EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015017959 (Gene tree)
Gene ID: -
Gene Symbol: plecb
Alias: -
Full Name: plectin b
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 59885 bases
Position: chr16:3184475-3244359
Accession: ZDB-GENE-100917-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015016878	S10_plectin	PF03501.15	1.1e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015025195	-	13305	-	ENSORLP00015032834	4434 (aa)	-	-
ENSORLT00015034490	-	16608	-	ENSORLP00015016878	5535 (aa)	-	-
ENSORLT00015025083	-	13548	-	ENSORLP00015032767	4515 (aa)	-	-

Gene Model

Click here to download ENSORLG00015017959's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015017959's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015017959	plecb	97	79.938	ENSATEG00000024559	plecb	95	79.946	Anabas_testudineus
ENSORLG00015017959	plecb	100	78.686	ENSACLG00000022613	plecb	100	78.740	Astatotilapia_calliptera
ENSORLG00015017959	plecb	99	83.115	ENSCVAG00000013972	plecb	94	82.962	Cyprinodon_variegatus
ENSORLG00015017959	plecb	86	76.798	ENSELUG00000020803	plecb	88	76.761	Esox_lucius
ENSORLG00015017959	plecb	84	78.770	ENSGMOG00000006545	plecb	99	78.967	Gadus_morhua
ENSORLG00015017959	plecb	84	84.018	ENSGACG00000005431	plecb	99	84.185	Gasterosteus_aculeatus
ENSORLG00015017959	plecb	90	72.213	ENSIPUG00000020055	plecb	87	73.452	Ictalurus_punctatus
ENSORLG00015017959	plecb	83	86.260	ENSKMAG00000003609	plecb	99	86.263	Kryptolebias_marmoratus
ENSORLG00015017959	plecb	99	76.247	ENSLBEG00000004779	plecb	96	77.649	Labrus_bergylta
ENSORLG00015017959	plecb	98	79.765	ENSMAMG00000001487	plecb	97	79.639	Mastacembelus_armatus
ENSORLG00015017959	plecb	83	71.027	ENSONIG00000013803	pleca	99	71.011	Oreochromis_niloticus
ENSORLG00015017959	plecb	100	98.917	ENSORLG00000023311	plecb	100	98.917	Oryzias_latipes
ENSORLG00015017959	plecb	100	98.917	ENSORLG00020001716	plecb	100	98.917	Oryzias_latipes_hni
ENSORLG00015017959	plecb	100	91.062	ENSOMEG00000011949	plecb	100	91.170	Oryzias_melastigma
ENSORLG00015017959	plecb	84	71.530	ENSPKIG00000014989	pleca	89	71.597	Paramormyrops_kingsleyae
ENSORLG00015017959	plecb	99	77.738	ENSPMEG00000014762	plecb	100	77.778	Poecilia_mexicana
ENSORLG00015017959	plecb	99	77.404	ENSPREG00000014625	plecb	100	77.329	Poecilia_reticulata
ENSORLG00015017959	plecb	90	74.769	ENSPNAG00000001581	plecb	85	74.609	Pygocentrus_nattereri
ENSORLG00015017959	plecb	99	75.049	ENSTRUG00000003715	plecb	99	75.098	Takifugu_rubripes