EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015018254 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 3035 bases
Position: chr11:3546445-3549479
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015033066	zf-C2H2	PF00096.26	2.8e-40	1	6
ENSORLP00015033066	zf-C2H2	PF00096.26	2.8e-40	2	6
ENSORLP00015033066	zf-C2H2	PF00096.26	2.8e-40	3	6
ENSORLP00015033066	zf-C2H2	PF00096.26	2.8e-40	4	6
ENSORLP00015033066	zf-C2H2	PF00096.26	2.8e-40	5	6
ENSORLP00015033066	zf-C2H2	PF00096.26	2.8e-40	6	6
ENSORLP00015033066	zf-met	PF12874.7	7.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015025632	-	978	-	ENSORLP00015033066	325 (aa)	-	-

Gene Model

Click here to download ENSORLG00015018254's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015018254's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015018254	-	88	38.854	ENSORLG00015007986	-	86	36.697
ENSORLG00015018254	-	88	39.446	ENSORLG00015012187	-	90	39.446
ENSORLG00015018254	-	88	45.614	ENSORLG00015016741	-	96	36.426
ENSORLG00015018254	-	94	43.333	ENSORLG00015002548	-	66	43.333
ENSORLG00015018254	-	88	43.939	ENSORLG00015012951	-	80	37.884
ENSORLG00015018254	-	88	43.651	ENSORLG00015012208	-	54	43.651
ENSORLG00015018254	-	88	38.754	ENSORLG00015013962	-	71	38.542
ENSORLG00015018254	-	90	41.818	ENSORLG00015020558	-	69	41.818
ENSORLG00015018254	-	88	48.235	ENSORLG00015000258	-	99	48.235
ENSORLG00015018254	-	89	39.446	ENSORLG00015011917	-	82	39.446
ENSORLG00015018254	-	91	36.923	ENSORLG00015011171	-	66	36.923
ENSORLG00015018254	-	88	44.138	ENSORLG00015012776	-	96	44.138
ENSORLG00015018254	-	88	36.875	ENSORLG00015011509	-	94	38.062
ENSORLG00015018254	-	90	35.764	ENSORLG00015011524	-	64	35.764
ENSORLG00015018254	-	89	49.123	ENSORLG00015012121	-	81	49.123
ENSORLG00015018254	-	88	40.741	ENSORLG00015018360	znf341	50	40.741
ENSORLG00015018254	-	80	40.000	ENSORLG00015000208	-	72	40.000
ENSORLG00015018254	-	94	45.528	ENSORLG00015003796	-	69	45.528
ENSORLG00015018254	-	95	47.253	ENSORLG00015009782	-	89	47.253
ENSORLG00015018254	-	88	47.244	ENSORLG00015016558	-	87	47.244
ENSORLG00015018254	-	88	44.118	ENSORLG00015010765	-	68	44.118
ENSORLG00015018254	-	89	41.333	ENSORLG00015019165	scrt1b	55	41.333
ENSORLG00015018254	-	93	36.923	ENSORLG00015019986	-	57	36.923
ENSORLG00015018254	-	88	43.333	ENSORLG00015011401	-	96	41.818
ENSORLG00015018254	-	88	32.143	ENSORLG00015009575	ZNF384	54	40.441
ENSORLG00015018254	-	88	34.862	ENSORLG00015009684	znf319b	84	34.862
ENSORLG00015018254	-	93	46.667	ENSORLG00015011871	-	99	40.741
ENSORLG00015018254	-	88	36.697	ENSORLG00015007200	ZNF319	90	36.697
ENSORLG00015018254	-	88	41.045	ENSORLG00015017142	gfi1b	50	41.045
ENSORLG00015018254	-	91	39.815	ENSORLG00015009640	-	99	39.286
ENSORLG00015018254	-	88	45.763	ENSORLG00015012840	-	51	45.588
ENSORLG00015018254	-	88	44.578	ENSORLG00015016085	-	95	37.024
ENSORLG00015018254	-	88	43.038	ENSORLG00015012800	-	67	35.632
ENSORLG00015018254	-	96	37.162	ENSORLG00015011730	-	98	38.662
ENSORLG00015018254	-	88	40.187	ENSORLG00015008609	snai2	55	40.187
ENSORLG00015018254	-	88	39.404	ENSORLG00015016420	-	84	38.636
ENSORLG00015018254	-	88	50.000	ENSORLG00015012627	-	70	50.000
ENSORLG00015018254	-	92	40.984	ENSORLG00015013417	-	98	40.984
ENSORLG00015018254	-	92	37.333	ENSORLG00015007973	-	71	34.483
ENSORLG00015018254	-	92	41.071	ENSORLG00015007146	-	72	41.071
ENSORLG00015018254	-	90	47.458	ENSORLG00015008496	-	96	42.073
ENSORLG00015018254	-	90	47.619	ENSORLG00015012138	-	50	47.619
ENSORLG00015018254	-	86	48.193	ENSORLG00015016392	-	97	48.193
ENSORLG00015018254	-	94	40.377	ENSORLG00015010892	-	85	45.763
ENSORLG00015018254	-	99	42.857	ENSORLG00015008733	znf646	91	33.945
ENSORLG00015018254	-	88	43.478	ENSORLG00015006070	GFI1	51	43.478
ENSORLG00015018254	-	88	49.438	ENSORLG00015013448	-	99	49.438
ENSORLG00015018254	-	91	32.432	ENSORLG00015013760	prdm5	74	34.375
ENSORLG00015018254	-	90	41.772	ENSORLG00015018258	-	85	41.772
ENSORLG00015018254	-	89	35.514	ENSORLG00015002568	zbtb48	59	35.514
ENSORLG00015018254	-	88	45.455	ENSORLG00015013093	-	54	45.455
ENSORLG00015018254	-	88	36.162	ENSORLG00015010816	-	86	39.706
ENSORLG00015018254	-	88	34.483	ENSORLG00015007853	zbtb41	65	34.483
ENSORLG00015018254	-	88	46.809	ENSORLG00015007128	-	100	37.273
ENSORLG00015018254	-	88	39.100	ENSORLG00015012062	-	76	39.100
ENSORLG00015018254	-	89	55.172	ENSORLG00015015776	-	98	38.754
ENSORLG00015018254	-	89	39.062	ENSORLG00015005877	sall3b	73	39.062
ENSORLG00015018254	-	89	35.377	ENSORLG00015010834	-	82	35.377
ENSORLG00015018254	-	89	37.716	ENSORLG00015014015	-	90	37.716
ENSORLG00015018254	-	93	43.750	ENSORLG00015018340	znf236	68	40.741
ENSORLG00015018254	-	88	52.294	ENSORLG00015009384	-	94	52.294
ENSORLG00015018254	-	88	48.276	ENSORLG00015011236	-	57	48.276
ENSORLG00015018254	-	88	38.889	ENSORLG00015013102	-	92	36.709
ENSORLG00015018254	-	88	37.063	ENSORLG00015012904	-	78	37.063
ENSORLG00015018254	-	88	42.453	ENSORLG00015010853	-	80	42.453
ENSORLG00015018254	-	88	39.200	ENSORLG00015007132	-	65	39.200
ENSORLG00015018254	-	92	43.089	ENSORLG00015000916	-	96	43.089
ENSORLG00015018254	-	92	42.045	ENSORLG00015018099	-	69	42.045
ENSORLG00015018254	-	88	40.441	ENSORLG00015007168	-	94	48.571
ENSORLG00015018254	-	88	35.780	ENSORLG00015007164	-	88	39.535
ENSORLG00015018254	-	91	39.286	ENSORLG00015021191	-	76	39.286
ENSORLG00015018254	-	94	39.423	ENSORLG00015018781	zgc:66448	85	32.061
ENSORLG00015018254	-	90	37.500	ENSORLG00015014797	-	55	37.500
ENSORLG00015018254	-	92	45.378	ENSORLG00015011153	-	92	41.497
ENSORLG00015018254	-	88	41.566	ENSORLG00015014006	-	83	41.566
ENSORLG00015018254	-	88	49.206	ENSORLG00015016704	-	69	49.206
ENSORLG00015018254	-	88	42.353	ENSORLG00015008013	-	80	42.353
ENSORLG00015018254	-	88	41.026	ENSORLG00015012599	-	58	41.026
ENSORLG00015018254	-	96	35.417	ENSORLG00015012339	-	94	35.417
ENSORLG00015018254	-	88	42.105	ENSORLG00015014916	-	91	42.105
ENSORLG00015018254	-	88	42.308	ENSORLG00015010933	-	71	42.308
ENSORLG00015018254	-	82	38.614	ENSORLG00015019424	-	69	38.462
ENSORLG00015018254	-	90	35.754	ENSORLG00015019853	-	62	35.754
ENSORLG00015018254	-	88	38.462	ENSORLG00015017097	-	64	37.768
ENSORLG00015018254	-	90	35.424	ENSORLG00015010783	-	76	39.189
ENSORLG00015018254	-	90	45.217	ENSORLG00015017255	-	54	45.217
ENSORLG00015018254	-	88	38.462	ENSORLG00015012892	-	89	37.716
ENSORLG00015018254	-	90	48.571	ENSORLG00015014823	-	93	39.792
ENSORLG00015018254	-	90	50.000	ENSORLG00015014056	-	95	50.000
ENSORLG00015018254	-	99	43.902	ENSORLG00015013302	-	84	43.902
ENSORLG00015018254	-	90	33.728	ENSORLG00015020022	-	78	39.216
ENSORLG00015018254	-	88	37.333	ENSORLG00015005524	scrt2	51	37.333
ENSORLG00015018254	-	94	43.590	ENSORLG00015007385	e4f1	61	43.590
ENSORLG00015018254	-	86	43.312	ENSORLG00015012084	-	67	37.500
ENSORLG00015018254	-	88	45.349	ENSORLG00015007920	-	97	48.837
ENSORLG00015018254	-	88	41.176	ENSORLG00015012826	-	59	41.176
ENSORLG00015018254	-	89	43.333	ENSORLG00015011758	-	70	43.333
ENSORLG00015018254	-	91	41.176	ENSORLG00015022006	-	78	41.176
ENSORLG00015018254	-	90	47.706	ENSORLG00015013935	-	78	47.706
ENSORLG00015018254	-	89	36.364	ENSORLG00015010720	-	69	36.364
ENSORLG00015018254	-	93	36.879	ENSORLG00015012052	-	93	36.879
ENSORLG00015018254	-	94	34.940	ENSORLG00015019124	-	82	35.274
ENSORLG00015018254	-	90	39.759	ENSORLG00015007742	-	89	37.736
ENSORLG00015018254	-	88	48.544	ENSORLG00015017539	-	69	48.544
ENSORLG00015018254	-	88	44.762	ENSORLG00015012158	-	68	33.333
ENSORLG00015018254	-	88	39.744	ENSORLG00015013160	-	98	39.744

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015018254	-	89	50.943	ENSACIG00000017166	-	66	50.943	Amphilophus_citrinellus
ENSORLG00015018254	-	87	40.179	ENSAOCG00000018579	-	70	40.179	Amphiprion_ocellaris
ENSORLG00015018254	-	90	36.559	ENSAPEG00000019755	-	98	36.559	Amphiprion_percula
ENSORLG00015018254	-	90	33.613	ENSAPEG00000007889	-	72	31.646	Amphiprion_percula
ENSORLG00015018254	-	90	33.083	WBGene00021374	Y37E11B.1	95	32.743	Caenorhabditis_elegans
ENSORLG00015018254	-	89	36.250	ENSCING00000000529	zf(btb/c2h2)	54	36.250	Ciona_intestinalis
ENSORLG00015018254	-	89	30.693	ENSCING00000004861	zf(c2h2)-12	74	31.034	Ciona_intestinalis
ENSORLG00015018254	-	87	42.000	ENSCING00000003384	-	93	31.250	Ciona_intestinalis
ENSORLG00015018254	-	89	37.931	ENSCING00000005713	-	69	37.931	Ciona_intestinalis
ENSORLG00015018254	-	94	35.016	ENSCSAVG00000009574	-	100	35.880	Ciona_savignyi
ENSORLG00015018254	-	87	40.952	ENSCSAVG00000003895	-	99	40.952	Ciona_savignyi
ENSORLG00015018254	-	94	34.868	ENSCSAVG00000006729	-	70	35.417	Ciona_savignyi
ENSORLG00015018254	-	99	38.318	ENSCSEG00000005491	-	83	38.318	Cynoglossus_semilaevis
ENSORLG00015018254	-	89	43.056	ENSCVAG00000019574	-	83	43.056	Cyprinodon_variegatus
ENSORLG00015018254	-	79	43.077	ENSCVAG00000002502	-	100	38.384	Cyprinodon_variegatus
ENSORLG00015018254	-	90	43.333	ENSCVAG00000002295	-	77	43.333	Cyprinodon_variegatus
ENSORLG00015018254	-	96	33.217	ENSCVAG00000016098	-	98	38.272	Cyprinodon_variegatus
ENSORLG00015018254	-	86	32.215	FBgn0030012	CG18262	63	30.263	Drosophila_melanogaster
ENSORLG00015018254	-	91	36.813	FBgn0033934	CG17385	79	36.813	Drosophila_melanogaster
ENSORLG00015018254	-	88	34.211	FBgn0037722	CG8319	61	34.211	Drosophila_melanogaster
ENSORLG00015018254	-	89	41.509	FBgn0028895	CG17328	53	41.509	Drosophila_melanogaster
ENSORLG00015018254	-	88	45.946	ENSEBUG00000008392	-	75	37.847	Eptatretus_burgeri
ENSORLG00015018254	-	89	40.828	ENSEBUG00000015522	-	69	40.828	Eptatretus_burgeri
ENSORLG00015018254	-	92	37.153	ENSEBUG00000000735	-	100	37.153	Eptatretus_burgeri
ENSORLG00015018254	-	90	38.542	ENSEBUG00000004841	-	81	38.542	Eptatretus_burgeri
ENSORLG00015018254	-	98	32.673	ENSELUG00000020794	-	65	32.673	Esox_lucius
ENSORLG00015018254	-	97	31.081	ENSELUG00000010454	-	63	31.081	Esox_lucius
ENSORLG00015018254	-	93	33.788	ENSFHEG00000007344	-	53	33.788	Fundulus_heteroclitus
ENSORLG00015018254	-	92	35.915	ENSFHEG00000012990	-	92	35.915	Fundulus_heteroclitus
ENSORLG00015018254	-	90	34.014	ENSFHEG00000020889	-	76	34.014	Fundulus_heteroclitus
ENSORLG00015018254	-	90	38.938	ENSFHEG00000013644	-	78	40.070	Fundulus_heteroclitus
ENSORLG00015018254	-	98	36.449	ENSFHEG00000003596	-	73	36.449	Fundulus_heteroclitus
ENSORLG00015018254	-	92	36.000	ENSGACG00000018415	-	98	36.000	Gasterosteus_aculeatus
ENSORLG00015018254	-	94	31.557	ENSHCOG00000008181	-	68	31.313	Hippocampus_comes
ENSORLG00015018254	-	94	37.059	ENSHCOG00000001313	-	58	36.000	Hippocampus_comes
ENSORLG00015018254	-	88	45.000	ENSHCOG00000017437	-	72	40.650	Hippocampus_comes
ENSORLG00015018254	-	94	34.483	ENSHCOG00000014881	-	69	34.483	Hippocampus_comes
ENSORLG00015018254	-	93	39.080	ENSIPUG00000013526	-	72	39.080	Ictalurus_punctatus
ENSORLG00015018254	-	92	39.024	ENSKMAG00000012909	-	87	33.712	Kryptolebias_marmoratus
ENSORLG00015018254	-	92	35.430	ENSKMAG00000007658	-	89	35.430	Kryptolebias_marmoratus
ENSORLG00015018254	-	86	40.909	ENSLBEG00000026573	-	59	40.909	Labrus_bergylta
ENSORLG00015018254	-	79	37.500	ENSMMOG00000001961	-	95	37.500	Mola_mola
ENSORLG00015018254	-	83	31.250	ENSMALG00000013521	-	60	31.250	Monopterus_albus
ENSORLG00015018254	-	90	52.381	ENSONIG00000007812	-	99	38.953	Oreochromis_niloticus
ENSORLG00015018254	-	90	37.405	ENSONIG00000003471	-	100	39.796	Oreochromis_niloticus
ENSORLG00015018254	-	91	35.714	ENSONIG00000003224	-	93	35.714	Oreochromis_niloticus
ENSORLG00015018254	-	91	34.589	ENSONIG00000016416	-	96	36.149	Oreochromis_niloticus
ENSORLG00015018254	-	87	41.558	ENSONIG00000009894	-	100	41.558	Oreochromis_niloticus
ENSORLG00015018254	-	90	35.455	ENSOMEG00000017673	-	67	35.455	Oryzias_melastigma
ENSORLG00015018254	-	93	38.532	ENSPMGG00000000243	-	77	38.532	Periophthalmus_magnuspinnatus
ENSORLG00015018254	-	94	44.000	ENSPMGG00000000489	-	91	44.000	Periophthalmus_magnuspinnatus
ENSORLG00015018254	-	93	33.333	ENSPMGG00000019842	-	79	33.333	Periophthalmus_magnuspinnatus
ENSORLG00015018254	-	90	44.231	ENSPMGG00000000218	-	60	31.304	Periophthalmus_magnuspinnatus
ENSORLG00015018254	-	91	50.000	ENSPMGG00000000458	-	95	44.203	Periophthalmus_magnuspinnatus
ENSORLG00015018254	-	98	32.584	ENSPMGG00000013602	-	77	32.584	Periophthalmus_magnuspinnatus
ENSORLG00015018254	-	95	45.902	ENSPMGG00000022524	-	96	45.902	Periophthalmus_magnuspinnatus
ENSORLG00015018254	-	88	31.544	ENSPMGG00000012289	-	72	31.544	Periophthalmus_magnuspinnatus
ENSORLG00015018254	-	94	31.833	ENSPMGG00000010563	-	75	31.833	Periophthalmus_magnuspinnatus
ENSORLG00015018254	-	90	36.093	ENSPMGG00000010664	-	91	33.439	Periophthalmus_magnuspinnatus
ENSORLG00015018254	-	90	38.596	ENSPMAG00000007983	-	97	38.596	Petromyzon_marinus
ENSORLG00015018254	-	93	37.410	ENSPFOG00000020691	-	81	37.500	Poecilia_formosa
ENSORLG00015018254	-	92	40.136	ENSPFOG00000002879	-	100	40.136	Poecilia_formosa
ENSORLG00015018254	-	90	44.444	ENSPLAG00000006174	-	71	44.444	Poecilia_latipinna
ENSORLG00015018254	-	89	52.830	ENSPLAG00000011254	-	57	52.830	Poecilia_latipinna
ENSORLG00015018254	-	94	42.857	ENSPMEG00000021927	-	52	42.857	Poecilia_mexicana
ENSORLG00015018254	-	90	37.805	ENSPMEG00000019229	-	67	37.805	Poecilia_mexicana
ENSORLG00015018254	-	88	40.000	ENSPMEG00000022676	-	100	40.000	Poecilia_mexicana
ENSORLG00015018254	-	89	52.830	ENSPMEG00000007503	-	59	43.066	Poecilia_mexicana
ENSORLG00015018254	-	96	34.682	ENSPREG00000016204	-	66	35.294	Poecilia_reticulata
ENSORLG00015018254	-	90	37.805	ENSPREG00000007146	-	67	37.805	Poecilia_reticulata
ENSORLG00015018254	-	90	52.830	ENSPREG00000015352	-	61	52.830	Poecilia_reticulata
ENSORLG00015018254	-	98	31.034	ENSPNAG00000025211	-	79	31.034	Pygocentrus_nattereri
ENSORLG00015018254	-	92	48.333	ENSSDUG00000000946	-	89	48.333	Seriola_dumerili
ENSORLG00015018254	-	89	50.943	ENSSLDG00000002515	-	72	50.943	Seriola_lalandi_dorsalis
ENSORLG00015018254	-	87	45.333	ENSSLDG00000000464	-	54	45.333	Seriola_lalandi_dorsalis
ENSORLG00015018254	-	90	37.805	ENSSPAG00000009405	-	55	37.805	Stegastes_partitus
ENSORLG00015018254	-	89	32.886	ENSTNIG00000008154	-	99	32.886	Tetraodon_nigroviridis
ENSORLG00015018254	-	89	37.179	ENSXCOG00000005697	-	98	37.179	Xiphophorus_couchianus
ENSORLG00015018254	-	89	52.830	ENSXMAG00000022242	-	73	52.830	Xiphophorus_maculatus