EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015018270 (Gene tree)
Gene ID: -
Gene Symbol: lrpprc
Alias: -
Full Name: leucine-rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 51383 bases
Position: chr15:16288536-16339918
Accession: ZDB-GENE-030131-7887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015017076	PPR	PF01535.20	2.9e-28	1	4
ENSORLP00015017076	PPR	PF01535.20	2.9e-28	2	4
ENSORLP00015017076	PPR	PF01535.20	2.9e-28	3	4
ENSORLP00015017076	PPR	PF01535.20	2.9e-28	4	4
ENSORLP00015017103	PPR	PF01535.20	1.1e-27	1	4
ENSORLP00015017103	PPR	PF01535.20	1.1e-27	2	4
ENSORLP00015017103	PPR	PF01535.20	1.1e-27	3	4
ENSORLP00015017103	PPR	PF01535.20	1.1e-27	4	4
ENSORLP00015017062	PPR	PF01535.20	1.8e-13	1	2
ENSORLP00015017062	PPR	PF01535.20	1.8e-13	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015025444	-	3825	-	ENSORLP00015017076	1274 (aa)	-	-
ENSORLT00015025416	-	1533	-	ENSORLP00015017062	510 (aa)	-	-
ENSORLT00015025459	-	4095	-	ENSORLP00015017103	1364 (aa)	-	-

Gene Model

Click here to download ENSORLG00015018270's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015018270's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015018270	lrpprc	100	70.238	ENSAPOG00000016610	lrpprc	100	70.168	Acanthochromis_polyacanthus
ENSORLG00015018270	lrpprc	86	58.503	ENSAMEG00000005852	LRPPRC	97	49.178	Ailuropoda_melanoleuca
ENSORLG00015018270	lrpprc	92	78.373	ENSACIG00000009604	lrpprc	99	69.834	Amphilophus_citrinellus
ENSORLG00015018270	lrpprc	100	76.803	ENSAOCG00000005886	lrpprc	96	76.803	Amphiprion_ocellaris
ENSORLG00015018270	lrpprc	95	76.721	ENSAPEG00000002937	lrpprc	100	69.939	Amphiprion_percula
ENSORLG00015018270	lrpprc	92	76.858	ENSATEG00000010555	lrpprc	95	77.727	Anabas_testudineus
ENSORLG00015018270	lrpprc	96	61.435	ENSACAG00000029278	LRPPRC	99	51.408	Anolis_carolinensis
ENSORLG00015018270	lrpprc	99	55.754	ENSANAG00000027440	LRPPRC	97	54.784	Aotus_nancymaae
ENSORLG00015018270	lrpprc	87	80.717	ENSACLG00000023712	lrpprc	92	78.936	Astatotilapia_calliptera
ENSORLG00015018270	lrpprc	93	59.639	ENSAMXG00000004245	-	96	59.459	Astyanax_mexicanus
ENSORLG00015018270	lrpprc	96	59.152	ENSCJAG00000000794	LRPPRC	97	54.221	Callithrix_jacchus
ENSORLG00015018270	lrpprc	96	58.837	ENSCHIG00000020173	LRPPRC	99	50.141	Capra_hircus
ENSORLG00015018270	lrpprc	96	42.668	ENSCAPG00000013631	LRPPRC	98	42.668	Cavia_aperea
ENSORLG00015018270	lrpprc	86	50.135	ENSCPOG00000000204	LRPPRC	97	50.135	Cavia_porcellus
ENSORLG00015018270	lrpprc	99	55.754	ENSCCAG00000031900	LRPPRC	99	55.819	Cebus_capucinus
ENSORLG00015018270	lrpprc	99	47.986	ENSCATG00000014187	LRPPRC	98	54.034	Cercocebus_atys
ENSORLG00015018270	lrpprc	98	52.485	ENSCLAG00000005203	LRPPRC	99	47.486	Chinchilla_lanigera
ENSORLG00015018270	lrpprc	86	58.864	ENSCSAG00000013233	LRPPRC	96	49.926	Chlorocebus_sabaeus
ENSORLG00015018270	lrpprc	93	54.930	ENSCHOG00000003631	LRPPRC	84	48.045	Choloepus_hoffmanni
ENSORLG00015018270	lrpprc	96	49.156	ENSCANG00000034961	LRPPRC	99	69.298	Colobus_angolensis_palliatus
ENSORLG00015018270	lrpprc	99	50.628	ENSCGRG00001016261	Lrpprc	97	51.167	Cricetulus_griseus_chok1gshd
ENSORLG00015018270	lrpprc	99	50.628	ENSCGRG00000004072	Lrpprc	97	51.167	Cricetulus_griseus_crigri
ENSORLG00015018270	lrpprc	92	60.208	ENSCSEG00000003850	lrpprc	97	60.000	Cynoglossus_semilaevis
ENSORLG00015018270	lrpprc	100	72.842	ENSCVAG00000012967	lrpprc	100	72.632	Cyprinodon_variegatus
ENSORLG00015018270	lrpprc	99	55.052	ENSDARG00000043970	lrpprc	98	55.052	Danio_rerio
ENSORLG00015018270	lrpprc	91	47.872	ENSDNOG00000032336	-	96	40.656	Dasypus_novemcinctus
ENSORLG00015018270	lrpprc	98	53.755	ENSDNOG00000012594	-	99	48.829	Dasypus_novemcinctus
ENSORLG00015018270	lrpprc	95	57.883	ENSDORG00000012233	Lrpprc	99	49.153	Dipodomys_ordii
ENSORLG00015018270	lrpprc	99	55.666	ENSETEG00000006657	LRPPRC	94	55.666	Echinops_telfairi
ENSORLG00015018270	lrpprc	84	51.786	ENSEBUG00000015884	-	97	51.786	Eptatretus_burgeri
ENSORLG00015018270	lrpprc	85	53.318	ENSEEUG00000012340	LRPPRC	83	53.318	Erinaceus_europaeus
ENSORLG00015018270	lrpprc	97	59.193	ENSELUG00000012803	lrpprc	99	59.193	Esox_lucius
ENSORLG00015018270	lrpprc	99	55.865	ENSFCAG00000013468	LRPPRC	94	55.865	Felis_catus
ENSORLG00015018270	lrpprc	95	58.716	ENSFALG00000012738	LRPPRC	92	58.716	Ficedula_albicollis
ENSORLG00015018270	lrpprc	98	52.104	ENSFDAG00000015328	LRPPRC	99	46.396	Fukomys_damarensis
ENSORLG00015018270	lrpprc	100	69.684	ENSFHEG00000019604	lrpprc	100	69.544	Fundulus_heteroclitus
ENSORLG00015018270	lrpprc	92	70.168	ENSGMOG00000008337	lrpprc	99	60.600	Gadus_morhua
ENSORLG00015018270	lrpprc	92	76.143	ENSGAFG00000001455	lrpprc	99	69.024	Gambusia_affinis
ENSORLG00015018270	lrpprc	92	76.892	ENSGACG00000010679	lrpprc	94	76.353	Gasterosteus_aculeatus
ENSORLG00015018270	lrpprc	79	60.794	ENSGGOG00000041704	-	99	60.794	Gorilla_gorilla
ENSORLG00015018270	lrpprc	100	71.278	ENSHBUG00000000393	lrpprc	98	71.208	Haplochromis_burtoni
ENSORLG00015018270	lrpprc	98	52.183	ENSHGLG00000006123	LRPPRC	99	47.298	Heterocephalus_glaber_female
ENSORLG00015018270	lrpprc	61	46.675	ENSHGLG00100005960	-	97	46.675	Heterocephalus_glaber_male
ENSORLG00015018270	lrpprc	96	71.845	ENSHCOG00000002107	lrpprc	94	71.845	Hippocampus_comes
ENSORLG00015018270	lrpprc	99	64.844	ENSIPUG00000009406	lrpprc	93	64.844	Ictalurus_punctatus
ENSORLG00015018270	lrpprc	95	57.883	ENSSTOG00000011185	LRPPRC	94	54.728	Ictidomys_tridecemlineatus
ENSORLG00015018270	lrpprc	99	51.543	ENSJJAG00000020475	Lrpprc	97	51.724	Jaculus_jaculus
ENSORLG00015018270	lrpprc	85	76.782	ENSKMAG00000003287	lrpprc	85	62.145	Kryptolebias_marmoratus
ENSORLG00015018270	lrpprc	94	74.694	ENSLBEG00000023225	lrpprc	96	74.898	Labrus_bergylta
ENSORLG00015018270	lrpprc	99	59.574	ENSLACG00000014030	LRPPRC	100	54.571	Latimeria_chalumnae
ENSORLG00015018270	lrpprc	97	63.740	ENSLOCG00000016390	lrpprc	97	57.947	Lepisosteus_oculatus
ENSORLG00015018270	lrpprc	99	53.175	ENSLAFG00000008614	LRPPRC	94	52.976	Loxodonta_africana
ENSORLG00015018270	lrpprc	96	58.837	ENSMFAG00000041560	LRPPRC	99	55.238	Macaca_fascicularis
ENSORLG00015018270	lrpprc	86	58.864	ENSMMUG00000019841	LRPPRC	99	55.238	Macaca_mulatta
ENSORLG00015018270	lrpprc	96	58.837	ENSMNEG00000031613	LRPPRC	98	53.846	Macaca_nemestrina
ENSORLG00015018270	lrpprc	92	76.289	ENSMAMG00000021835	lrpprc	89	75.246	Mastacembelus_armatus
ENSORLG00015018270	lrpprc	99	76.459	ENSMZEG00005027379	lrpprc	94	76.459	Maylandia_zebra
ENSORLG00015018270	lrpprc	95	59.184	ENSMAUG00000012118	Lrpprc	91	59.184	Mesocricetus_auratus
ENSORLG00015018270	lrpprc	99	50.896	ENSMICG00000010486	LRPPRC	98	53.846	Microcebus_murinus
ENSORLG00015018270	lrpprc	98	54.326	ENSMOCG00000006048	Lrpprc	94	54.326	Microtus_ochrogaster
ENSORLG00015018270	lrpprc	93	77.909	ENSMMOG00000007830	lrpprc	95	77.909	Mola_mola
ENSORLG00015018270	lrpprc	96	58.575	ENSMODG00000000648	LRPPRC	99	49.336	Monodelphis_domestica
ENSORLG00015018270	lrpprc	94	71.540	ENSMALG00000001271	lrpprc	99	65.520	Monopterus_albus
ENSORLG00015018270	lrpprc	93	55.734	ENSMPUG00000011800	LRPPRC	99	50.041	Mustela_putorius_furo
ENSORLG00015018270	lrpprc	96	59.193	ENSMLUG00000010575	LRPPRC	96	59.193	Myotis_lucifugus
ENSORLG00015018270	lrpprc	98	53.815	ENSNGAG00000013069	Lrpprc	94	53.815	Nannospalax_galili
ENSORLG00015018270	lrpprc	86	81.879	ENSNBRG00000013202	lrpprc	92	81.879	Neolamprologus_brichardi
ENSORLG00015018270	lrpprc	93	55.242	ENSNLEG00000016782	LRPPRC	99	53.636	Nomascus_leucogenys
ENSORLG00015018270	lrpprc	86	56.889	ENSOPRG00000016774	LRPPRC	82	56.889	Ochotona_princeps
ENSORLG00015018270	lrpprc	95	49.004	ENSODEG00000011211	LRPPRC	99	48.000	Octodon_degus
ENSORLG00015018270	lrpprc	100	71.359	ENSONIG00000000917	lrpprc	100	70.459	Oreochromis_niloticus
ENSORLG00015018270	lrpprc	53	49.430	ENSOANG00000014670	-	100	44.118	Ornithorhynchus_anatinus
ENSORLG00015018270	lrpprc	99	51.250	ENSOCUG00000015046	LRPPRC	93	51.250	Oryctolagus_cuniculus
ENSORLG00015018270	lrpprc	100	89.327	ENSORLG00000004605	lrpprc	99	88.754	Oryzias_latipes
ENSORLG00015018270	lrpprc	91	87.855	ENSORLG00020012536	lrpprc	99	87.420	Oryzias_latipes_hni
ENSORLG00015018270	lrpprc	98	83.984	ENSOMEG00000011863	-	99	87.103	Oryzias_melastigma
ENSORLG00015018270	lrpprc	95	49.745	ENSOGAG00000012798	LRPPRC	99	49.190	Otolemur_garnettii
ENSORLG00015018270	lrpprc	96	58.837	ENSOARG00000006522	LRPPRC	99	50.106	Ovis_aries
ENSORLG00015018270	lrpprc	99	54.420	ENSPPAG00000040876	LRPPRC	98	54.120	Pan_paniscus
ENSORLG00015018270	lrpprc	99	55.865	ENSPPRG00000006578	LRPPRC	99	49.085	Panthera_pardus
ENSORLG00015018270	lrpprc	96	59.508	ENSPTIG00000000933	LRPPRC	90	59.508	Panthera_tigris_altaica
ENSORLG00015018270	lrpprc	99	55.070	ENSPTRG00000011880	LRPPRC	98	54.221	Pan_troglodytes
ENSORLG00015018270	lrpprc	99	48.307	ENSPANG00000020731	LRPPRC	98	53.659	Papio_anubis
ENSORLG00015018270	lrpprc	93	56.400	ENSPKIG00000022232	lrpprc	98	56.496	Paramormyrops_kingsleyae
ENSORLG00015018270	lrpprc	61	50.673	ENSPSIG00000006830	-	98	49.654	Pelodiscus_sinensis
ENSORLG00015018270	lrpprc	86	73.434	ENSPMGG00000013171	-	95	74.043	Periophthalmus_magnuspinnatus
ENSORLG00015018270	lrpprc	66	60.321	ENSPMGG00000016597	lrpprc	97	60.436	Periophthalmus_magnuspinnatus
ENSORLG00015018270	lrpprc	80	58.049	ENSPMAG00000002147	lrpprc	99	44.663	Petromyzon_marinus
ENSORLG00015018270	lrpprc	99	67.728	ENSPFOG00000011227	lrpprc	99	67.941	Poecilia_formosa
ENSORLG00015018270	lrpprc	99	67.445	ENSPLAG00000004018	lrpprc	99	67.657	Poecilia_latipinna
ENSORLG00015018270	lrpprc	99	67.657	ENSPMEG00000016425	lrpprc	99	67.870	Poecilia_mexicana
ENSORLG00015018270	lrpprc	99	67.304	ENSPREG00000003662	lrpprc	99	67.516	Poecilia_reticulata
ENSORLG00015018270	lrpprc	60	46.724	ENSPPYG00000029532	-	100	46.724	Pongo_abelii
ENSORLG00015018270	lrpprc	93	56.485	ENSPCAG00000001430	LRPPRC	80	54.221	Procavia_capensis
ENSORLG00015018270	lrpprc	95	58.824	ENSPVAG00000002007	LRPPRC	90	58.824	Pteropus_vampyrus
ENSORLG00015018270	lrpprc	94	75.506	ENSPNYG00000000756	lrpprc	98	74.141	Pundamilia_nyererei
ENSORLG00015018270	lrpprc	98	66.214	ENSPNAG00000002895	lrpprc	94	66.214	Pygocentrus_nattereri
ENSORLG00015018270	lrpprc	93	52.525	ENSRNOG00000005877	Lrpprc	96	49.108	Rattus_norvegicus
ENSORLG00015018270	lrpprc	96	58.705	ENSRBIG00000031552	LRPPRC	90	58.705	Rhinopithecus_bieti
ENSORLG00015018270	lrpprc	86	59.091	ENSRROG00000042793	-	98	53.759	Rhinopithecus_roxellana
ENSORLG00015018270	lrpprc	99	55.467	ENSSBOG00000011807	LRPPRC	98	53.933	Saimiri_boliviensis_boliviensis
ENSORLG00015018270	lrpprc	87	57.616	ENSSHAG00000018725	LRPPRC	99	58.520	Sarcophilus_harrisii
ENSORLG00015018270	lrpprc	99	57.505	ENSSFOG00015001042	lrpprc	99	52.111	Scleropages_formosus
ENSORLG00015018270	lrpprc	97	66.469	ENSSMAG00000016811	-	99	68.228	Scophthalmus_maximus
ENSORLG00015018270	lrpprc	100	66.526	ENSSDUG00000019062	lrpprc	99	66.526	Seriola_dumerili
ENSORLG00015018270	lrpprc	100	58.916	ENSSLDG00000023028	lrpprc	100	59.190	Seriola_lalandi_dorsalis
ENSORLG00015018270	lrpprc	83	59.843	ENSSARG00000000426	LRPPRC	88	59.843	Sorex_araneus
ENSORLG00015018270	lrpprc	100	71.150	ENSSPAG00000000162	lrpprc	98	71.150	Stegastes_partitus
ENSORLG00015018270	lrpprc	99	56.238	ENSSSCG00000008452	LRPPRC	94	56.238	Sus_scrofa
ENSORLG00015018270	lrpprc	94	60.190	ENSTGUG00000003759	LRPPRC	94	60.190	Taeniopygia_guttata
ENSORLG00015018270	lrpprc	93	72.656	ENSTRUG00000008409	lrpprc	96	66.328	Takifugu_rubripes
ENSORLG00015018270	lrpprc	94	71.630	ENSTNIG00000007470	lrpprc	100	65.630	Tetraodon_nigroviridis
ENSORLG00015018270	lrpprc	95	56.769	ENSTTRG00000006403	LRPPRC	91	56.769	Tursiops_truncatus
ENSORLG00015018270	lrpprc	84	60.794	ENSVPAG00000008993	LRPPRC	93	53.051	Vicugna_pacos
ENSORLG00015018270	lrpprc	99	62.322	ENSXETG00000009296	lrpprc	95	62.322	Xenopus_tropicalis
ENSORLG00015018270	lrpprc	97	72.929	ENSXCOG00000013343	lrpprc	97	72.929	Xiphophorus_couchianus
ENSORLG00015018270	lrpprc	99	68.317	ENSXMAG00000018108	lrpprc	99	68.458	Xiphophorus_maculatus