	97	59.226	Microtus_ochrogaster
ENSORLG00015017819	-	72	61.755	ENSMMOG00000017756	pcbp4	97	61.514	Mola_mola
ENSORLG00015017819	-	98	89.462	ENSMMOG00000020533	-	100	89.462	Mola_mola
ENSORLG00015017819	-	95	58.352	ENSMODG00000011790	PCBP4	82	58.352	Monodelphis_domestica
ENSORLG00015017819	-	94	95.431	ENSMALG00000022117	-	100	95.148	Monopterus_albus
ENSORLG00015017819	-	89	79.227	ENSMALG00000020318	pcbp4	91	77.189	Monopterus_albus
ENSORLG00015017819	-	95	57.895	MGP_CAROLIEiJ_G0032623	Pcbp4	89	79.245	Mus_caroli
ENSORLG00015017819	-	95	57.895	ENSMUSG00000023495	Pcbp4	91	80.741	Mus_musculus
ENSORLG00015017819	-	95	57.895	MGP_PahariEiJ_G0015491	Pcbp4	89	79.245	Mus_pahari
ENSORLG00015017819	-	95	57.895	MGP_SPRETEiJ_G0033768	-	89	79.245	Mus_spretus
ENSORLG00015017819	-	95	57.895	ENSMPUG00000011766	PCBP4	97	58.770	Mustela_putorius_furo
ENSORLG00015017819	-	95	57.895	ENSNGAG00000013148	Pcbp4	97	58.770	Nannospalax_galili
ENSORLG00015017819	-	94	62.054	ENSNBRG00000007475	pcbp4	98	62.054	Neolamprologus_brichardi
ENSORLG00015017819	-	98	92.152	ENSNBRG00000015885	-	100	92.152	Neolamprologus_brichardi
ENSORLG00015017819	-	96	57.623	ENSNLEG00000007064	PCBP4	99	58.259	Nomascus_leucogenys
ENSORLG00015017819	-	88	48.559	ENSMEUG00000006917	PCBP4	95	48.330	Notamacropus_eugenii
ENSORLG00015017819	-	88	51.016	ENSOPRG00000008763	PCBP4	98	51.116	Ochotona_princeps
ENSORLG00015017819	-	95	57.666	ENSODEG00000018230	PCBP4	97	58.542	Octodon_degus
ENSORLG00015017819	-	95	57.569	ENSOANG00000014110	PCBP4	94	57.763	Ornithorhynchus_anatinus
ENSORLG00015017819	-	95	58.124	ENSOCUG00000025336	PCBP4	97	58.770	Oryctolagus_cuniculus
ENSORLG00015017819	-	98	95.078	ENSORLG00000009899	-	100	95.078	Oryzias_latipes
ENSORLG00015017819	-	98	71.579	ENSORLG00000003061	pcbp4	96	72.421	Oryzias_latipes
ENSORLG00015017819	-	100	99.562	ENSORLG00020001183	-	100	99.562	Oryzias_latipes_hni
ENSORLG00015017819	-	100	98.906	ENSOMEG00000011545	-	100	98.906	Oryzias_melastigma
ENSORLG00015017819	-	98	69.936	ENSOMEG00000003516	-	96	70.149	Oryzias_melastigma
ENSORLG00015017819	-	95	57.895	ENSOGAG00000032384	PCBP4	97	58.542	Otolemur_garnettii
ENSORLG00015017819	-	99	56.416	ENSOARG00000006603	PCBP4	100	57.108	Ovis_aries
ENSORLG00015017819	-	96	57.175	ENSPPAG00000038764	PCBP4	99	58.036	Pan_paniscus
ENSORLG00015017819	-	95	57.895	ENSPPRG00000006165	PCBP4	97	58.770	Panthera_pardus
ENSORLG00015017819	-	95	57.895	ENSPTIG00000005401	PCBP4	93	58.770	Panthera_tigris_altaica
ENSORLG00015017819	-	96	57.175	ENSPTRG00000014983	PCBP4	99	58.036	Pan_troglodytes
ENSORLG00015017819	-	96	57.623	ENSPANG00000026222	PCBP4	99	58.259	Papio_anubis
ENSORLG00015017819	-	100	74.017	ENSPKIG00000005487	-	100	74.017	Paramormyrops_kingsleyae
ENSORLG00015017819	-	100	81.659	ENSPKIG00000010244	pcbp4	100	82.096	Paramormyrops_kingsleyae
ENSORLG00015017819	-	79	58.808	ENSPSIG00000011286	PCBP4	96	57.622	Pelodiscus_sinensis
ENSORLG00015017819	-	98	83.221	ENSPMGG00000022732	-	100	83.445	Periophthalmus_magnuspinnatus
ENSORLG00015017819	-	94	73.571	ENSPMGG00000000063	pcbp4	99	73.810	Periophthalmus_magnuspinnatus
ENSORLG00015017819	-	95	57.895	ENSPEMG00000009276	Pcbp4	97	58.770	Peromyscus_maniculatus_bairdii
ENSORLG00015017819	-	95	59.039	ENSPCIG00000018151	PCBP4	93	59.039	Phascolarctos_cinereus
ENSORLG00015017819	-	100	94.748	ENSPFOG00000002989	-	100	94.748	Poecilia_formosa
ENSORLG00015017819	-	95	70.312	ENSPFOG00000014474	pcbp4	96	81.423	Poecilia_formosa
ENSORLG00015017819	-	89	64.916	ENSPLAG00000011438	-	98	64.916	Poecilia_latipinna
ENSORLG00015017819	-	93	69.191	ENSPLAG00000023316	pcbp4	89	70.496	Poecilia_latipinna
ENSORLG00015017819	-	60	61.092	ENSPMEG00000012990	pcbp4	100	62.416	Poecilia_mexicana
ENSORLG00015017819	-	98	85.650	ENSPREG00000017370	-	100	85.650	Poecilia_reticulata
ENSORLG00015017819	-	73	57.338	ENSPREG00000021498	-	81	57.338	Poecilia_reticulata
ENSORLG00015017819	-	96	57.399	ENSPPYG00000013822	PCBP4	99	58.259	Pongo_abelii
ENSORLG00015017819	-	88	51.826	ENSPCAG00000009515	PCBP4	97	51.826	Procavia_capensis
ENSORLG00015017819	-	95	58.124	ENSPCOG00000027535	PCBP4	97	58.770	Propithecus_coquereli
ENSORLG00015017819	-	88	49.123	ENSPVAG00000012474	PCBP4	97	49.127	Pteropus_vampyrus
ENSORLG00015017819	-	98	91.704	ENSPNYG00000003098	-	100	91.704	Pundamilia_nyererei
ENSORLG00015017819	-	94	71.847	ENSPNYG00000019234	pcbp4	100	72.072	Pundamilia_nyererei
ENSORLG00015017819	-	100	81.720	ENSPNAG00000025434	pcbp4	100	82.151	Pygocentrus_nattereri
ENSORLG00015017819	-	95	57.895	ENSRNOG00000012406	Pcbp4	97	58.770	Rattus_norvegicus
ENSORLG00015017819	-	96	57.623	ENSRBIG00000043793	PCBP4	99	58.259	Rhinopithecus_bieti
ENSORLG00015017819	-	96	57.623	ENSRROG00000034589	PCBP4	99	58.259	Rhinopithecus_roxellana
ENSORLG00015017819	-	96	57.623	ENSSBOG00000027029	PCBP4	99	58.259	Saimiri_boliviensis_boliviensis
ENSORLG00015017819	-	77	58.238	ENSSHAG00000007362	PCBP4	100	58.238	Sarcophilus_harrisii
ENSORLG00015017819	-	100	74.130	ENSSFOG00015012075	PCBP4	100	74.130	Scleropages_formosus
ENSORLG00015017819	-	70	80.844	ENSSFOG00015008221	pcbp4	60	80.844	Scleropages_formosus
ENSORLG00015017819	-	100	93.668	ENSSMAG00000009392	-	99	93.668	Scophthalmus_maximus
ENSORLG00015017819	-	98	74.737	ENSSMAG00000005827	pcbp4	95	75.157	Scophthalmus_maximus
ENSORLG00015017819	-	98	92.601	ENSSDUG00000015540	-	100	92.601	Seriola_dumerili
ENSORLG00015017819	-	94	75.663	ENSSDUG00000017719	pcbp4	97	76.202	Seriola_dumerili
ENSORLG00015017819	-	98	92.601	ENSSLDG00000007851	-	100	92.601	Seriola_lalandi_dorsalis
ENSORLG00015017819	-	58	84.177	ENSSLDG00000024847	-	77	84.177	Seriola_lalandi_dorsalis
ENSORLG00015017819	-	95	57.011	ENSSPUG00000000194	PCBP4	97	57.241	Sphenodon_punctatus
ENSORLG00015017819	-	100	95.624	ENSSPAG00000003033	-	100	95.624	Stegastes_partitus
ENSORLG00015017819	-	94	63.472	ENSSPAG00000019058	-	98	63.472	Stegastes_partitus
ENSORLG00015017819	-	95	57.895	ENSSSCG00000028446	PCBP4	97	58.770	Sus_scrofa
ENSORLG00015017819	-	70	57.585	ENSTGUG00000006393	PCBP4	96	57.585	Taeniopygia_guttata
ENSORLG00015017819	-	98	88.341	ENSTRUG00000007426	-	100	88.341	Takifugu_rubripes
ENSORLG00015017819	-	98	85.459	ENSTNIG00000017887	-	100	85.459	Tetraodon_nigroviridis
ENSORLG00015017819	-	79	38.916	ENSTBEG00000015770	PCBP4	100	39.706	Tupaia_belangeri
ENSORLG00015017819	-	69	53.968	ENSTTRG00000001443	PCBP4	83	54.450	Tursiops_truncatus
ENSORLG00015017819	-	94	54.424	ENSUAMG00000020871	PCBP4	100	54.933	Ursus_americanus
ENSORLG00015017819	-	86	59.453	ENSUMAG00000021609	PCBP4	93	58.513	Ursus_maritimus
ENSORLG00015017819	-	95	58.124	ENSVVUG00000026857	PCBP4	97	58.770	Vulpes_vulpes
ENSORLG00015017819	-	94	84.097	ENSXCOG00000000111	-	100	84.097	Xiphophorus_couchianus
ENSORLG00015017819	-	50	87.333	ENSXCOG00000017325	pcbp4	63	87.333	Xiphophorus_couchianus
ENSORLG00015017819	-	78	82.222	ENSXMAG00000015709	pcbp4	75	82.222	Xiphophorus_maculatus
ENSORLG00015017819	-	84	66.995	ENSXMAG00000022188	-	90	68.227	Xiphophorus_maculatus
ENSORLG00015017819	-	100	94.311	ENSXMAG00000024530	-	100	94.311	Xiphophorus_maculatus