EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015018598 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-117n7.8
Alias: -
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 49411 bases
Position: chr15:15872675-15922085
Accession: 25521
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015017567	S1	PF00575.23	1.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015026074	-	6591	-	ENSORLP00015017567	1019 (aa)	-	-

Gene Model

Click here to download ENSORLG00015018598's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015018598's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015018598	si:ch211-117n7.8	84	56.128	ENSG00000068784	SRBD1	86	56.128	Homo_sapiens
ENSORLG00015018598	si:ch211-117n7.8	100	76.413	ENSAPOG00000005103	si:ch211-117n7.8	100	76.413	Acanthochromis_polyacanthus
ENSORLG00015018598	si:ch211-117n7.8	85	56.300	ENSAMEG00000005993	SRBD1	99	51.068	Ailuropoda_melanoleuca
ENSORLG00015018598	si:ch211-117n7.8	97	76.512	ENSACIG00000009875	si:ch211-117n7.8	100	76.512	Amphilophus_citrinellus
ENSORLG00015018598	si:ch211-117n7.8	100	75.636	ENSAOCG00000024718	si:ch211-117n7.8	100	75.636	Amphiprion_ocellaris
ENSORLG00015018598	si:ch211-117n7.8	97	76.435	ENSAPEG00000002645	si:ch211-117n7.8	100	76.435	Amphiprion_percula
ENSORLG00015018598	si:ch211-117n7.8	100	74.023	ENSATEG00000010844	si:ch211-117n7.8	100	74.316	Anabas_testudineus
ENSORLG00015018598	si:ch211-117n7.8	93	54.667	ENSAPLG00000006313	SRBD1	96	54.769	Anas_platyrhynchos
ENSORLG00015018598	si:ch211-117n7.8	84	55.632	ENSANAG00000025573	SRBD1	99	50.578	Aotus_nancymaae
ENSORLG00015018598	si:ch211-117n7.8	100	76.413	ENSACLG00000024219	si:ch211-117n7.8	100	77.290	Astatotilapia_calliptera
ENSORLG00015018598	si:ch211-117n7.8	100	61.063	ENSAMXG00000004294	SRBD1	100	62.233	Astyanax_mexicanus
ENSORLG00015018598	si:ch211-117n7.8	84	56.028	ENSBTAG00000007508	SRBD1	97	49.800	Bos_taurus
ENSORLG00015018598	si:ch211-117n7.8	82	57.244	ENSCJAG00000000727	SRBD1	99	50.869	Callithrix_jacchus
ENSORLG00015018598	si:ch211-117n7.8	85	55.882	ENSCAFG00000002554	SRBD1	99	50.918	Canis_familiaris
ENSORLG00015018598	si:ch211-117n7.8	84	57.060	ENSCAFG00020026284	SRBD1	98	57.060	Canis_lupus_dingo
ENSORLG00015018598	si:ch211-117n7.8	82	57.244	ENSCHIG00000016535	SRBD1	98	50.918	Capra_hircus
ENSORLG00015018598	si:ch211-117n7.8	84	56.407	ENSTSYG00000012797	SRBD1	85	56.407	Carlito_syrichta
ENSORLG00015018598	si:ch211-117n7.8	84	56.577	ENSCPOG00000004773	SRBD1	86	56.577	Cavia_porcellus
ENSORLG00015018598	si:ch211-117n7.8	84	55.798	ENSCCAG00000025589	SRBD1	99	50.578	Cebus_capucinus
ENSORLG00015018598	si:ch211-117n7.8	84	55.913	ENSCATG00000039530	SRBD1	86	55.913	Cercocebus_atys
ENSORLG00015018598	si:ch211-117n7.8	84	57.276	ENSCLAG00000008623	SRBD1	85	57.276	Chinchilla_lanigera
ENSORLG00015018598	si:ch211-117n7.8	84	55.785	ENSCSAG00000013350	SRBD1	86	55.785	Chlorocebus_sabaeus
ENSORLG00015018598	si:ch211-117n7.8	72	67.347	ENSCHOG00000003805	SRBD1	71	67.347	Choloepus_hoffmanni
ENSORLG00015018598	si:ch211-117n7.8	82	57.833	ENSCPBG00000005677	SRBD1	98	52.178	Chrysemys_picta_bellii
ENSORLG00015018598	si:ch211-117n7.8	77	40.150	ENSCING00000005950	-	99	40.150	Ciona_intestinalis
ENSORLG00015018598	si:ch211-117n7.8	77	40.708	ENSCSAVG00000000861	-	99	40.708	Ciona_savignyi
ENSORLG00015018598	si:ch211-117n7.8	97	52.104	ENSCANG00000016307	SRBD1	99	51.212	Colobus_angolensis_palliatus
ENSORLG00015018598	si:ch211-117n7.8	84	56.961	ENSCGRG00001000513	Srbd1	85	56.961	Cricetulus_griseus_chok1gshd
ENSORLG00015018598	si:ch211-117n7.8	84	56.961	ENSCGRG00000002283	Srbd1	85	56.961	Cricetulus_griseus_crigri
ENSORLG00015018598	si:ch211-117n7.8	100	68.519	ENSCSEG00000000856	si:ch211-117n7.8	100	68.616	Cynoglossus_semilaevis
ENSORLG00015018598	si:ch211-117n7.8	85	80.435	ENSCVAG00000020212	si:ch211-117n7.8	99	73.494	Cyprinodon_variegatus
ENSORLG00015018598	si:ch211-117n7.8	84	55.657	ENSDNOG00000018686	SRBD1	85	55.657	Dasypus_novemcinctus
ENSORLG00015018598	si:ch211-117n7.8	99	50.532	ENSDORG00000010468	Srbd1	99	50.532	Dipodomys_ordii
ENSORLG00015018598	si:ch211-117n7.8	77	35.094	FBgn0051156	CG31156	79	35.589	Drosophila_melanogaster
ENSORLG00015018598	si:ch211-117n7.8	83	56.648	ENSETEG00000000739	SRBD1	89	56.648	Echinops_telfairi
ENSORLG00015018598	si:ch211-117n7.8	71	47.658	ENSEBUG00000008902	si:ch211-117n7.8	95	47.658	Eptatretus_burgeri
ENSORLG00015018598	si:ch211-117n7.8	84	53.961	ENSEASG00005003132	SRBD1	100	54.321	Equus_asinus_asinus
ENSORLG00015018598	si:ch211-117n7.8	84	56.372	ENSECAG00000013865	SRBD1	83	56.372	Equus_caballus
ENSORLG00015018598	si:ch211-117n7.8	99	62.286	ENSELUG00000012592	si:ch211-117n7.8	99	63.098	Esox_lucius
ENSORLG00015018598	si:ch211-117n7.8	84	56.372	ENSFCAG00000005101	SRBD1	85	56.372	Felis_catus
ENSORLG00015018598	si:ch211-117n7.8	82	57.770	ENSFALG00000012966	SRBD1	97	52.004	Ficedula_albicollis
ENSORLG00015018598	si:ch211-117n7.8	84	56.810	ENSFDAG00000016670	SRBD1	87	56.810	Fukomys_damarensis
ENSORLG00015018598	si:ch211-117n7.8	100	75.634	ENSFHEG00000019480	si:ch211-117n7.8	100	75.634	Fundulus_heteroclitus
ENSORLG00015018598	si:ch211-117n7.8	83	58.237	ENSGALG00000009990	SRBD1	96	54.318	Gallus_gallus
ENSORLG00015018598	si:ch211-117n7.8	100	75.342	ENSGAFG00000019664	si:ch211-117n7.8	100	75.734	Gambusia_affinis
ENSORLG00015018598	si:ch211-117n7.8	61	79.160	ENSGACG00000010794	si:ch211-117n7.8	100	79.160	Gasterosteus_aculeatus
ENSORLG00015018598	si:ch211-117n7.8	82	58.186	ENSGAGG00000006166	SRBD1	99	58.186	Gopherus_agassizii
ENSORLG00015018598	si:ch211-117n7.8	84	55.795	ENSGGOG00000005910	SRBD1	89	55.795	Gorilla_gorilla
ENSORLG00015018598	si:ch211-117n7.8	97	64.516	ENSHBUG00000013207	si:ch211-117n7.8	100	64.819	Haplochromis_burtoni
ENSORLG00015018598	si:ch211-117n7.8	99	50.977	ENSHGLG00000018153	-	99	50.977	Heterocephalus_glaber_female
ENSORLG00015018598	si:ch211-117n7.8	99	50.879	ENSHGLG00100015183	-	99	50.879	Heterocephalus_glaber_male
ENSORLG00015018598	si:ch211-117n7.8	87	67.119	ENSIPUG00000009661	srbd1	100	62.353	Ictalurus_punctatus
ENSORLG00015018598	si:ch211-117n7.8	84	57.425	ENSSTOG00000005898	SRBD1	85	57.425	Ictidomys_tridecemlineatus
ENSORLG00015018598	si:ch211-117n7.8	97	49.800	ENSJJAG00000022244	Srbd1	97	49.800	Jaculus_jaculus
ENSORLG00015018598	si:ch211-117n7.8	99	75.980	ENSKMAG00000003473	si:ch211-117n7.8	100	75.980	Kryptolebias_marmoratus
ENSORLG00015018598	si:ch211-117n7.8	100	75.415	ENSLBEG00000027518	si:ch211-117n7.8	100	75.415	Labrus_bergylta
ENSORLG00015018598	si:ch211-117n7.8	82	58.872	ENSLACG00000009790	SRBD1	98	58.872	Latimeria_chalumnae
ENSORLG00015018598	si:ch211-117n7.8	92	63.474	ENSLOCG00000016360	si:ch211-117n7.8	99	60.407	Lepisosteus_oculatus
ENSORLG00015018598	si:ch211-117n7.8	84	55.785	ENSMFAG00000042026	SRBD1	86	55.785	Macaca_fascicularis
ENSORLG00015018598	si:ch211-117n7.8	84	55.785	ENSMMUG00000003490	SRBD1	86	55.785	Macaca_mulatta
ENSORLG00015018598	si:ch211-117n7.8	84	54.181	ENSMNEG00000034701	SRBD1	86	54.181	Macaca_nemestrina
ENSORLG00015018598	si:ch211-117n7.8	84	55.899	ENSMLEG00000000745	SRBD1	86	55.899	Mandrillus_leucophaeus
ENSORLG00015018598	si:ch211-117n7.8	100	73.412	ENSMAMG00000021921	si:ch211-117n7.8	100	73.998	Mastacembelus_armatus
ENSORLG00015018598	si:ch211-117n7.8	100	77.388	ENSMZEG00005027369	si:ch211-117n7.8	100	77.388	Maylandia_zebra
ENSORLG00015018598	si:ch211-117n7.8	78	56.064	ENSMGAG00000010273	SRBD1	99	56.064	Meleagris_gallopavo
ENSORLG00015018598	si:ch211-117n7.8	76	56.281	ENSMAUG00000013916	Srbd1	95	56.527	Mesocricetus_auratus
ENSORLG00015018598	si:ch211-117n7.8	84	57.011	ENSMICG00000007835	SRBD1	98	52.170	Microcebus_murinus
ENSORLG00015018598	si:ch211-117n7.8	98	51.229	ENSMOCG00000018716	Srbd1	98	51.229	Microtus_ochrogaster
ENSORLG00015018598	si:ch211-117n7.8	97	72.020	ENSMMOG00000007507	si:ch211-117n7.8	100	72.020	Mola_mola
ENSORLG00015018598	si:ch211-117n7.8	100	74.319	ENSMALG00000001562	si:ch211-117n7.8	100	74.514	Monopterus_albus
ENSORLG00015018598	si:ch211-117n7.8	84	55.814	MGP_CAROLIEiJ_G0021934	Srbd1	99	58.632	Mus_caroli
ENSORLG00015018598	si:ch211-117n7.8	84	55.776	ENSMUSG00000024135	Srbd1	96	55.970	Mus_musculus
ENSORLG00015018598	si:ch211-117n7.8	97	50.446	MGP_PahariEiJ_G0020924	Srbd1	98	50.446	Mus_pahari
ENSORLG00015018598	si:ch211-117n7.8	84	55.814	MGP_SPRETEiJ_G0022850	Srbd1	85	55.814	Mus_spretus
ENSORLG00015018598	si:ch211-117n7.8	84	56.602	ENSMLUG00000007039	SRBD1	85	56.602	Myotis_lucifugus
ENSORLG00015018598	si:ch211-117n7.8	97	50.145	ENSNGAG00000011893	Srbd1	98	50.145	Nannospalax_galili
ENSORLG00015018598	si:ch211-117n7.8	98	73.974	ENSNBRG00000012873	si:ch211-117n7.8	100	73.974	Neolamprologus_brichardi
ENSORLG00015018598	si:ch211-117n7.8	84	55.899	ENSNLEG00000016877	SRBD1	86	55.899	Nomascus_leucogenys
ENSORLG00015018598	si:ch211-117n7.8	84	55.749	ENSODEG00000012095	SRBD1	86	55.749	Octodon_degus
ENSORLG00015018598	si:ch211-117n7.8	100	77.583	ENSONIG00000000945	si:ch211-117n7.8	100	82.235	Oreochromis_niloticus
ENSORLG00015018598	si:ch211-117n7.8	84	56.078	ENSOCUG00000015385	SRBD1	85	56.487	Oryctolagus_cuniculus
ENSORLG00015018598	si:ch211-117n7.8	100	94.603	ENSORLG00000004427	si:ch211-117n7.8	100	94.603	Oryzias_latipes
ENSORLG00015018598	si:ch211-117n7.8	100	98.529	ENSORLG00020012792	si:ch211-117n7.8	100	98.529	Oryzias_latipes_hni
ENSORLG00015018598	si:ch211-117n7.8	99	87.303	ENSOMEG00000012229	si:ch211-117n7.8	99	89.394	Oryzias_melastigma
ENSORLG00015018598	si:ch211-117n7.8	82	55.047	ENSOGAG00000001076	SRBD1	98	50.099	Otolemur_garnettii
ENSORLG00015018598	si:ch211-117n7.8	84	52.759	ENSOARG00000005958	SRBD1	99	48.318	Ovis_aries
ENSORLG00015018598	si:ch211-117n7.8	82	56.773	ENSPPAG00000038442	SRBD1	86	56.014	Pan_paniscus
ENSORLG00015018598	si:ch211-117n7.8	84	56.207	ENSPPRG00000003449	SRBD1	85	56.207	Panthera_pardus
ENSORLG00015018598	si:ch211-117n7.8	84	56.207	ENSPTIG00000012495	SRBD1	85	56.207	Panthera_tigris_altaica
ENSORLG00015018598	si:ch211-117n7.8	82	56.890	ENSPTRG00000011889	SRBD1	86	56.128	Pan_troglodytes
ENSORLG00015018598	si:ch211-117n7.8	84	55.785	ENSPANG00000008063	SRBD1	86	55.785	Papio_anubis
ENSORLG00015018598	si:ch211-117n7.8	93	64.614	ENSPKIG00000021973	si:ch211-117n7.8	99	61.831	Paramormyrops_kingsleyae
ENSORLG00015018598	si:ch211-117n7.8	85	56.502	ENSPSIG00000008992	SRBD1	99	51.927	Pelodiscus_sinensis
ENSORLG00015018598	si:ch211-117n7.8	98	67.638	ENSPMGG00000013348	si:ch211-117n7.8	99	69.177	Periophthalmus_magnuspinnatus
ENSORLG00015018598	si:ch211-117n7.8	98	50.339	ENSPEMG00000020684	Srbd1	98	50.339	Peromyscus_maniculatus_bairdii
ENSORLG00015018598	si:ch211-117n7.8	100	76.223	ENSPFOG00000010650	si:ch211-117n7.8	100	76.223	Poecilia_formosa
ENSORLG00015018598	si:ch211-117n7.8	100	76.321	ENSPLAG00000002141	si:ch211-117n7.8	100	76.321	Poecilia_latipinna
ENSORLG00015018598	si:ch211-117n7.8	100	76.419	ENSPMEG00000018537	si:ch211-117n7.8	100	76.419	Poecilia_mexicana
ENSORLG00015018598	si:ch211-117n7.8	100	73.951	ENSPREG00000003258	si:ch211-117n7.8	100	73.951	Poecilia_reticulata
ENSORLG00015018598	si:ch211-117n7.8	82	52.695	ENSPPYG00000012444	SRBD1	83	52.585	Pongo_abelii
ENSORLG00015018598	si:ch211-117n7.8	74	51.847	ENSPCAG00000005629	SRBD1	80	51.847	Procavia_capensis
ENSORLG00015018598	si:ch211-117n7.8	84	47.945	ENSPCOG00000017669	SRBD1	84	48.119	Propithecus_coquereli
ENSORLG00015018598	si:ch211-117n7.8	84	49.139	ENSPVAG00000001782	SRBD1	85	49.139	Pteropus_vampyrus
ENSORLG00015018598	si:ch211-117n7.8	97	71.790	ENSPNYG00000000508	si:ch211-117n7.8	99	71.790	Pundamilia_nyererei
ENSORLG00015018598	si:ch211-117n7.8	94	65.181	ENSPNAG00000013492	SRBD1	100	62.829	Pygocentrus_nattereri
ENSORLG00015018598	si:ch211-117n7.8	84	55.401	ENSRNOG00000014720	Srbd1	85	55.401	Rattus_norvegicus
ENSORLG00015018598	si:ch211-117n7.8	84	55.568	ENSRBIG00000033486	SRBD1	86	55.568	Rhinopithecus_bieti
ENSORLG00015018598	si:ch211-117n7.8	84	55.568	ENSRROG00000041599	SRBD1	86	55.568	Rhinopithecus_roxellana
ENSORLG00015018598	si:ch211-117n7.8	82	56.706	ENSSBOG00000024982	SRBD1	83	56.706	Saimiri_boliviensis_boliviensis
ENSORLG00015018598	si:ch211-117n7.8	85	65.327	ENSSFOG00015001128	si:ch211-117n7.8	94	65.327	Scleropages_formosus
ENSORLG00015018598	si:ch211-117n7.8	100	73.981	ENSSMAG00000018256	si:ch211-117n7.8	100	73.981	Scophthalmus_maximus
ENSORLG00015018598	si:ch211-117n7.8	93	76.471	ENSSLDG00000023189	si:ch211-117n7.8	100	75.123	Seriola_lalandi_dorsalis
ENSORLG00015018598	si:ch211-117n7.8	93	48.394	ENSSARG00000009740	SRBD1	99	47.316	Sorex_araneus
ENSORLG00015018598	si:ch211-117n7.8	83	58.775	ENSSPUG00000010475	SRBD1	94	58.775	Sphenodon_punctatus
ENSORLG00015018598	si:ch211-117n7.8	92	76.008	ENSSPAG00000008092	-	100	72.593	Stegastes_partitus
ENSORLG00015018598	si:ch211-117n7.8	99	50.580	ENSSSCG00000008445	SRBD1	98	51.064	Sus_scrofa
ENSORLG00015018598	si:ch211-117n7.8	81	57.547	ENSTGUG00000003878	SRBD1	99	57.701	Taeniopygia_guttata
ENSORLG00015018598	si:ch211-117n7.8	99	70.388	ENSTRUG00000007080	si:ch211-117n7.8	98	76.357	Takifugu_rubripes
ENSORLG00015018598	si:ch211-117n7.8	97	69.643	ENSTNIG00000007464	si:ch211-117n7.8	98	69.643	Tetraodon_nigroviridis
ENSORLG00015018598	si:ch211-117n7.8	56	78.723	ENSTBEG00000004556	SRBD1	69	78.723	Tupaia_belangeri
ENSORLG00015018598	si:ch211-117n7.8	76	57.774	ENSTTRG00000011871	SRBD1	93	54.762	Tursiops_truncatus
ENSORLG00015018598	si:ch211-117n7.8	85	56.059	ENSUAMG00000008126	SRBD1	97	55.072	Ursus_americanus
ENSORLG00015018598	si:ch211-117n7.8	85	56.172	ENSUMAG00000012902	SRBD1	98	50.969	Ursus_maritimus
ENSORLG00015018598	si:ch211-117n7.8	82	56.537	ENSVPAG00000006825	SRBD1	91	56.537	Vicugna_pacos
ENSORLG00015018598	si:ch211-117n7.8	84	56.372	ENSVVUG00000005389	SRBD1	99	50.678	Vulpes_vulpes
ENSORLG00015018598	si:ch211-117n7.8	98	45.118	ENSXETG00000002760	srbd1	98	44.759	Xenopus_tropicalis
ENSORLG00015018598	si:ch211-117n7.8	100	75.538	ENSXMAG00000016861	si:ch211-117n7.8	100	75.538	Xiphophorus_maculatus