EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015018077 (Gene tree)
Gene ID: -
Gene Symbol: synj1
Alias: -
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 21848 bases
Position: chr14:10952218-10974065
Accession: ZDB-GENE-030131-9180
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015017027	Exo_endo_phos	PF03372.23	1.8e-13	1	1
ENSORLP00015032969	Exo_endo_phos	PF03372.23	1.8e-13	1	1
ENSORLP00015017027	DUF1866	PF08952.11	4.3e-53	1	1
ENSORLP00015032969	DUF1866	PF08952.11	4.4e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015034573	-	5089	-	ENSORLP00015032969	1684 (aa)	-	-
ENSORLT00015025380	-	5065	-	ENSORLP00015017027	1676 (aa)	-	-

Gene Model

Click here to download ENSORLG00015018077's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015018077's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015018077	synj1	95	61.529	ENSG00000159082	SYNJ1	100	81.923	Homo_sapiens
ENSORLG00015018077	synj1	71	91.464	ENSAPOG00000002809	synj1	98	83.983	Acanthochromis_polyacanthus
ENSORLG00015018077	synj1	97	78.488	ENSACIG00000008857	synj1	99	86.139	Amphilophus_citrinellus
ENSORLG00015018077	synj1	95	84.554	ENSAOCG00000009835	synj1	99	86.774	Amphiprion_ocellaris
ENSORLG00015018077	synj1	95	83.835	ENSAPEG00000021010	synj1	98	84.477	Amphiprion_percula
ENSORLG00015018077	synj1	95	82.812	ENSATEG00000002306	synj1	98	83.591	Anabas_testudineus
ENSORLG00015018077	synj1	95	57.869	ENSAPLG00000011832	SYNJ1	68	75.572	Anas_platyrhynchos
ENSORLG00015018077	synj1	77	66.593	ENSACAG00000003006	-	84	76.091	Anolis_carolinensis
ENSORLG00015018077	synj1	95	58.784	ENSANAG00000027325	SYNJ1	84	75.249	Aotus_nancymaae
ENSORLG00015018077	synj1	95	84.758	ENSACLG00000002255	synj1	98	84.139	Astatotilapia_calliptera
ENSORLG00015018077	synj1	95	74.770	ENSAMXG00000008208	synj1	99	74.421	Astyanax_mexicanus
ENSORLG00015018077	synj1	93	61.438	ENSBTAG00000003063	SYNJ1	83	76.091	Bos_taurus
ENSORLG00015018077	synj1	95	61.443	ENSCJAG00000009187	SYNJ1	88	75.594	Callithrix_jacchus
ENSORLG00015018077	synj1	95	58.460	ENSCAFG00000009041	SYNJ1	86	74.954	Canis_familiaris
ENSORLG00015018077	synj1	88	75.545	ENSCAFG00020025776	SYNJ1	89	75.455	Canis_lupus_dingo
ENSORLG00015018077	synj1	85	75.771	ENSCHIG00000005095	SYNJ1	89	75.818	Capra_hircus
ENSORLG00015018077	synj1	93	62.270	ENSTSYG00000014541	SYNJ1	85	75.136	Carlito_syrichta
ENSORLG00015018077	synj1	67	64.164	ENSCAPG00000014483	SYNJ1	75	65.849	Cavia_aperea
ENSORLG00015018077	synj1	93	61.824	ENSCPOG00000012182	SYNJ1	85	75.159	Cavia_porcellus
ENSORLG00015018077	synj1	95	60.472	ENSCCAG00000020825	SYNJ1	84	75.159	Cebus_capucinus
ENSORLG00015018077	synj1	95	60.174	ENSCATG00000033891	SYNJ1	86	75.686	Cercocebus_atys
ENSORLG00015018077	synj1	93	60.564	ENSCLAG00000009796	SYNJ1	100	81.727	Chinchilla_lanigera
ENSORLG00015018077	synj1	73	68.466	ENSCSAG00000009654	SYNJ1	83	75.408	Chlorocebus_sabaeus
ENSORLG00015018077	synj1	77	71.375	ENSCHOG00000012390	SYNJ1	54	71.561	Choloepus_hoffmanni
ENSORLG00015018077	synj1	70	71.947	ENSCPBG00000006402	SYNJ1	87	76.374	Chrysemys_picta_bellii
ENSORLG00015018077	synj1	95	61.730	ENSCANG00000031359	SYNJ1	84	75.408	Colobus_angolensis_palliatus
ENSORLG00015018077	synj1	80	68.565	ENSCGRG00001010861	Synj1	83	75.023	Cricetulus_griseus_chok1gshd
ENSORLG00015018077	synj1	77	66.154	ENSCGRG00000015749	Synj1	100	81.583	Cricetulus_griseus_crigri
ENSORLG00015018077	synj1	74	87.510	ENSCSEG00000019614	synj1	94	90.234	Cynoglossus_semilaevis
ENSORLG00015018077	synj1	90	81.854	ENSCVAG00000019250	synj1	98	81.246	Cyprinodon_variegatus
ENSORLG00015018077	synj1	78	81.217	ENSDARG00000025011	synj1	100	81.085	Danio_rerio
ENSORLG00015018077	synj1	85	62.551	ENSDNOG00000010732	SYNJ1	70	72.514	Dasypus_novemcinctus
ENSORLG00015018077	synj1	95	61.382	ENSEASG00005006287	SYNJ1	96	77.884	Equus_asinus_asinus
ENSORLG00015018077	synj1	95	61.477	ENSECAG00000004829	SYNJ1	90	76.103	Equus_caballus
ENSORLG00015018077	synj1	79	70.446	ENSEEUG00000005150	SYNJ1	59	70.446	Erinaceus_europaeus
ENSORLG00015018077	synj1	89	74.603	ENSELUG00000009731	synj1	99	73.510	Esox_lucius
ENSORLG00015018077	synj1	94	61.395	ENSFCAG00000012498	SYNJ1	84	75.455	Felis_catus
ENSORLG00015018077	synj1	73	51.047	ENSFALG00000004680	SYNJ1	61	69.594	Ficedula_albicollis
ENSORLG00015018077	synj1	95	80.935	ENSFHEG00000017689	synj1	98	81.503	Fundulus_heteroclitus
ENSORLG00015018077	synj1	62	85.035	ENSGMOG00000014852	synj1	77	84.706	Gadus_morhua
ENSORLG00015018077	synj1	92	61.959	ENSGALG00000034317	SYNJ1	70	76.063	Gallus_gallus
ENSORLG00015018077	synj1	96	82.488	ENSGAFG00000019466	synj1	99	81.841	Gambusia_affinis
ENSORLG00015018077	synj1	78	81.567	ENSGACG00000020575	synj1	99	82.840	Gasterosteus_aculeatus
ENSORLG00015018077	synj1	93	62.232	ENSGAGG00000022523	SYNJ1	83	75.336	Gopherus_agassizii
ENSORLG00015018077	synj1	95	58.728	ENSGGOG00000015945	SYNJ1	86	75.777	Gorilla_gorilla
ENSORLG00015018077	synj1	95	83.537	ENSHBUG00000007774	synj1	94	91.985	Haplochromis_burtoni
ENSORLG00015018077	synj1	93	58.788	ENSHGLG00000006420	SYNJ1	100	81.151	Heterocephalus_glaber_female
ENSORLG00015018077	synj1	93	59.848	ENSHGLG00100012591	SYNJ1	100	81.151	Heterocephalus_glaber_male
ENSORLG00015018077	synj1	74	92.184	ENSHCOG00000012774	synj1	82	92.184	Hippocampus_comes
ENSORLG00015018077	synj1	87	77.415	ENSIPUG00000010691	SYNJ1	98	72.733	Ictalurus_punctatus
ENSORLG00015018077	synj1	93	59.463	ENSSTOG00000015806	SYNJ1	83	75.366	Ictidomys_tridecemlineatus
ENSORLG00015018077	synj1	93	57.654	ENSJJAG00000020168	Synj1	86	70.513	Jaculus_jaculus
ENSORLG00015018077	synj1	97	78.954	ENSKMAG00000004221	synj1	87	91.098	Kryptolebias_marmoratus
ENSORLG00015018077	synj1	88	84.595	ENSLBEG00000015081	synj1	99	83.856	Labrus_bergylta
ENSORLG00015018077	synj1	92	60.528	ENSLACG00000005928	SYNJ1	71	75.223	Latimeria_chalumnae
ENSORLG00015018077	synj1	93	65.370	ENSLOCG00000009230	synj1	90	82.016	Lepisosteus_oculatus
ENSORLG00015018077	synj1	95	58.267	ENSLAFG00000011806	SYNJ1	69	75.455	Loxodonta_africana
ENSORLG00015018077	synj1	93	60.495	ENSMFAG00000018883	SYNJ1	84	74.254	Macaca_fascicularis
ENSORLG00015018077	synj1	95	59.275	ENSMMUG00000004624	SYNJ1	83	75.499	Macaca_mulatta
ENSORLG00015018077	synj1	95	61.362	ENSMNEG00000040077	SYNJ1	91	75.686	Macaca_nemestrina
ENSORLG00015018077	synj1	95	61.481	ENSMLEG00000037029	SYNJ1	84	75.318	Mandrillus_leucophaeus
ENSORLG00015018077	synj1	95	83.292	ENSMAMG00000013404	synj1	98	84.116	Mastacembelus_armatus
ENSORLG00015018077	synj1	95	84.834	ENSMZEG00005024358	synj1	100	88.729	Maylandia_zebra
ENSORLG00015018077	synj1	86	62.792	ENSMGAG00000014522	SYNJ1	69	74.453	Meleagris_gallopavo
ENSORLG00015018077	synj1	77	66.081	ENSMAUG00000009743	Synj1	100	81.439	Mesocricetus_auratus
ENSORLG00015018077	synj1	93	62.010	ENSMICG00000034953	SYNJ1	86	75.777	Microcebus_murinus
ENSORLG00015018077	synj1	78	81.439	ENSMMOG00000010203	synj1	99	83.194	Mola_mola
ENSORLG00015018077	synj1	64	72.007	ENSMODG00000021073	SYNJ1	82	71.639	Monodelphis_domestica
ENSORLG00015018077	synj1	95	81.729	ENSMALG00000014015	synj1	98	82.670	Monopterus_albus
ENSORLG00015018077	synj1	94	58.535	MGP_CAROLIEiJ_G0020951	Synj1	100	81.439	Mus_caroli
ENSORLG00015018077	synj1	95	58.697	ENSMUSG00000022973	Synj1	100	81.439	Mus_musculus
ENSORLG00015018077	synj1	93	59.316	MGP_PahariEiJ_G0016656	Synj1	100	81.439	Mus_pahari
ENSORLG00015018077	synj1	95	59.050	MGP_SPRETEiJ_G0021857	Synj1	100	81.727	Mus_spretus
ENSORLG00015018077	synj1	93	59.108	ENSMPUG00000001153	SYNJ1	70	75.385	Mustela_putorius_furo
ENSORLG00015018077	synj1	73	67.380	ENSNGAG00000000453	Synj1	100	81.439	Nannospalax_galili
ENSORLG00015018077	synj1	95	78.554	ENSNBRG00000011936	synj1	94	85.855	Neolamprologus_brichardi
ENSORLG00015018077	synj1	84	56.755	ENSNLEG00000003734	SYNJ1	84	73.855	Nomascus_leucogenys
ENSORLG00015018077	synj1	58	64.251	ENSMEUG00000004158	-	65	62.801	Notamacropus_eugenii
ENSORLG00015018077	synj1	86	76.970	ENSOPRG00000013602	SYNJ1	53	76.970	Ochotona_princeps
ENSORLG00015018077	synj1	86	80.520	ENSONIG00000004667	synj1	78	91.818	Oreochromis_niloticus
ENSORLG00015018077	synj1	72	65.632	ENSOANG00000006929	SYNJ1	69	73.458	Ornithorhynchus_anatinus
ENSORLG00015018077	synj1	86	62.732	ENSOCUG00000001420	SYNJ1	67	76.702	Oryctolagus_cuniculus
ENSORLG00015018077	synj1	100	97.253	ENSORLG00000004320	synj1	100	97.253	Oryzias_latipes
ENSORLG00015018077	synj1	78	95.451	ENSORLG00020011994	synj1	98	95.451	Oryzias_latipes_hni
ENSORLG00015018077	synj1	99	90.496	ENSOMEG00000014322	synj1	99	92.319	Oryzias_melastigma
ENSORLG00015018077	synj1	86	60.263	ENSOGAG00000006010	SYNJ1	68	72.127	Otolemur_garnettii
ENSORLG00015018077	synj1	93	59.450	ENSOARG00000013414	SYNJ1	68	75.068	Ovis_aries
ENSORLG00015018077	synj1	86	65.914	ENSPPAG00000026784	SYNJ1	84	75.499	Pan_paniscus
ENSORLG00015018077	synj1	93	62.318	ENSPPRG00000023469	SYNJ1	84	75.455	Panthera_pardus
ENSORLG00015018077	synj1	93	62.302	ENSPTIG00000007930	SYNJ1	84	75.545	Panthera_tigris_altaica
ENSORLG00015018077	synj1	95	61.529	ENSPTRG00000048135	-	86	75.777	Pan_troglodytes
ENSORLG00015018077	synj1	95	58.537	ENSPTRG00000023787	SYNJ1	86	75.777	Pan_troglodytes
ENSORLG00015018077	synj1	95	61.481	ENSPANG00000022531	SYNJ1	90	75.686	Papio_anubis
ENSORLG00015018077	synj1	65	84.840	ENSPKIG00000022603	synj1	89	84.566	Paramormyrops_kingsleyae
ENSORLG00015018077	synj1	90	88.731	ENSPMGG00000016831	synj1	97	88.749	Periophthalmus_magnuspinnatus
ENSORLG00015018077	synj1	77	66.349	ENSPEMG00000018767	Synj1	100	81.871	Peromyscus_maniculatus_bairdii
ENSORLG00015018077	synj1	61	59.152	ENSPMAG00000002887	synj1	76	59.415	Petromyzon_marinus
ENSORLG00015018077	synj1	87	62.930	ENSPCIG00000016372	SYNJ1	82	74.908	Phascolarctos_cinereus
ENSORLG00015018077	synj1	77	87.844	ENSPFOG00000016886	synj1	100	87.019	Poecilia_formosa
ENSORLG00015018077	synj1	96	81.197	ENSPLAG00000017559	synj1	100	84.826	Poecilia_latipinna
ENSORLG00015018077	synj1	96	81.634	ENSPMEG00000007643	synj1	99	81.288	Poecilia_mexicana
ENSORLG00015018077	synj1	96	82.454	ENSPREG00000012412	synj1	99	82.237	Poecilia_reticulata
ENSORLG00015018077	synj1	79	65.021	ENSPPYG00000011365	SYNJ1	78	75.136	Pongo_abelii
ENSORLG00015018077	synj1	50	82.857	ENSPCAG00000009906	SYNJ1	58	82.857	Procavia_capensis
ENSORLG00015018077	synj1	87	75.628	ENSPCOG00000024841	SYNJ1	81	75.434	Propithecus_coquereli
ENSORLG00015018077	synj1	65	71.222	ENSPVAG00000000892	SYNJ1	69	71.131	Pteropus_vampyrus
ENSORLG00015018077	synj1	95	79.414	ENSPNYG00000022989	synj1	100	86.277	Pundamilia_nyererei
ENSORLG00015018077	synj1	65	87.934	ENSPNAG00000021119	synj1	91	87.840	Pygocentrus_nattereri
ENSORLG00015018077	synj1	93	58.934	ENSRNOG00000002051	Synj1	85	75.386	Rattus_norvegicus
ENSORLG00015018077	synj1	95	61.668	ENSRBIG00000034477	SYNJ1	84	75.318	Rhinopithecus_bieti
ENSORLG00015018077	synj1	95	59.503	ENSRROG00000039256	SYNJ1	84	75.408	Rhinopithecus_roxellana
ENSORLG00015018077	synj1	86	64.754	ENSSBOG00000021001	SYNJ1	84	75.340	Saimiri_boliviensis_boliviensis
ENSORLG00015018077	synj1	73	67.240	ENSSHAG00000008538	SYNJ1	70	75.068	Sarcophilus_harrisii
ENSORLG00015018077	synj1	94	75.111	ENSSFOG00015006095	synj1	95	72.566	Scleropages_formosus
ENSORLG00015018077	synj1	95	79.524	ENSSMAG00000018066	synj1	98	84.914	Scophthalmus_maximus
ENSORLG00015018077	synj1	95	83.970	ENSSDUG00000013058	synj1	98	84.735	Seriola_dumerili
ENSORLG00015018077	synj1	95	83.804	ENSSLDG00000021406	synj1	100	88.695	Seriola_lalandi_dorsalis
ENSORLG00015018077	synj1	66	78.585	ENSSARG00000009490	SYNJ1	61	78.585	Sorex_araneus
ENSORLG00015018077	synj1	95	82.544	ENSSPAG00000017029	synj1	99	86.021	Stegastes_partitus
ENSORLG00015018077	synj1	91	83.784	ENSSPAG00000006812	SYNJ1	98	83.873	Stegastes_partitus
ENSORLG00015018077	synj1	93	60.402	ENSSSCG00000012035	SYNJ1	85	74.910	Sus_scrofa
ENSORLG00015018077	synj1	86	64.118	ENSTGUG00000013445	SYNJ1	70	75.204	Taeniopygia_guttata
ENSORLG00015018077	synj1	95	78.832	ENSTRUG00000006907	synj1	97	82.513	Takifugu_rubripes
ENSORLG00015018077	synj1	85	74.313	ENSTNIG00000009940	synj1	83	86.421	Tetraodon_nigroviridis
ENSORLG00015018077	synj1	82	84.416	ENSTBEG00000016298	SYNJ1	61	81.329	Tupaia_belangeri
ENSORLG00015018077	synj1	95	54.414	ENSTTRG00000002222	SYNJ1	71	68.966	Tursiops_truncatus
ENSORLG00015018077	synj1	93	70.316	ENSUAMG00000018606	SYNJ1	98	78.775	Ursus_americanus
ENSORLG00015018077	synj1	93	61.471	ENSUMAG00000018419	SYNJ1	99	78.307	Ursus_maritimus
ENSORLG00015018077	synj1	85	82.857	ENSVPAG00000001241	SYNJ1	59	82.857	Vicugna_pacos
ENSORLG00015018077	synj1	95	58.927	ENSVVUG00000023125	SYNJ1	83	75.545	Vulpes_vulpes
ENSORLG00015018077	synj1	92	58.526	ENSXETG00000009899	synj1	70	73.477	Xenopus_tropicalis
ENSORLG00015018077	synj1	77	87.087	ENSXCOG00000011896	synj1	99	86.429	Xiphophorus_couchianus
ENSORLG00015018077	synj1	96	79.615	ENSXMAG00000017524	synj1	99	79.880	Xiphophorus_maculatus