EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015018251 (Gene tree)
Gene ID: -
Gene Symbol: srp72
Alias: -
Full Name: signal recognition particle 72
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 9109 bases
Position: chr10:5740601-5749709
Accession: ZDB-GENE-030131-5546
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015033030	SRP72	PF08492.12	1.3e-20	1	1
ENSORLP00015017204	SRP72	PF08492.12	1.5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015025654	-	3223	-	ENSORLP00015017204	667 (aa)	-	-
ENSORLT00015034615	-	1854	-	ENSORLP00015033030	617 (aa)	-	-

Gene Model

Click here to download ENSORLG00015018251's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015018251's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015018251	srp72	97	74.501	ENSG00000174780	SRP72	99	75.000	Homo_sapiens
ENSORLG00015018251	srp72	99	76.657	ENSAPOG00000019438	srp72	99	76.391	Acanthochromis_polyacanthus
ENSORLG00015018251	srp72	96	74.806	ENSAMEG00000008469	SRP72	99	75.112	Ailuropoda_melanoleuca
ENSORLG00015018251	srp72	99	87.463	ENSACIG00000000488	srp72	100	86.567	Amphilophus_citrinellus
ENSORLG00015018251	srp72	99	87.706	ENSAOCG00000011256	srp72	100	87.425	Amphiprion_ocellaris
ENSORLG00015018251	srp72	99	88.174	ENSAPEG00000001512	srp72	100	87.275	Amphiprion_percula
ENSORLG00015018251	srp72	92	89.070	ENSATEG00000006781	srp72	99	89.070	Anabas_testudineus
ENSORLG00015018251	srp72	99	75.152	ENSAPLG00000008751	SRP72	98	75.152	Anas_platyrhynchos
ENSORLG00015018251	srp72	97	75.039	ENSACAG00000002381	SRP72	98	73.842	Anolis_carolinensis
ENSORLG00015018251	srp72	96	73.872	ENSANAG00000020836	-	99	75.000	Aotus_nancymaae
ENSORLG00015018251	srp72	99	88.772	ENSACLG00000014617	srp72	100	87.874	Astatotilapia_calliptera
ENSORLG00015018251	srp72	98	80.828	ENSAMXG00000004011	srp72	100	80.510	Astyanax_mexicanus
ENSORLG00015018251	srp72	97	73.733	ENSBTAG00000010593	SRP72	99	74.513	Bos_taurus
ENSORLG00015018251	srp72	97	74.040	ENSCJAG00000017998	SRP72	99	75.000	Callithrix_jacchus
ENSORLG00015018251	srp72	97	74.654	ENSCAFG00000002244	SRP72	99	75.262	Canis_familiaris
ENSORLG00015018251	srp72	97	74.654	ENSCAFG00020027338	SRP72	99	75.505	Canis_lupus_dingo
ENSORLG00015018251	srp72	97	72.086	ENSCHIG00000021465	SRP72	99	72.904	Capra_hircus
ENSORLG00015018251	srp72	97	75.077	ENSTSYG00000010571	-	100	74.298	Carlito_syrichta
ENSORLG00015018251	srp72	80	66.754	ENSCAPG00000016668	SRP72	100	64.202	Cavia_aperea
ENSORLG00015018251	srp72	97	74.040	ENSCPOG00000000218	SRP72	99	74.747	Cavia_porcellus
ENSORLG00015018251	srp72	96	73.832	ENSCCAG00000030683	-	91	75.490	Cebus_capucinus
ENSORLG00015018251	srp72	97	72.308	ENSCCAG00000030830	-	99	72.523	Cebus_capucinus
ENSORLG00015018251	srp72	98	58.806	ENSCATG00000045359	-	96	58.499	Cercocebus_atys
ENSORLG00015018251	srp72	97	74.347	ENSCATG00000008072	SRP72	99	74.747	Cercocebus_atys
ENSORLG00015018251	srp72	97	73.886	ENSCLAG00000003571	SRP72	99	73.163	Chinchilla_lanigera
ENSORLG00015018251	srp72	97	70.706	ENSCSAG00000005079	SRP72	99	69.760	Chlorocebus_sabaeus
ENSORLG00015018251	srp72	89	75.439	ENSCHOG00000013240	SRP72	89	75.439	Choloepus_hoffmanni
ENSORLG00015018251	srp72	96	74.650	ENSCPBG00000015015	SRP72	99	73.353	Chrysemys_picta_bellii
ENSORLG00015018251	srp72	97	41.753	ENSCING00000002417	-	98	41.116	Ciona_intestinalis
ENSORLG00015018251	srp72	94	41.204	ENSCSAVG00000011288	-	98	40.265	Ciona_savignyi
ENSORLG00015018251	srp72	97	74.347	ENSCANG00000041709	SRP72	99	74.747	Colobus_angolensis_palliatus
ENSORLG00015018251	srp72	97	51.645	ENSCANG00000037920	-	96	52.429	Colobus_angolensis_palliatus
ENSORLG00015018251	srp72	99	74.363	ENSCGRG00001013548	Srp72	99	74.813	Cricetulus_griseus_chok1gshd
ENSORLG00015018251	srp72	95	74.606	ENSCGRG00000003013	Srp72	99	75.079	Cricetulus_griseus_crigri
ENSORLG00015018251	srp72	99	85.479	ENSCSEG00000003616	srp72	100	85.180	Cynoglossus_semilaevis
ENSORLG00015018251	srp72	91	90.148	ENSCVAG00000001520	srp72	100	90.148	Cyprinodon_variegatus
ENSORLG00015018251	srp72	85	80.175	ENSDARG00000014139	srp72	99	79.461	Danio_rerio
ENSORLG00015018251	srp72	97	70.597	ENSDNOG00000039012	SRP72	83	69.955	Dasypus_novemcinctus
ENSORLG00015018251	srp72	96	73.953	ENSDORG00000000171	Srp72	99	74.063	Dipodomys_ordii
ENSORLG00015018251	srp72	95	39.408	FBgn0038810	Srp72	98	39.389	Drosophila_melanogaster
ENSORLG00015018251	srp72	96	75.272	ENSETEG00000005191	SRP72	99	75.262	Echinops_telfairi
ENSORLG00015018251	srp72	73	61.789	ENSEBUG00000003696	srp72	97	62.041	Eptatretus_burgeri
ENSORLG00015018251	srp72	97	74.654	ENSEASG00005017747	SRP72	99	74.813	Equus_asinus_asinus
ENSORLG00015018251	srp72	97	74.501	ENSECAG00000006920	SRP72	99	74.663	Equus_caballus
ENSORLG00015018251	srp72	99	81.872	ENSELUG00000022415	srp72	100	81.278	Esox_lucius
ENSORLG00015018251	srp72	97	74.768	ENSFCAG00000027600	SRP72	99	73.763	Felis_catus
ENSORLG00015018251	srp72	96	76.480	ENSFALG00000006713	SRP72	99	76.012	Ficedula_albicollis
ENSORLG00015018251	srp72	97	46.832	ENSFDAG00000009793	-	95	47.312	Fukomys_damarensis
ENSORLG00015018251	srp72	97	73.886	ENSFDAG00000002014	-	99	74.063	Fukomys_damarensis
ENSORLG00015018251	srp72	99	87.892	ENSFHEG00000017652	srp72	92	87.593	Fundulus_heteroclitus
ENSORLG00015018251	srp72	99	78.176	ENSGMOG00000005986	srp72	98	78.506	Gadus_morhua
ENSORLG00015018251	srp72	96	76.131	ENSGALG00000011403	SRP72	99	75.826	Gallus_gallus
ENSORLG00015018251	srp72	99	88.341	ENSGAFG00000017762	srp72	100	87.444	Gambusia_affinis
ENSORLG00015018251	srp72	99	84.454	ENSGACG00000016749	srp72	99	83.707	Gasterosteus_aculeatus
ENSORLG00015018251	srp72	86	75.044	ENSGAGG00000024611	SRP72	98	74.030	Gopherus_agassizii
ENSORLG00015018251	srp72	97	74.194	ENSGGOG00000013234	-	99	74.747	Gorilla_gorilla
ENSORLG00015018251	srp72	99	88.772	ENSHBUG00000020723	srp72	100	87.874	Haplochromis_burtoni
ENSORLG00015018251	srp72	96	57.609	ENSHGLG00000018597	-	99	58.069	Heterocephalus_glaber_female
ENSORLG00015018251	srp72	97	69.278	ENSHGLG00000005029	-	99	68.966	Heterocephalus_glaber_female
ENSORLG00015018251	srp72	51	58.580	ENSHGLG00000003496	-	98	55.942	Heterocephalus_glaber_female
ENSORLG00015018251	srp72	90	66.227	ENSHGLG00000010633	-	99	67.287	Heterocephalus_glaber_female
ENSORLG00015018251	srp72	97	74.040	ENSHGLG00000009791	SRP72	99	74.213	Heterocephalus_glaber_female
ENSORLG00015018251	srp72	86	68.444	ENSHGLG00000003950	-	99	68.444	Heterocephalus_glaber_female
ENSORLG00015018251	srp72	97	69.278	ENSHGLG00100011236	-	99	68.966	Heterocephalus_glaber_male
ENSORLG00015018251	srp72	97	74.040	ENSHGLG00100009021	SRP72	99	74.213	Heterocephalus_glaber_male
ENSORLG00015018251	srp72	86	68.000	ENSHGLG00100017133	-	99	68.000	Heterocephalus_glaber_male
ENSORLG00015018251	srp72	91	56.557	ENSHGLG00100009346	-	99	56.607	Heterocephalus_glaber_male
ENSORLG00015018251	srp72	99	84.835	ENSHCOG00000013760	srp72	100	84.835	Hippocampus_comes
ENSORLG00015018251	srp72	99	80.960	ENSIPUG00000000210	srp72	100	80.960	Ictalurus_punctatus
ENSORLG00015018251	srp72	97	74.501	ENSSTOG00000007305	SRP72	99	74.747	Ictidomys_tridecemlineatus
ENSORLG00015018251	srp72	96	74.844	ENSJJAG00000018324	Srp72	99	75.000	Jaculus_jaculus
ENSORLG00015018251	srp72	98	87.805	ENSKMAG00000003776	srp72	100	86.697	Kryptolebias_marmoratus
ENSORLG00015018251	srp72	98	81.288	ENSLOCG00000002628	srp72	97	81.346	Lepisosteus_oculatus
ENSORLG00015018251	srp72	97	74.347	ENSLAFG00000018307	SRP72	99	74.513	Loxodonta_africana
ENSORLG00015018251	srp72	97	74.347	ENSMFAG00000031065	SRP72	99	74.747	Macaca_fascicularis
ENSORLG00015018251	srp72	98	59.724	ENSMFAG00000037164	-	97	60.155	Macaca_fascicularis
ENSORLG00015018251	srp72	98	74.351	ENSMMUG00000016368	SRP72	99	74.747	Macaca_mulatta
ENSORLG00015018251	srp72	85	68.182	ENSMMUG00000021262	-	96	68.182	Macaca_mulatta
ENSORLG00015018251	srp72	97	74.347	ENSMNEG00000038065	-	99	74.747	Macaca_nemestrina
ENSORLG00015018251	srp72	96	72.628	ENSMLEG00000030140	-	91	73.573	Mandrillus_leucophaeus
ENSORLG00015018251	srp72	99	86.976	ENSMAMG00000014989	srp72	88	86.078	Mastacembelus_armatus
ENSORLG00015018251	srp72	99	88.772	ENSMZEG00005003325	srp72	100	87.874	Maylandia_zebra
ENSORLG00015018251	srp72	95	72.240	ENSMGAG00000008567	SRP72	100	75.161	Meleagris_gallopavo
ENSORLG00015018251	srp72	99	74.355	ENSMAUG00000001237	Srp72	99	74.513	Mesocricetus_auratus
ENSORLG00015018251	srp72	96	73.717	ENSMICG00000008507	-	91	75.367	Microcebus_murinus
ENSORLG00015018251	srp72	99	74.063	ENSMOCG00000020309	Srp72	99	74.513	Microtus_ochrogaster
ENSORLG00015018251	srp72	99	85.629	ENSMMOG00000002627	srp72	100	84.880	Mola_mola
ENSORLG00015018251	srp72	96	70.561	ENSMODG00000020697	SRP72	99	69.715	Monodelphis_domestica
ENSORLG00015018251	srp72	99	85.778	ENSMALG00000003747	srp72	100	84.934	Monopterus_albus
ENSORLG00015018251	srp72	99	74.213	MGP_CAROLIEiJ_G0027323	Srp72	99	74.813	Mus_caroli
ENSORLG00015018251	srp72	99	74.213	ENSMUSG00000036323	Srp72	99	74.813	Mus_musculus
ENSORLG00015018251	srp72	99	74.169	MGP_PahariEiJ_G0017103	Srp72	99	74.513	Mus_pahari
ENSORLG00015018251	srp72	99	74.213	MGP_SPRETEiJ_G0028317	Srp72	99	74.813	Mus_spretus
ENSORLG00015018251	srp72	96	74.806	ENSMPUG00000004828	SRP72	99	75.112	Mustela_putorius_furo
ENSORLG00015018251	srp72	96	74.379	ENSMLUG00000007344	SRP72	99	74.701	Myotis_lucifugus
ENSORLG00015018251	srp72	99	74.367	ENSNGAG00000012595	Srp72	100	74.367	Nannospalax_galili
ENSORLG00015018251	srp72	99	85.030	ENSNBRG00000014492	srp72	100	84.132	Neolamprologus_brichardi
ENSORLG00015018251	srp72	97	69.136	ENSNLEG00000008806	-	99	69.115	Nomascus_leucogenys
ENSORLG00015018251	srp72	98	65.046	ENSMEUG00000005164	SRP72	90	72.505	Notamacropus_eugenii
ENSORLG00015018251	srp72	96	73.906	ENSOPRG00000012521	SRP72	99	72.714	Ochotona_princeps
ENSORLG00015018251	srp72	96	72.473	ENSODEG00000012214	SRP72	100	71.535	Octodon_degus
ENSORLG00015018251	srp72	99	88.772	ENSONIG00000001446	srp72	99	87.874	Oreochromis_niloticus
ENSORLG00015018251	srp72	96	56.878	ENSOANG00000008562	SRP72	97	59.909	Ornithorhynchus_anatinus
ENSORLG00015018251	srp72	97	74.383	ENSOCUG00000012226	SRP72	99	73.313	Oryctolagus_cuniculus
ENSORLG00015018251	srp72	100	99.250	ENSORLG00000020418	srp72	100	99.250	Oryzias_latipes
ENSORLG00015018251	srp72	100	99.250	ENSORLG00020009138	srp72	97	99.250	Oryzias_latipes_hni
ENSORLG00015018251	srp72	100	96.402	ENSOMEG00000022008	srp72	100	96.402	Oryzias_melastigma
ENSORLG00015018251	srp72	97	74.962	ENSOGAG00000003578	SRP72	99	74.213	Otolemur_garnettii
ENSORLG00015018251	srp72	97	73.733	ENSOARG00000004329	SRP72	99	74.513	Ovis_aries
ENSORLG00015018251	srp72	97	74.501	ENSPPAG00000042265	SRP72	99	74.663	Pan_paniscus
ENSORLG00015018251	srp72	98	52.752	ENSPPAG00000011428	-	94	53.231	Pan_paniscus
ENSORLG00015018251	srp72	82	58.364	ENSPPAG00000032490	-	90	58.614	Pan_paniscus
ENSORLG00015018251	srp72	96	74.806	ENSPPRG00000015991	SRP72	100	73.770	Panthera_pardus
ENSORLG00015018251	srp72	96	74.806	ENSPTIG00000018786	SRP72	100	73.770	Panthera_tigris_altaica
ENSORLG00015018251	srp72	80	59.142	ENSPTRG00000043609	-	95	57.018	Pan_troglodytes
ENSORLG00015018251	srp72	98	54.587	ENSPTRG00000048100	-	94	55.077	Pan_troglodytes
ENSORLG00015018251	srp72	97	74.501	ENSPTRG00000048466	-	99	75.000	Pan_troglodytes
ENSORLG00015018251	srp72	94	59.084	ENSPANG00000030230	-	98	59.177	Papio_anubis
ENSORLG00015018251	srp72	97	74.347	ENSPANG00000005495	SRP72	99	74.747	Papio_anubis
ENSORLG00015018251	srp72	93	74.121	ENSPSIG00000003003	SRP72	100	73.209	Pelodiscus_sinensis
ENSORLG00015018251	srp72	99	74.203	ENSPEMG00000012828	-	99	74.213	Peromyscus_maniculatus_bairdii
ENSORLG00015018251	srp72	97	73.529	ENSPCIG00000000732	SRP72	99	72.564	Phascolarctos_cinereus
ENSORLG00015018251	srp72	99	88.490	ENSPFOG00000003480	srp72	100	88.042	Poecilia_formosa
ENSORLG00015018251	srp72	99	88.640	ENSPLAG00000020122	srp72	100	87.743	Poecilia_latipinna
ENSORLG00015018251	srp72	99	88.341	ENSPMEG00000019988	srp72	100	87.892	Poecilia_mexicana
ENSORLG00015018251	srp72	99	88.191	ENSPREG00000006218	srp72	100	87.294	Poecilia_reticulata
ENSORLG00015018251	srp72	97	74.351	ENSPPYG00000014752	-	78	73.323	Pongo_abelii
ENSORLG00015018251	srp72	57	59.686	ENSPPYG00000009152	-	96	59.326	Pongo_abelii
ENSORLG00015018251	srp72	97	72.965	ENSPVAG00000005590	SRP72	99	73.613	Pteropus_vampyrus
ENSORLG00015018251	srp72	99	88.623	ENSPNYG00000001916	srp72	100	87.725	Pundamilia_nyererei
ENSORLG00015018251	srp72	98	81.804	ENSPNAG00000022424	srp72	100	81.709	Pygocentrus_nattereri
ENSORLG00015018251	srp72	99	73.013	ENSRNOG00000002100	LOC108348180	99	73.463	Rattus_norvegicus
ENSORLG00015018251	srp72	97	69.538	ENSRBIG00000042069	SRP72	99	68.468	Rhinopithecus_bieti
ENSORLG00015018251	srp72	99	57.078	ENSRBIG00000029328	-	98	58.103	Rhinopithecus_bieti
ENSORLG00015018251	srp72	97	74.347	ENSRROG00000035704	SRP72	99	74.747	Rhinopithecus_roxellana
ENSORLG00015018251	srp72	93	73.312	ENSSHAG00000000614	SRP72	99	70.045	Sarcophilus_harrisii
ENSORLG00015018251	srp72	99	81.859	ENSSFOG00015002026	srp72	100	81.859	Scleropages_formosus
ENSORLG00015018251	srp72	98	86.170	ENSSMAG00000007639	srp72	98	85.866	Scophthalmus_maximus
ENSORLG00015018251	srp72	99	88.024	ENSSDUG00000007345	srp72	98	87.275	Seriola_dumerili
ENSORLG00015018251	srp72	99	88.174	ENSSLDG00000021819	srp72	98	87.425	Seriola_lalandi_dorsalis
ENSORLG00015018251	srp72	74	73.298	ENSSARG00000005804	SRP72	76	71.608	Sorex_araneus
ENSORLG00015018251	srp72	96	75.234	ENSSPUG00000009740	SRP72	97	75.267	Sphenodon_punctatus
ENSORLG00015018251	srp72	99	89.371	ENSSPAG00000011565	srp72	100	88.623	Stegastes_partitus
ENSORLG00015018251	srp72	99	72.356	ENSSSCG00000008900	SRP72	99	72.564	Sus_scrofa
ENSORLG00015018251	srp72	96	76.361	ENSTGUG00000004767	SRP72	99	75.749	Taeniopygia_guttata
ENSORLG00015018251	srp72	99	85.736	ENSTRUG00000009831	srp72	100	85.736	Takifugu_rubripes
ENSORLG00015018251	srp72	99	86.826	ENSTNIG00000013073	srp72	99	85.928	Tetraodon_nigroviridis
ENSORLG00015018251	srp72	97	53.917	ENSTBEG00000007394	SRP72	99	53.673	Tupaia_belangeri
ENSORLG00015018251	srp72	92	73.948	ENSTTRG00000010945	SRP72	100	74.763	Tursiops_truncatus
ENSORLG00015018251	srp72	57	74.803	ENSUAMG00000001701	SRP72	100	75.000	Ursus_americanus
ENSORLG00015018251	srp72	96	74.650	ENSUMAG00000008151	SRP72	100	74.963	Ursus_maritimus
ENSORLG00015018251	srp72	97	72.965	ENSVPAG00000000458	SRP72	99	73.763	Vicugna_pacos
ENSORLG00015018251	srp72	97	74.501	ENSVVUG00000006020	SRP72	99	75.112	Vulpes_vulpes
ENSORLG00015018251	srp72	95	71.272	ENSXETG00000010205	srp72	100	71.115	Xenopus_tropicalis
ENSORLG00015018251	srp72	99	87.892	ENSXMAG00000018000	srp72	99	86.677	Xiphophorus_maculatus