EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015018379 (Gene tree)
Gene ID: -
Gene Symbol: rbm5
Alias: -
Full Name: RNA binding motif protein 5
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 14735 bases
Position: chr5:7769286-7784020
Accession: ZDB-GENE-030131-3022
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015017327	zf-RanBP	PF00641.18	3.4e-10	1	1
ENSORLP00015017275	zf-RanBP	PF00641.18	2.2e-08	1	1
ENSORLP00015017275	RRM_1	PF00076.22	1.1e-13	1	2
ENSORLP00015017275	RRM_1	PF00076.22	1.1e-13	2	2
ENSORLP00015017327	RRM_1	PF00076.22	1.7e-13	1	2
ENSORLP00015017327	RRM_1	PF00076.22	1.7e-13	2	2
ENSORLP00015017327	G-patch	PF01585.23	2.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015025780	-	3374	-	ENSORLP00015017327	845 (aa)	-	-
ENSORLT00015025658	-	2160	-	ENSORLP00015017275	719 (aa)	-	-

Gene Model

Click here to download ENSORLG00015018379's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015018379's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015018379	rbm5	96	57.946	ENSORLG00015002854	-	98	56.865
ENSORLG00015018379	rbm5	88	43.073	ENSORLG00015021021	rbm10	78	43.210

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015018379	rbm5	99	76.190	ENSG00000003756	RBM5	91	76.190	Homo_sapiens
ENSORLG00015018379	rbm5	97	97.619	ENSAPOG00000016625	rbm5	91	97.619	Acanthochromis_polyacanthus
ENSORLG00015018379	rbm5	97	78.049	ENSAPOG00000006011	-	91	78.049	Acanthochromis_polyacanthus
ENSORLG00015018379	rbm5	99	76.190	ENSAMEG00000012005	RBM5	91	76.190	Ailuropoda_melanoleuca
ENSORLG00015018379	rbm5	97	80.488	ENSACIG00000021310	-	91	80.488	Amphilophus_citrinellus
ENSORLG00015018379	rbm5	72	100.000	ENSACIG00000007571	rbm5	87	100.000	Amphilophus_citrinellus
ENSORLG00015018379	rbm5	98	78.049	ENSAOCG00000017312	-	91	78.049	Amphiprion_ocellaris
ENSORLG00015018379	rbm5	97	97.619	ENSAOCG00000002880	rbm5	91	97.619	Amphiprion_ocellaris
ENSORLG00015018379	rbm5	98	78.049	ENSAPEG00000018222	RBM5	91	78.049	Amphiprion_percula
ENSORLG00015018379	rbm5	86	97.619	ENSAPEG00000011862	rbm5	84	97.619	Amphiprion_percula
ENSORLG00015018379	rbm5	99	97.619	ENSATEG00000024663	rbm5	91	97.619	Anabas_testudineus
ENSORLG00015018379	rbm5	97	85.366	ENSATEG00000003838	-	91	85.366	Anabas_testudineus
ENSORLG00015018379	rbm5	92	71.429	ENSAPLG00000011176	RBM5	99	64.277	Anas_platyrhynchos
ENSORLG00015018379	rbm5	90	71.429	ENSACAG00000008580	RBM5	91	71.429	Anolis_carolinensis
ENSORLG00015018379	rbm5	99	76.190	ENSANAG00000025199	RBM5	91	76.190	Aotus_nancymaae
ENSORLG00015018379	rbm5	97	82.927	ENSACLG00000024198	RBM5	100	83.333	Astatotilapia_calliptera
ENSORLG00015018379	rbm5	99	100.000	ENSACLG00000012748	rbm5	91	100.000	Astatotilapia_calliptera
ENSORLG00015018379	rbm5	80	90.476	ENSAMXG00000008146	rbm5	90	90.476	Astyanax_mexicanus
ENSORLG00015018379	rbm5	99	76.190	ENSBTAG00000006330	RBM5	91	76.190	Bos_taurus
ENSORLG00015018379	rbm5	99	76.190	ENSCJAG00000004740	RBM5	100	67.742	Callithrix_jacchus
ENSORLG00015018379	rbm5	99	76.190	ENSCAFG00000010866	RBM5	91	76.190	Canis_familiaris
ENSORLG00015018379	rbm5	99	76.190	ENSCAFG00020022126	RBM5	91	76.190	Canis_lupus_dingo
ENSORLG00015018379	rbm5	99	76.190	ENSCHIG00000018435	RBM5	91	76.190	Capra_hircus
ENSORLG00015018379	rbm5	94	57.584	ENSTSYG00000004158	RBM5	100	60.594	Carlito_syrichta
ENSORLG00015018379	rbm5	99	76.190	ENSCAPG00000013495	RBM5	90	76.190	Cavia_aperea
ENSORLG00015018379	rbm5	99	76.190	ENSCPOG00000008151	RBM5	91	76.190	Cavia_porcellus
ENSORLG00015018379	rbm5	100	76.190	ENSCCAG00000026401	RBM5	92	76.190	Cebus_capucinus
ENSORLG00015018379	rbm5	99	76.190	ENSCATG00000041038	RBM5	91	76.190	Cercocebus_atys
ENSORLG00015018379	rbm5	99	76.190	ENSCLAG00000007873	RBM5	92	76.190	Chinchilla_lanigera
ENSORLG00015018379	rbm5	99	76.190	ENSCSAG00000014401	RBM5	91	76.190	Chlorocebus_sabaeus
ENSORLG00015018379	rbm5	81	56.628	ENSCHOG00000009429	RBM5	85	56.815	Choloepus_hoffmanni
ENSORLG00015018379	rbm5	90	71.429	ENSCPBG00000002406	RBM5	91	71.429	Chrysemys_picta_bellii
ENSORLG00015018379	rbm5	99	76.190	ENSCANG00000031250	RBM5	91	76.190	Colobus_angolensis_palliatus
ENSORLG00015018379	rbm5	99	76.190	ENSCGRG00001010543	Rbm5	91	76.190	Cricetulus_griseus_chok1gshd
ENSORLG00015018379	rbm5	99	76.190	ENSCGRG00000008475	Rbm5	91	76.190	Cricetulus_griseus_crigri
ENSORLG00015018379	rbm5	91	100.000	ENSCSEG00000000596	rbm5	89	100.000	Cynoglossus_semilaevis
ENSORLG00015018379	rbm5	100	97.619	ENSCVAG00000005655	rbm5	91	97.619	Cyprinodon_variegatus
ENSORLG00015018379	rbm5	82	83.333	ENSDARG00000098280	rbm5	91	83.333	Danio_rerio
ENSORLG00015018379	rbm5	99	76.190	ENSDNOG00000011756	RBM5	91	76.190	Dasypus_novemcinctus
ENSORLG00015018379	rbm5	99	76.190	ENSDORG00000007692	Rbm5	91	76.190	Dipodomys_ordii
ENSORLG00015018379	rbm5	90	76.190	ENSETEG00000012773	RBM5	84	76.190	Echinops_telfairi
ENSORLG00015018379	rbm5	89	57.143	ENSEBUG00000017034	rbm5	79	60.000	Eptatretus_burgeri
ENSORLG00015018379	rbm5	99	76.190	ENSEASG00005011835	RBM5	91	76.190	Equus_asinus_asinus
ENSORLG00015018379	rbm5	99	76.190	ENSECAG00000020447	RBM5	91	76.190	Equus_caballus
ENSORLG00015018379	rbm5	79	72.414	ENSEEUG00000005943	RBM5	87	72.414	Erinaceus_europaeus
ENSORLG00015018379	rbm5	99	85.714	ENSELUG00000022467	rbm5	91	85.714	Esox_lucius
ENSORLG00015018379	rbm5	99	76.190	ENSFCAG00000014639	RBM5	91	76.190	Felis_catus
ENSORLG00015018379	rbm5	91	71.429	ENSFALG00000008828	RBM5	76	71.429	Ficedula_albicollis
ENSORLG00015018379	rbm5	99	76.190	ENSFDAG00000001897	RBM5	92	76.190	Fukomys_damarensis
ENSORLG00015018379	rbm5	99	97.619	ENSFHEG00000015954	rbm5	100	97.619	Fundulus_heteroclitus
ENSORLG00015018379	rbm5	97	85.714	ENSGMOG00000016224	rbm5	91	85.714	Gadus_morhua
ENSORLG00015018379	rbm5	88	78.049	ENSGMOG00000007810	-	80	78.049	Gadus_morhua
ENSORLG00015018379	rbm5	91	71.429	ENSGALG00000039288	RBM5	76	71.429	Gallus_gallus
ENSORLG00015018379	rbm5	99	97.619	ENSGAFG00000010690	rbm5	91	97.619	Gambusia_affinis
ENSORLG00015018379	rbm5	97	97.619	ENSGACG00000010469	rbm5	91	97.619	Gasterosteus_aculeatus
ENSORLG00015018379	rbm5	97	75.610	ENSGACG00000000858	-	91	75.610	Gasterosteus_aculeatus
ENSORLG00015018379	rbm5	87	62.332	ENSGAGG00000007935	RBM5	99	61.205	Gopherus_agassizii
ENSORLG00015018379	rbm5	99	76.190	ENSGGOG00000014490	RBM5	91	76.190	Gorilla_gorilla
ENSORLG00015018379	rbm5	97	82.927	ENSHBUG00000011901	-	100	83.333	Haplochromis_burtoni
ENSORLG00015018379	rbm5	99	100.000	ENSHBUG00000001941	rbm5	91	100.000	Haplochromis_burtoni
ENSORLG00015018379	rbm5	99	76.190	ENSHGLG00000014844	RBM5	92	76.190	Heterocephalus_glaber_female
ENSORLG00015018379	rbm5	99	76.190	ENSHGLG00100010739	RBM5	92	76.190	Heterocephalus_glaber_male
ENSORLG00015018379	rbm5	95	76.724	ENSHCOG00000017110	rbm5	99	77.709	Hippocampus_comes
ENSORLG00015018379	rbm5	99	58.140	ENSHCOG00000004536	-	100	56.402	Hippocampus_comes
ENSORLG00015018379	rbm5	97	90.476	ENSIPUG00000000640	rbm5	91	90.476	Ictalurus_punctatus
ENSORLG00015018379	rbm5	99	76.190	ENSSTOG00000013856	RBM5	92	76.190	Ictidomys_tridecemlineatus
ENSORLG00015018379	rbm5	99	76.190	ENSJJAG00000008844	Rbm5	91	76.190	Jaculus_jaculus
ENSORLG00015018379	rbm5	99	100.000	ENSKMAG00000006663	rbm5	91	100.000	Kryptolebias_marmoratus
ENSORLG00015018379	rbm5	71	80.488	ENSLBEG00000002522	-	87	80.488	Labrus_bergylta
ENSORLG00015018379	rbm5	97	80.488	ENSLBEG00000010877	-	85	80.488	Labrus_bergylta
ENSORLG00015018379	rbm5	99	97.619	ENSLBEG00000020858	rbm5	91	97.619	Labrus_bergylta
ENSORLG00015018379	rbm5	52	76.190	ENSLACG00000016572	RBM5	91	76.190	Latimeria_chalumnae
ENSORLG00015018379	rbm5	99	78.571	ENSLOCG00000010774	rbm5	92	78.571	Lepisosteus_oculatus
ENSORLG00015018379	rbm5	99	76.190	ENSLAFG00000006733	RBM5	91	76.190	Loxodonta_africana
ENSORLG00015018379	rbm5	99	76.190	ENSMFAG00000031609	RBM5	91	76.190	Macaca_fascicularis
ENSORLG00015018379	rbm5	99	76.190	ENSMMUG00000004921	RBM5	91	76.190	Macaca_mulatta
ENSORLG00015018379	rbm5	99	76.190	ENSMNEG00000044394	RBM5	91	76.190	Macaca_nemestrina
ENSORLG00015018379	rbm5	99	76.190	ENSMLEG00000034689	RBM5	91	76.190	Mandrillus_leucophaeus
ENSORLG00015018379	rbm5	99	95.238	ENSMAMG00000017277	rbm5	99	95.238	Mastacembelus_armatus
ENSORLG00015018379	rbm5	97	82.927	ENSMAMG00000023948	-	90	82.927	Mastacembelus_armatus
ENSORLG00015018379	rbm5	99	100.000	ENSMZEG00005015328	rbm5	91	100.000	Maylandia_zebra
ENSORLG00015018379	rbm5	99	82.927	ENSMZEG00005010035	-	91	82.927	Maylandia_zebra
ENSORLG00015018379	rbm5	91	71.429	ENSMGAG00000003972	RBM5	100	64.177	Meleagris_gallopavo
ENSORLG00015018379	rbm5	99	76.190	ENSMAUG00000020572	Rbm5	90	76.190	Mesocricetus_auratus
ENSORLG00015018379	rbm5	99	76.190	ENSMICG00000016179	RBM5	91	76.190	Microcebus_murinus
ENSORLG00015018379	rbm5	99	76.190	ENSMOCG00000017479	Rbm5	91	76.190	Microtus_ochrogaster
ENSORLG00015018379	rbm5	98	97.619	ENSMMOG00000015342	rbm5	91	97.619	Mola_mola
ENSORLG00015018379	rbm5	99	53.326	ENSMMOG00000021804	-	99	53.730	Mola_mola
ENSORLG00015018379	rbm5	99	73.810	ENSMODG00000012301	RBM5	91	73.810	Monodelphis_domestica
ENSORLG00015018379	rbm5	99	73.027	ENSMALG00000000609	rbm5	99	73.498	Monopterus_albus
ENSORLG00015018379	rbm5	97	78.049	ENSMALG00000016769	-	91	78.049	Monopterus_albus
ENSORLG00015018379	rbm5	99	76.190	MGP_CAROLIEiJ_G0032660	Rbm5	91	76.190	Mus_caroli
ENSORLG00015018379	rbm5	99	76.190	ENSMUSG00000032580	Rbm5	91	76.190	Mus_musculus
ENSORLG00015018379	rbm5	99	76.190	MGP_PahariEiJ_G0015528	Rbm5	91	76.190	Mus_pahari
ENSORLG00015018379	rbm5	99	76.190	MGP_SPRETEiJ_G0033805	Rbm5	91	76.190	Mus_spretus
ENSORLG00015018379	rbm5	99	76.190	ENSMLUG00000007875	RBM5	91	76.190	Myotis_lucifugus
ENSORLG00015018379	rbm5	99	76.190	ENSNGAG00000011777	Rbm5	91	76.190	Nannospalax_galili
ENSORLG00015018379	rbm5	99	100.000	ENSNBRG00000018097	rbm5	91	100.000	Neolamprologus_brichardi
ENSORLG00015018379	rbm5	94	82.927	ENSNBRG00000004400	RBM5	88	82.927	Neolamprologus_brichardi
ENSORLG00015018379	rbm5	99	76.190	ENSNLEG00000006943	RBM5	91	76.190	Nomascus_leucogenys
ENSORLG00015018379	rbm5	84	73.810	ENSMEUG00000012994	RBM5	100	58.167	Notamacropus_eugenii
ENSORLG00015018379	rbm5	90	76.190	ENSOPRG00000015154	RBM5	84	76.190	Ochotona_princeps
ENSORLG00015018379	rbm5	99	69.767	ENSODEG00000019111	-	91	69.767	Octodon_degus
ENSORLG00015018379	rbm5	99	76.190	ENSODEG00000016254	-	91	76.190	Octodon_degus
ENSORLG00015018379	rbm5	97	82.927	ENSONIG00000019007	RBM5	91	82.927	Oreochromis_niloticus
ENSORLG00015018379	rbm5	99	100.000	ENSONIG00000004107	rbm5	92	100.000	Oreochromis_niloticus
ENSORLG00015018379	rbm5	85	71.429	ENSOANG00000006557	RBM5	100	62.763	Ornithorhynchus_anatinus
ENSORLG00015018379	rbm5	99	76.190	ENSOCUG00000011652	RBM5	91	76.190	Oryctolagus_cuniculus
ENSORLG00015018379	rbm5	99	80.488	ENSORLG00000001053	-	91	80.488	Oryzias_latipes
ENSORLG00015018379	rbm5	95	99.255	ENSORLG00000003369	rbm5	99	99.255	Oryzias_latipes
ENSORLG00015018379	rbm5	96	57.264	ENSORLG00020006782	-	98	56.077	Oryzias_latipes_hni
ENSORLG00015018379	rbm5	100	99.053	ENSORLG00020021744	rbm5	100	99.053	Oryzias_latipes_hni
ENSORLG00015018379	rbm5	67	69.792	ENSOMEG00000010653	-	97	49.921	Oryzias_melastigma
ENSORLG00015018379	rbm5	100	97.619	ENSOMEG00000002219	rbm5	100	92.749	Oryzias_melastigma
ENSORLG00015018379	rbm5	88	76.190	ENSOGAG00000004205	RBM5	89	76.190	Otolemur_garnettii
ENSORLG00015018379	rbm5	99	76.190	ENSOARG00000010923	RBM5	91	76.190	Ovis_aries
ENSORLG00015018379	rbm5	99	76.190	ENSPPAG00000043010	RBM5	91	76.190	Pan_paniscus
ENSORLG00015018379	rbm5	99	76.190	ENSPPRG00000005404	RBM5	91	76.190	Panthera_pardus
ENSORLG00015018379	rbm5	99	76.190	ENSPTIG00000000962	RBM5	91	76.190	Panthera_tigris_altaica
ENSORLG00015018379	rbm5	99	76.190	ENSPTRG00000014946	RBM5	91	76.190	Pan_troglodytes
ENSORLG00015018379	rbm5	99	76.190	ENSPANG00000018507	RBM5	91	76.190	Papio_anubis
ENSORLG00015018379	rbm5	99	83.333	ENSPKIG00000024837	RBM5	92	83.333	Paramormyrops_kingsleyae
ENSORLG00015018379	rbm5	77	58.234	ENSPKIG00000019187	-	100	58.234	Paramormyrops_kingsleyae
ENSORLG00015018379	rbm5	85	71.429	ENSPSIG00000016073	RBM5	100	63.431	Pelodiscus_sinensis
ENSORLG00015018379	rbm5	79	61.630	ENSPMGG00000017347	rbm5	100	62.186	Periophthalmus_magnuspinnatus
ENSORLG00015018379	rbm5	88	82.051	ENSPMGG00000004719	-	99	80.952	Periophthalmus_magnuspinnatus
ENSORLG00015018379	rbm5	86	61.905	ENSPMAG00000001998	rbm5	91	61.905	Petromyzon_marinus
ENSORLG00015018379	rbm5	99	73.810	ENSPCIG00000021531	RBM5	91	73.810	Phascolarctos_cinereus
ENSORLG00015018379	rbm5	99	97.619	ENSPLAG00000006318	rbm5	91	97.619	Poecilia_latipinna
ENSORLG00015018379	rbm5	99	97.619	ENSPMEG00000004295	rbm5	91	97.619	Poecilia_mexicana
ENSORLG00015018379	rbm5	69	97.619	ENSPMEG00000008651	rbm5	85	97.619	Poecilia_mexicana
ENSORLG00015018379	rbm5	99	97.619	ENSPREG00000003795	rbm5	91	97.619	Poecilia_reticulata
ENSORLG00015018379	rbm5	61	63.348	ENSPCAG00000005459	RBM5	73	63.348	Procavia_capensis
ENSORLG00015018379	rbm5	99	76.190	ENSPCOG00000025840	RBM5	91	76.190	Propithecus_coquereli
ENSORLG00015018379	rbm5	99	76.190	ENSPVAG00000006812	RBM5	91	76.190	Pteropus_vampyrus
ENSORLG00015018379	rbm5	99	100.000	ENSPNYG00000014787	rbm5	91	100.000	Pundamilia_nyererei
ENSORLG00015018379	rbm5	78	82.927	ENSPNYG00000006361	RBM5	90	82.927	Pundamilia_nyererei
ENSORLG00015018379	rbm5	97	95.238	ENSPNAG00000012070	rbm5	91	95.238	Pygocentrus_nattereri
ENSORLG00015018379	rbm5	99	76.190	ENSRNOG00000018153	Rbm5	91	76.190	Rattus_norvegicus
ENSORLG00015018379	rbm5	99	76.190	ENSRBIG00000012679	RBM5	91	76.190	Rhinopithecus_bieti
ENSORLG00015018379	rbm5	99	76.190	ENSRROG00000041331	RBM5	91	76.190	Rhinopithecus_roxellana
ENSORLG00015018379	rbm5	99	76.190	ENSSBOG00000006324	RBM5	91	76.190	Saimiri_boliviensis_boliviensis
ENSORLG00015018379	rbm5	99	73.810	ENSSHAG00000018260	RBM5	91	73.810	Sarcophilus_harrisii
ENSORLG00015018379	rbm5	99	78.571	ENSSFOG00015019645	-	100	70.650	Scleropages_formosus
ENSORLG00015018379	rbm5	100	73.077	ENSSFOG00015019052	rbm5	94	73.458	Scleropages_formosus
ENSORLG00015018379	rbm5	99	97.619	ENSSMAG00000017106	rbm5	91	97.619	Scophthalmus_maximus
ENSORLG00015018379	rbm5	99	95.238	ENSSDUG00000019775	rbm5	91	95.238	Seriola_dumerili
ENSORLG00015018379	rbm5	97	80.488	ENSSLDG00000015996	-	91	80.488	Seriola_lalandi_dorsalis
ENSORLG00015018379	rbm5	99	95.238	ENSSLDG00000002329	rbm5	91	95.238	Seriola_lalandi_dorsalis
ENSORLG00015018379	rbm5	51	76.623	ENSSARG00000009724	-	63	76.623	Sorex_araneus
ENSORLG00015018379	rbm5	98	71.429	ENSSPUG00000001876	RBM5	79	71.429	Sphenodon_punctatus
ENSORLG00015018379	rbm5	97	78.049	ENSSPAG00000020011	-	91	78.049	Stegastes_partitus
ENSORLG00015018379	rbm5	97	97.619	ENSSPAG00000019638	rbm5	91	97.619	Stegastes_partitus
ENSORLG00015018379	rbm5	99	73.810	ENSSSCG00000011395	RBM5	100	73.810	Sus_scrofa
ENSORLG00015018379	rbm5	91	71.429	ENSTGUG00000006417	RBM5	89	71.429	Taeniopygia_guttata
ENSORLG00015018379	rbm5	99	97.619	ENSTRUG00000008292	rbm5	91	97.619	Takifugu_rubripes
ENSORLG00015018379	rbm5	99	94.286	ENSTNIG00000014742	rbm5	88	94.286	Tetraodon_nigroviridis
ENSORLG00015018379	rbm5	81	76.190	ENSTBEG00000005424	RBM5	81	76.190	Tupaia_belangeri
ENSORLG00015018379	rbm5	90	75.610	ENSTTRG00000007717	RBM5	91	75.610	Tursiops_truncatus
ENSORLG00015018379	rbm5	99	76.190	ENSUAMG00000028347	RBM5	91	76.190	Ursus_americanus
ENSORLG00015018379	rbm5	99	76.190	ENSUMAG00000022027	RBM5	100	67.949	Ursus_maritimus
ENSORLG00015018379	rbm5	95	56.588	ENSVPAG00000009388	RBM5	100	60.103	Vicugna_pacos
ENSORLG00015018379	rbm5	99	76.190	ENSVVUG00000028647	RBM5	91	76.190	Vulpes_vulpes
ENSORLG00015018379	rbm5	99	97.619	ENSXMAG00000016369	rbm5	91	97.619	Xiphophorus_maculatus