EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015018536 (Gene tree)
Gene ID: -
Gene Symbol: rad54b
Alias: -
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 11549 bases
Position: chr16:18175508-18187056
Accession: 101169636
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015017512	ResIII	PF04851.15	6.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015025985	-	3029	-	ENSORLP00015017492	324 (aa)	-	-
ENSORLT00015034764	-	3074	XM_011485236	ENSORLP00015017512	935 (aa)	XP_011483538	-

Gene Model

Click here to download ENSORLG00015018536's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015018536's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015018536	rad54b	71	44.818	ENSORLG00015002907	rad54l	88	44.818
ENSORLG00015018536	rad54b	56	31.296	ENSORLG00015001680	chd1l	56	31.296
ENSORLG00015018536	rad54b	57	30.118	ENSORLG00015010250	ercc6l2	55	30.118
ENSORLG00015018536	rad54b	52	42.500	ENSORLG00015007108	ercc6l	82	42.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015018536	rad54b	99	54.145	ENSG00000197275	RAD54B	99	54.145	Homo_sapiens
ENSORLG00015018536	rad54b	78	59.244	ENSG00000265817	FSBP	99	59.244	Homo_sapiens
ENSORLG00015018536	rad54b	99	55.000	ENSAMEG00000005834	-	99	55.000	Ailuropoda_melanoleuca
ENSORLG00015018536	rad54b	90	84.131	ENSACIG00000013005	rad54b	95	84.131	Amphilophus_citrinellus
ENSORLG00015018536	rad54b	100	78.791	ENSAOCG00000008523	rad54b	100	78.897	Amphiprion_ocellaris
ENSORLG00015018536	rad54b	100	72.987	ENSAPEG00000001673	rad54b	100	73.093	Amphiprion_percula
ENSORLG00015018536	rad54b	100	77.143	ENSATEG00000001527	rad54b	100	77.143	Anabas_testudineus
ENSORLG00015018536	rad54b	99	56.462	ENSAPLG00000014366	-	99	56.013	Anas_platyrhynchos
ENSORLG00015018536	rad54b	84	61.343	ENSACAG00000003671	-	98	61.343	Anolis_carolinensis
ENSORLG00015018536	rad54b	69	61.444	ENSANAG00000019528	-	99	61.444	Aotus_nancymaae
ENSORLG00015018536	rad54b	91	85.056	ENSACLG00000007826	rad54b	99	85.056	Astatotilapia_calliptera
ENSORLG00015018536	rad54b	83	67.726	ENSAMXG00000039985	rad54b	94	67.551	Astyanax_mexicanus
ENSORLG00015018536	rad54b	99	55.068	ENSBTAG00000000632	RAD54B	99	55.068	Bos_taurus
ENSORLG00015018536	rad54b	77	35.128	WBGene00013792	Y116A8C.13	85	35.356	Caenorhabditis_elegans
ENSORLG00015018536	rad54b	99	54.584	ENSCJAG00000000080	-	99	59.324	Callithrix_jacchus
ENSORLG00015018536	rad54b	99	55.614	ENSCAFG00000009179	RAD54B	99	55.614	Canis_familiaris
ENSORLG00015018536	rad54b	99	55.614	ENSCAFG00020012084	-	99	55.614	Canis_lupus_dingo
ENSORLG00015018536	rad54b	99	55.474	ENSCHIG00000008230	-	99	55.474	Capra_hircus
ENSORLG00015018536	rad54b	99	54.937	ENSTSYG00000013234	-	99	54.937	Carlito_syrichta
ENSORLG00015018536	rad54b	99	54.565	ENSCPOG00000011643	-	99	54.565	Cavia_porcellus
ENSORLG00015018536	rad54b	99	54.651	ENSCCAG00000011754	-	99	59.405	Cebus_capucinus
ENSORLG00015018536	rad54b	99	54.171	ENSCATG00000030661	-	99	59.189	Cercocebus_atys
ENSORLG00015018536	rad54b	99	54.942	ENSCLAG00000010476	-	99	54.942	Chinchilla_lanigera
ENSORLG00015018536	rad54b	99	54.382	ENSCSAG00000012712	-	99	54.382	Chlorocebus_sabaeus
ENSORLG00015018536	rad54b	99	55.824	ENSCPBG00000003204	-	98	57.901	Chrysemys_picta_bellii
ENSORLG00015018536	rad54b	99	54.382	ENSCANG00000017939	-	99	59.324	Colobus_angolensis_palliatus
ENSORLG00015018536	rad54b	84	60.025	ENSCGRG00001020184	Rad54b	89	60.025	Cricetulus_griseus_chok1gshd
ENSORLG00015018536	rad54b	99	52.671	ENSCGRG00000016752	Rad54b	88	58.883	Cricetulus_griseus_crigri
ENSORLG00015018536	rad54b	90	80.076	ENSCSEG00000001601	rad54b	99	80.076	Cynoglossus_semilaevis
ENSORLG00015018536	rad54b	100	74.814	ENSCVAG00000009200	rad54b	100	74.814	Cyprinodon_variegatus
ENSORLG00015018536	rad54b	99	61.684	ENSDARG00000092134	rad54b	99	69.003	Danio_rerio
ENSORLG00015018536	rad54b	99	55.283	ENSDNOG00000015535	-	99	55.283	Dasypus_novemcinctus
ENSORLG00015018536	rad54b	99	55.297	ENSDORG00000002492	Rad54b	99	55.297	Dipodomys_ordii
ENSORLG00015018536	rad54b	87	58.029	ENSETEG00000010605	-	100	58.029	Echinops_telfairi
ENSORLG00015018536	rad54b	84	50.929	ENSEBUG00000009104	rad54b	98	46.583	Eptatretus_burgeri
ENSORLG00015018536	rad54b	84	60.853	ENSEASG00005004021	-	89	60.853	Equus_asinus_asinus
ENSORLG00015018536	rad54b	99	55.308	ENSECAG00000021949	-	99	55.308	Equus_caballus
ENSORLG00015018536	rad54b	70	53.988	ENSEEUG00000008056	-	72	53.988	Erinaceus_europaeus
ENSORLG00015018536	rad54b	100	70.285	ENSELUG00000009287	rad54b	100	70.495	Esox_lucius
ENSORLG00015018536	rad54b	84	61.222	ENSFCAG00000015513	-	99	60.676	Felis_catus
ENSORLG00015018536	rad54b	99	56.276	ENSFALG00000005467	-	99	56.276	Ficedula_albicollis
ENSORLG00015018536	rad54b	99	55.059	ENSFDAG00000020541	-	99	55.059	Fukomys_damarensis
ENSORLG00015018536	rad54b	89	77.671	ENSFHEG00000014382	rad54b	90	77.791	Fundulus_heteroclitus
ENSORLG00015018536	rad54b	84	78.788	ENSGMOG00000014774	rad54b	99	78.788	Gadus_morhua
ENSORLG00015018536	rad54b	99	56.705	ENSGALG00000043597	RAD54B	99	56.705	Gallus_gallus
ENSORLG00015018536	rad54b	99	79.215	ENSGAFG00000007901	rad54b	99	80.882	Gambusia_affinis
ENSORLG00015018536	rad54b	99	74.149	ENSGACG00000009128	rad54b	99	74.149	Gasterosteus_aculeatus
ENSORLG00015018536	rad54b	99	56.237	ENSGAGG00000018747	-	99	56.237	Gopherus_agassizii
ENSORLG00015018536	rad54b	99	54.162	ENSGGOG00000023516	-	99	54.162	Gorilla_gorilla
ENSORLG00015018536	rad54b	100	80.720	ENSHBUG00000016017	rad54b	99	80.720	Haplochromis_burtoni
ENSORLG00015018536	rad54b	99	54.057	ENSHGLG00000008263	RAD54B	99	54.057	Heterocephalus_glaber_female
ENSORLG00015018536	rad54b	99	53.508	ENSHGLG00100008108	-	99	53.508	Heterocephalus_glaber_male
ENSORLG00015018536	rad54b	99	69.083	ENSHCOG00000004764	rad54b	98	73.424	Hippocampus_comes
ENSORLG00015018536	rad54b	99	60.928	ENSIPUG00000018531	rad54b	99	60.928	Ictalurus_punctatus
ENSORLG00015018536	rad54b	99	53.439	ENSSTOG00000010791	-	99	53.439	Ictidomys_tridecemlineatus
ENSORLG00015018536	rad54b	99	54.565	ENSJJAG00000010314	Rad54b	99	54.565	Jaculus_jaculus
ENSORLG00015018536	rad54b	100	71.398	ENSKMAG00000004744	rad54b	100	71.398	Kryptolebias_marmoratus
ENSORLG00015018536	rad54b	80	64.761	ENSLACG00000000859	-	100	64.761	Latimeria_chalumnae
ENSORLG00015018536	rad54b	99	62.710	ENSLOCG00000010100	rad54b	99	63.064	Lepisosteus_oculatus
ENSORLG00015018536	rad54b	84	58.728	ENSLAFG00000015315	-	97	58.728	Loxodonta_africana
ENSORLG00015018536	rad54b	99	54.277	ENSMFAG00000031629	-	99	59.189	Macaca_fascicularis
ENSORLG00015018536	rad54b	99	54.277	ENSMMUG00000005659	-	99	54.277	Macaca_mulatta
ENSORLG00015018536	rad54b	99	54.277	ENSMNEG00000016408	-	99	54.277	Macaca_nemestrina
ENSORLG00015018536	rad54b	99	54.277	ENSMLEG00000006946	-	99	54.277	Mandrillus_leucophaeus
ENSORLG00015018536	rad54b	100	72.890	ENSMAMG00000012269	rad54b	99	73.207	Mastacembelus_armatus
ENSORLG00015018536	rad54b	100	80.720	ENSMZEG00005005281	rad54b	96	85.056	Maylandia_zebra
ENSORLG00015018536	rad54b	99	55.439	ENSMGAG00000012024	-	99	55.439	Meleagris_gallopavo
ENSORLG00015018536	rad54b	99	53.376	ENSMAUG00000013586	Rad54b	99	53.376	Mesocricetus_auratus
ENSORLG00015018536	rad54b	87	58.888	ENSMICG00000000754	-	93	58.888	Microcebus_murinus
ENSORLG00015018536	rad54b	99	53.191	ENSMOCG00000020035	Rad54b	99	53.191	Microtus_ochrogaster
ENSORLG00015018536	rad54b	87	80.637	ENSMMOG00000003394	rad54b	92	80.637	Mola_mola
ENSORLG00015018536	rad54b	85	59.085	ENSMODG00000007343	-	97	59.085	Monodelphis_domestica
ENSORLG00015018536	rad54b	69	83.075	ENSMALG00000001520	rad54b	100	83.075	Monopterus_albus
ENSORLG00015018536	rad54b	99	54.234	MGP_CAROLIEiJ_G0025810	Rad54b	99	54.234	Mus_caroli
ENSORLG00015018536	rad54b	99	53.305	ENSMUSG00000078773	Rad54b	99	53.305	Mus_musculus
ENSORLG00015018536	rad54b	99	54.216	MGP_PahariEiJ_G0023933	Rad54b	99	54.216	Mus_pahari
ENSORLG00015018536	rad54b	99	53.674	MGP_SPRETEiJ_G0026758	Rad54b	99	53.674	Mus_spretus
ENSORLG00015018536	rad54b	84	60.723	ENSMPUG00000008878	-	97	60.723	Mustela_putorius_furo
ENSORLG00015018536	rad54b	99	55.154	ENSMLUG00000008953	-	99	55.154	Myotis_lucifugus
ENSORLG00015018536	rad54b	99	53.985	ENSNGAG00000017537	Rad54b	99	53.708	Nannospalax_galili
ENSORLG00015018536	rad54b	92	85.043	ENSNBRG00000013394	rad54b	100	85.043	Neolamprologus_brichardi
ENSORLG00015018536	rad54b	99	54.316	ENSNLEG00000003062	-	99	59.244	Nomascus_leucogenys
ENSORLG00015018536	rad54b	67	63.333	ENSMEUG00000012426	-	69	63.333	Notamacropus_eugenii
ENSORLG00015018536	rad54b	74	77.273	ENSODEG00000002650	-	93	77.273	Octodon_degus
ENSORLG00015018536	rad54b	99	54.228	ENSODEG00000019564	-	99	54.228	Octodon_degus
ENSORLG00015018536	rad54b	100	81.356	ENSONIG00000006067	rad54b	100	81.356	Oreochromis_niloticus
ENSORLG00015018536	rad54b	81	60.574	ENSOANG00000011348	-	99	60.574	Ornithorhynchus_anatinus
ENSORLG00015018536	rad54b	99	53.651	ENSOCUG00000016478	-	99	53.651	Oryctolagus_cuniculus
ENSORLG00015018536	rad54b	100	98.186	ENSORLG00000008918	rad54b	100	98.186	Oryzias_latipes
ENSORLG00015018536	rad54b	69	97.214	ENSORLG00020012171	rad54b	100	97.214	Oryzias_latipes_hni
ENSORLG00015018536	rad54b	83	91.085	ENSOMEG00000004345	rad54b	100	91.085	Oryzias_melastigma
ENSORLG00015018536	rad54b	99	53.178	ENSOGAG00000007854	-	99	53.178	Otolemur_garnettii
ENSORLG00015018536	rad54b	84	61.278	ENSOARG00000007691	-	97	61.278	Ovis_aries
ENSORLG00015018536	rad54b	99	53.095	ENSPPAG00000029572	-	99	53.095	Pan_paniscus
ENSORLG00015018536	rad54b	84	61.097	ENSPPRG00000007571	-	99	60.541	Panthera_pardus
ENSORLG00015018536	rad54b	78	60.405	ENSPTIG00000012670	-	99	60.405	Panthera_tigris_altaica
ENSORLG00015018536	rad54b	99	54.316	ENSPTRG00000020427	-	99	59.244	Pan_troglodytes
ENSORLG00015018536	rad54b	99	54.277	ENSPANG00000019566	-	99	54.277	Papio_anubis
ENSORLG00015018536	rad54b	99	63.819	ENSPKIG00000014974	rad54b	99	63.819	Paramormyrops_kingsleyae
ENSORLG00015018536	rad54b	99	55.509	ENSPSIG00000002383	-	96	61.683	Pelodiscus_sinensis
ENSORLG00015018536	rad54b	99	54.207	ENSPEMG00000012133	Rad54b	99	54.207	Peromyscus_maniculatus_bairdii
ENSORLG00015018536	rad54b	83	58.958	ENSPMAG00000002916	rad54b	97	58.958	Petromyzon_marinus
ENSORLG00015018536	rad54b	84	60.606	ENSPCIG00000020151	-	91	60.354	Phascolarctos_cinereus
ENSORLG00015018536	rad54b	99	78.959	ENSPFOG00000023411	rad54b	99	78.959	Poecilia_formosa
ENSORLG00015018536	rad54b	99	78.640	ENSPLAG00000010430	rad54b	99	78.640	Poecilia_latipinna
ENSORLG00015018536	rad54b	99	79.065	ENSPMEG00000016873	rad54b	99	81.187	Poecilia_mexicana
ENSORLG00015018536	rad54b	99	79.153	ENSPREG00000018443	rad54b	99	79.153	Poecilia_reticulata
ENSORLG00015018536	rad54b	99	54.316	ENSPPYG00000018750	-	99	54.316	Pongo_abelii
ENSORLG00015018536	rad54b	99	54.757	ENSPCOG00000026845	-	99	59.239	Propithecus_coquereli
ENSORLG00015018536	rad54b	79	59.921	ENSPVAG00000000261	-	86	59.921	Pteropus_vampyrus
ENSORLG00015018536	rad54b	85	82.981	ENSPNYG00000018303	rad54b	97	82.981	Pundamilia_nyererei
ENSORLG00015018536	rad54b	99	62.025	ENSPNAG00000000295	rad54b	99	62.025	Pygocentrus_nattereri
ENSORLG00015018536	rad54b	84	59.747	ENSRNOG00000039949	Rad54b	88	59.747	Rattus_norvegicus
ENSORLG00015018536	rad54b	99	53.854	ENSRBIG00000020419	-	99	53.854	Rhinopithecus_bieti
ENSORLG00015018536	rad54b	99	53.854	ENSRROG00000039897	-	99	53.854	Rhinopithecus_roxellana
ENSORLG00015018536	rad54b	77	36.613	YBR073W	RDH54	80	36.829	Saccharomyces_cerevisiae
ENSORLG00015018536	rad54b	99	54.488	ENSSBOG00000028501	-	99	54.488	Saimiri_boliviensis_boliviensis
ENSORLG00015018536	rad54b	99	55.757	ENSSHAG00000017038	-	99	55.757	Sarcophilus_harrisii
ENSORLG00015018536	rad54b	61	71.831	ENSSFOG00015008483	rad54b	89	71.831	Scleropages_formosus
ENSORLG00015018536	rad54b	99	78.178	ENSSMAG00000018659	rad54b	99	80.123	Scophthalmus_maximus
ENSORLG00015018536	rad54b	97	79.498	ENSSDUG00000001122	rad54b	96	79.498	Seriola_dumerili
ENSORLG00015018536	rad54b	100	79.197	ENSSLDG00000013787	rad54b	100	79.197	Seriola_lalandi_dorsalis
ENSORLG00015018536	rad54b	99	55.824	ENSSPUG00000016497	-	99	55.824	Sphenodon_punctatus
ENSORLG00015018536	rad54b	100	76.221	ENSSPAG00000012800	rad54b	100	76.221	Stegastes_partitus
ENSORLG00015018536	rad54b	99	55.745	ENSSSCG00000006101	-	98	61.209	Sus_scrofa
ENSORLG00015018536	rad54b	99	56.782	ENSTGUG00000011880	-	99	56.782	Taeniopygia_guttata
ENSORLG00015018536	rad54b	100	74.737	ENSTRUG00000010015	rad54b	99	75.079	Takifugu_rubripes
ENSORLG00015018536	rad54b	99	52.119	ENSTTRG00000006312	-	99	52.119	Tursiops_truncatus
ENSORLG00015018536	rad54b	99	55.000	ENSUMAG00000016401	-	99	55.000	Ursus_maritimus
ENSORLG00015018536	rad54b	84	61.461	ENSVPAG00000003157	-	87	61.461	Vicugna_pacos
ENSORLG00015018536	rad54b	99	47.396	ENSXETG00000025924	rad54b	98	53.392	Xenopus_tropicalis
ENSORLG00015018536	rad54b	88	80.680	ENSXMAG00000013141	rad54b	94	80.680	Xiphophorus_maculatus