EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015018640 (Gene tree)
Gene ID: -
Gene Symbol: blm
Alias: -
Full Name: Oryzias latipes BLM RecQ like helicase (blm)%2C mRNA.
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 9710 bases
Position: chr6:19303560-19313269
Accession: NM_001104650
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015033109	HRDC	PF00570.23	5.5e-15	1	1
ENSORLP00015033120	HRDC	PF00570.23	8.4e-15	1	1
ENSORLP00015017393	HRDC	PF00570.23	8.5e-15	1	1
ENSORLP00015033195	HRDC	PF00570.23	8.7e-15	1	1
ENSORLP00015017393	BDHCT	PF08072.11	2e-19	1	1
ENSORLP00015033195	BDHCT	PF08072.11	2e-19	1	1
ENSORLP00015033120	BDHCT	PF08072.11	2.1e-19	1	1
ENSORLP00015033109	BDHCT	PF08072.11	4.8e-15	1	1
ENSORLP00015033109	DEAD	PF00270.29	1.6e-17	1	1
ENSORLP00015017393	DEAD	PF00270.29	3.2e-17	1	1
ENSORLP00015033195	DEAD	PF00270.29	3.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015034732	-	4600	-	ENSORLP00015033195	1393 (aa)	-	-
ENSORLT00015034688	-	4104	-	ENSORLP00015033120	1367 (aa)	-	-
ENSORLT00015034722	-	4510	XM_023955368	ENSORLP00015017393	1363 (aa)	XP_023811136	-
ENSORLT00015025711	-	2928	-	ENSORLP00015033109	975 (aa)	-	-

Gene Model

Click here to download ENSORLG00015018640's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015018640's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015018640	blm	54	39.439	ENSORLG00015018708	recql	81	39.130

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015018640	blm	78	66.496	ENSG00000197299	BLM	82	70.293	Homo_sapiens
ENSORLG00015018640	blm	100	74.474	ENSAPOG00000017966	blm	100	73.736	Acanthochromis_polyacanthus
ENSORLG00015018640	blm	78	65.306	ENSAMEG00000013843	BLM	55	65.394	Ailuropoda_melanoleuca
ENSORLG00015018640	blm	99	76.190	ENSACIG00000023762	blm	100	72.914	Amphilophus_citrinellus
ENSORLG00015018640	blm	100	74.332	ENSAOCG00000003318	blm	100	73.654	Amphiprion_ocellaris
ENSORLG00015018640	blm	100	74.141	ENSAPEG00000018105	blm	100	73.366	Amphiprion_percula
ENSORLG00015018640	blm	99	76.482	ENSATEG00000006421	blm	100	73.558	Anabas_testudineus
ENSORLG00015018640	blm	88	59.215	ENSAPLG00000006878	BLM	97	52.775	Anas_platyrhynchos
ENSORLG00015018640	blm	82	64.619	ENSACAG00000014275	BLM	65	66.624	Anolis_carolinensis
ENSORLG00015018640	blm	78	66.453	ENSANAG00000038415	BLM	63	73.975	Aotus_nancymaae
ENSORLG00015018640	blm	100	77.035	ENSACLG00000020354	blm	100	73.107	Astatotilapia_calliptera
ENSORLG00015018640	blm	99	63.104	ENSAMXG00000016970	blm	99	58.799	Astyanax_mexicanus
ENSORLG00015018640	blm	68	80.000	ENSBTAG00000020301	BLM	86	64.953	Bos_taurus
ENSORLG00015018640	blm	67	39.542	WBGene00001865	him-6	77	37.310	Caenorhabditis_elegans
ENSORLG00015018640	blm	57	67.647	ENSCJAG00000009803	BLM	60	74.180	Callithrix_jacchus
ENSORLG00015018640	blm	78	65.565	ENSCAFG00000012385	BLM	66	65.649	Canis_familiaris
ENSORLG00015018640	blm	78	65.565	ENSCAFG00020016111	BLM	87	68.524	Canis_lupus_dingo
ENSORLG00015018640	blm	79	73.131	ENSCHIG00000010329	BLM	88	63.938	Capra_hircus
ENSORLG00015018640	blm	78	65.776	ENSTSYG00000012368	BLM	51	72.951	Carlito_syrichta
ENSORLG00015018640	blm	72	71.739	ENSCAPG00000017976	BLM	70	70.087	Cavia_aperea
ENSORLG00015018640	blm	99	46.585	ENSCPOG00000001761	BLM	99	46.421	Cavia_porcellus
ENSORLG00015018640	blm	78	66.325	ENSCCAG00000023069	BLM	60	74.180	Cebus_capucinus
ENSORLG00015018640	blm	78	66.624	ENSCATG00000040609	BLM	75	76.721	Cercocebus_atys
ENSORLG00015018640	blm	78	66.242	ENSCLAG00000012111	BLM	80	53.114	Chinchilla_lanigera
ENSORLG00015018640	blm	78	66.368	ENSCSAG00000017040	BLM	64	66.752	Chlorocebus_sabaeus
ENSORLG00015018640	blm	53	78.261	ENSCHOG00000006255	BLM	54	78.261	Choloepus_hoffmanni
ENSORLG00015018640	blm	99	56.413	ENSCPBG00000025000	BLM	94	55.545	Chrysemys_picta_bellii
ENSORLG00015018640	blm	54	39.057	ENSCSAVG00000007521	-	88	38.983	Ciona_savignyi
ENSORLG00015018640	blm	63	50.399	ENSCANG00000034808	BLM	56	52.070	Colobus_angolensis_palliatus
ENSORLG00015018640	blm	78	66.795	ENSCGRG00001024897	Blm	80	53.125	Cricetulus_griseus_chok1gshd
ENSORLG00015018640	blm	99	70.190	ENSCSEG00000013483	blm	99	65.139	Cynoglossus_semilaevis
ENSORLG00015018640	blm	76	76.724	ENSCVAG00000017583	blm	99	70.428	Cyprinodon_variegatus
ENSORLG00015018640	blm	87	81.250	ENSDARG00000077089	blm	100	58.435	Danio_rerio
ENSORLG00015018640	blm	79	65.434	ENSDNOG00000010159	BLM	54	65.944	Dasypus_novemcinctus
ENSORLG00015018640	blm	99	55.725	ENSDORG00000011033	Blm	99	55.787	Dipodomys_ordii
ENSORLG00015018640	blm	66	43.873	FBgn0002906	Blm	54	39.759	Drosophila_melanogaster
ENSORLG00015018640	blm	66	52.227	ENSETEG00000015019	BLM	56	54.348	Echinops_telfairi
ENSORLG00015018640	blm	60	58.685	ENSEBUG00000015743	-	99	52.128	Eptatretus_burgeri
ENSORLG00015018640	blm	78	63.636	ENSEASG00005006727	BLM	72	60.753	Equus_asinus_asinus
ENSORLG00015018640	blm	78	66.453	ENSECAG00000011405	BLM	67	63.701	Equus_caballus
ENSORLG00015018640	blm	79	64.295	ENSEEUG00000001434	BLM	79	52.078	Erinaceus_europaeus
ENSORLG00015018640	blm	99	64.935	ENSELUG00000019098	blm	99	58.947	Esox_lucius
ENSORLG00015018640	blm	78	66.284	ENSFCAG00000006087	BLM	57	73.566	Felis_catus
ENSORLG00015018640	blm	99	54.755	ENSFALG00000010981	BLM	67	63.309	Ficedula_albicollis
ENSORLG00015018640	blm	94	60.183	ENSFDAG00000012658	BLM	77	59.630	Fukomys_damarensis
ENSORLG00015018640	blm	100	75.121	ENSFHEG00000002553	blm	100	73.042	Fundulus_heteroclitus
ENSORLG00015018640	blm	99	65.306	ENSGMOG00000016431	blm	99	69.746	Gadus_morhua
ENSORLG00015018640	blm	99	54.004	ENSGALG00000008256	BLM	100	46.149	Gallus_gallus
ENSORLG00015018640	blm	96	81.081	ENSGAFG00000001117	blm	99	81.081	Gambusia_affinis
ENSORLG00015018640	blm	99	73.730	ENSGACG00000010863	blm	100	89.962	Gasterosteus_aculeatus
ENSORLG00015018640	blm	86	56.718	ENSGAGG00000005383	BLM	95	54.894	Gopherus_agassizii
ENSORLG00015018640	blm	78	66.624	ENSGGOG00000007710	BLM	76	76.221	Gorilla_gorilla
ENSORLG00015018640	blm	100	77.057	ENSHBUG00000015943	blm	100	73.304	Haplochromis_burtoni
ENSORLG00015018640	blm	78	65.399	ENSHGLG00000013231	BLM	67	63.560	Heterocephalus_glaber_female
ENSORLG00015018640	blm	99	71.443	ENSHCOG00000011455	blm	100	71.869	Hippocampus_comes
ENSORLG00015018640	blm	99	66.002	ENSIPUG00000000529	blm	86	64.976	Ictalurus_punctatus
ENSORLG00015018640	blm	78	65.944	ENSSTOG00000005000	BLM	65	66.069	Ictidomys_tridecemlineatus
ENSORLG00015018640	blm	68	78.342	ENSJJAG00000016322	Blm	94	55.673	Jaculus_jaculus
ENSORLG00015018640	blm	100	76.510	ENSKMAG00000016608	blm	100	75.036	Kryptolebias_marmoratus
ENSORLG00015018640	blm	82	79.557	ENSLBEG00000018729	blm	97	79.736	Labrus_bergylta
ENSORLG00015018640	blm	80	68.579	ENSLACG00000006490	BLM	100	48.663	Latimeria_chalumnae
ENSORLG00015018640	blm	99	59.416	ENSLOCG00000014302	blm	100	53.635	Lepisosteus_oculatus
ENSORLG00015018640	blm	78	66.752	ENSMFAG00000042982	BLM	75	77.049	Macaca_fascicularis
ENSORLG00015018640	blm	78	66.752	ENSMMUG00000019526	BLM	75	77.049	Macaca_mulatta
ENSORLG00015018640	blm	78	66.624	ENSMNEG00000031251	BLM	75	76.721	Macaca_nemestrina
ENSORLG00015018640	blm	78	62.868	ENSMLEG00000032934	BLM	63	63.660	Mandrillus_leucophaeus
ENSORLG00015018640	blm	99	75.772	ENSMAMG00000008726	blm	99	72.496	Mastacembelus_armatus
ENSORLG00015018640	blm	100	76.938	ENSMZEG00005022323	blm	100	72.431	Maylandia_zebra
ENSORLG00015018640	blm	59	60.906	ENSMGAG00000010473	BLM	99	62.017	Meleagris_gallopavo
ENSORLG00015018640	blm	78	65.863	ENSMAUG00000008953	Blm	68	63.853	Mesocricetus_auratus
ENSORLG00015018640	blm	78	66.369	ENSMICG00000034442	BLM	60	73.770	Microcebus_murinus
ENSORLG00015018640	blm	87	64.372	ENSMOCG00000016367	Blm	68	65.128	Microtus_ochrogaster
ENSORLG00015018640	blm	100	74.117	ENSMMOG00000006959	blm	100	70.592	Mola_mola
ENSORLG00015018640	blm	79	67.219	ENSMODG00000019449	BLM	62	62.563	Monodelphis_domestica
ENSORLG00015018640	blm	100	74.691	ENSMALG00000007323	blm	100	72.183	Monopterus_albus
ENSORLG00015018640	blm	78	65.557	MGP_CAROLIEiJ_G0029907	Blm	74	63.258	Mus_caroli
ENSORLG00015018640	blm	78	65.729	ENSMUSG00000030528	Blm	74	63.357	Mus_musculus
ENSORLG00015018640	blm	78	66.667	MGP_PahariEiJ_G0013129	Blm	65	63.929	Mus_pahari
ENSORLG00015018640	blm	78	65.854	MGP_SPRETEiJ_G0031009	Blm	74	63.377	Mus_spretus
ENSORLG00015018640	blm	62	65.135	ENSMPUG00000015657	BLM	52	65.293	Mustela_putorius_furo
ENSORLG00015018640	blm	78	65.140	ENSMLUG00000014697	BLM	80	52.373	Myotis_lucifugus
ENSORLG00015018640	blm	87	63.278	ENSNGAG00000001275	Blm	70	63.278	Nannospalax_galili
ENSORLG00015018640	blm	100	76.567	ENSNBRG00000019702	blm	100	73.234	Neolamprologus_brichardi
ENSORLG00015018640	blm	78	63.811	ENSNLEG00000012087	BLM	82	70.082	Nomascus_leucogenys
ENSORLG00015018640	blm	76	63.818	ENSMEUG00000007253	BLM	89	58.412	Notamacropus_eugenii
ENSORLG00015018640	blm	73	66.252	ENSOPRG00000011667	BLM	62	65.655	Ochotona_princeps
ENSORLG00015018640	blm	78	60.969	ENSODEG00000015373	BLM	99	51.887	Octodon_degus
ENSORLG00015018640	blm	100	77.176	ENSONIG00000015193	blm	100	69.820	Oreochromis_niloticus
ENSORLG00015018640	blm	77	65.935	ENSOANG00000009316	-	100	65.935	Ornithorhynchus_anatinus
ENSORLG00015018640	blm	78	65.385	ENSOCUG00000013969	BLM	75	62.057	Oryctolagus_cuniculus
ENSORLG00015018640	blm	100	98.564	ENSORLG00000008110	blm	100	98.564	Oryzias_latipes
ENSORLG00015018640	blm	100	98.421	ENSORLG00020004812	blm	100	98.421	Oryzias_latipes_hni
ENSORLG00015018640	blm	100	90.095	ENSOMEG00000023545	blm	100	90.095	Oryzias_melastigma
ENSORLG00015018640	blm	79	65.223	ENSOGAG00000005708	BLM	64	65.394	Otolemur_garnettii
ENSORLG00015018640	blm	87	64.294	ENSOARG00000012875	BLM	87	64.252	Ovis_aries
ENSORLG00015018640	blm	62	66.411	ENSPPAG00000032173	BLM	83	74.385	Pan_paniscus
ENSORLG00015018640	blm	78	66.156	ENSPPRG00000002471	BLM	60	73.566	Panthera_pardus
ENSORLG00015018640	blm	78	65.517	ENSPTIG00000016168	BLM	59	73.116	Panthera_tigris_altaica
ENSORLG00015018640	blm	62	66.837	ENSPTRG00000007460	BLM	83	73.922	Pan_troglodytes
ENSORLG00015018640	blm	78	66.624	ENSPANG00000018572	BLM	75	77.049	Papio_anubis
ENSORLG00015018640	blm	89	69.941	ENSPKIG00000008954	blm	99	55.994	Paramormyrops_kingsleyae
ENSORLG00015018640	blm	57	71.429	ENSPSIG00000009792	BLM	99	71.532	Pelodiscus_sinensis
ENSORLG00015018640	blm	94	73.922	ENSPMGG00000006629	blm	100	74.353	Periophthalmus_magnuspinnatus
ENSORLG00015018640	blm	78	66.964	ENSPEMG00000017348	Blm	88	63.886	Peromyscus_maniculatus_bairdii
ENSORLG00015018640	blm	71	58.974	ENSPMAG00000000445	blm	94	59.459	Petromyzon_marinus
ENSORLG00015018640	blm	87	63.876	ENSPCIG00000006609	BLM	87	62.674	Phascolarctos_cinereus
ENSORLG00015018640	blm	100	73.821	ENSPFOG00000005059	blm	100	72.786	Poecilia_formosa
ENSORLG00015018640	blm	100	73.796	ENSPLAG00000017344	blm	100	72.839	Poecilia_latipinna
ENSORLG00015018640	blm	100	73.821	ENSPMEG00000000321	blm	100	72.714	Poecilia_mexicana
ENSORLG00015018640	blm	100	72.762	ENSPREG00000007715	blm	100	72.066	Poecilia_reticulata
ENSORLG00015018640	blm	78	65.217	ENSPPYG00000006784	BLM	64	65.732	Pongo_abelii
ENSORLG00015018640	blm	84	60.279	ENSPCAG00000008960	BLM	61	59.931	Procavia_capensis
ENSORLG00015018640	blm	78	58.418	ENSPCOG00000000439	BLM	62	58.344	Propithecus_coquereli
ENSORLG00015018640	blm	72	76.393	ENSPVAG00000011642	BLM	59	76.393	Pteropus_vampyrus
ENSORLG00015018640	blm	88	85.310	ENSPNYG00000010956	blm	100	65.401	Pundamilia_nyererei
ENSORLG00015018640	blm	100	65.446	ENSPNAG00000011714	blm	100	58.402	Pygocentrus_nattereri
ENSORLG00015018640	blm	88	63.377	ENSRNOG00000011213	Blm	68	63.452	Rattus_norvegicus
ENSORLG00015018640	blm	79	66.071	ENSRBIG00000029656	BLM	76	76.547	Rhinopithecus_bieti
ENSORLG00015018640	blm	79	66.071	ENSRROG00000037871	BLM	76	76.547	Rhinopithecus_roxellana
ENSORLG00015018640	blm	65	73.770	ENSSBOG00000030957	BLM	60	73.770	Saimiri_boliviensis_boliviensis
ENSORLG00015018640	blm	88	63.337	ENSSHAG00000007988	BLM	87	63.435	Sarcophilus_harrisii
ENSORLG00015018640	blm	99	66.568	ENSSFOG00015015462	blm	75	73.467	Scleropages_formosus
ENSORLG00015018640	blm	100	74.571	ENSSMAG00000001120	blm	100	72.330	Scophthalmus_maximus
ENSORLG00015018640	blm	100	75.214	ENSSDUG00000010955	blm	100	72.831	Seriola_dumerili
ENSORLG00015018640	blm	100	75.477	ENSSLDG00000000634	blm	100	73.233	Seriola_lalandi_dorsalis
ENSORLG00015018640	blm	79	61.175	ENSSARG00000006398	BLM	67	58.442	Sorex_araneus
ENSORLG00015018640	blm	85	59.589	ENSSPUG00000000013	BLM	97	52.102	Sphenodon_punctatus
ENSORLG00015018640	blm	99	76.104	ENSSPAG00000013999	blm	99	74.507	Stegastes_partitus
ENSORLG00015018640	blm	87	63.744	ENSSSCG00000001816	BLM	86	66.365	Sus_scrofa
ENSORLG00015018640	blm	99	48.269	ENSTGUG00000009959	-	99	46.592	Taeniopygia_guttata
ENSORLG00015018640	blm	99	70.977	ENSTRUG00000019860	blm	99	68.303	Takifugu_rubripes
ENSORLG00015018640	blm	99	71.526	ENSTNIG00000019246	blm	99	65.368	Tetraodon_nigroviridis
ENSORLG00015018640	blm	78	66.582	ENSTTRG00000016386	BLM	80	53.190	Tursiops_truncatus
ENSORLG00015018640	blm	84	65.561	ENSUMAG00000009105	BLM	95	68.619	Ursus_maritimus
ENSORLG00015018640	blm	78	63.010	ENSVPAG00000000085	BLM	69	62.817	Vicugna_pacos
ENSORLG00015018640	blm	68	77.838	ENSVVUG00000006402	BLM	62	78.049	Vulpes_vulpes
ENSORLG00015018640	blm	88	61.676	ENSXETG00000007847	blm	55	67.178	Xenopus_tropicalis
ENSORLG00015018640	blm	100	71.319	ENSXCOG00000020227	blm	100	70.763	Xiphophorus_couchianus
ENSORLG00015018640	blm	100	73.679	ENSXMAG00000002951	blm	100	72.586	Xiphophorus_maculatus