EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015018830 (Gene tree)
Gene ID: -
Gene Symbol: sall1a
Alias: -
Full Name: spalt-like transcription factor 1a
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 11553 bases
Position: chr3:29818909-29830461
Accession: ZDB-GENE-020228-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015017791	zf-C2H2	PF00096.26	4.5e-37	1	7
ENSORLP00015017791	zf-C2H2	PF00096.26	4.5e-37	2	7
ENSORLP00015017791	zf-C2H2	PF00096.26	4.5e-37	3	7
ENSORLP00015017791	zf-C2H2	PF00096.26	4.5e-37	4	7
ENSORLP00015017791	zf-C2H2	PF00096.26	4.5e-37	5	7
ENSORLP00015017791	zf-C2H2	PF00096.26	4.5e-37	6	7
ENSORLP00015017791	zf-C2H2	PF00096.26	4.5e-37	7	7
ENSORLP00015017787	zf-C2H2	PF00096.26	5.4e-34	1	7
ENSORLP00015017787	zf-C2H2	PF00096.26	5.4e-34	2	7
ENSORLP00015017787	zf-C2H2	PF00096.26	5.4e-34	3	7
ENSORLP00015017787	zf-C2H2	PF00096.26	5.4e-34	4	7
ENSORLP00015017787	zf-C2H2	PF00096.26	5.4e-34	5	7
ENSORLP00015017787	zf-C2H2	PF00096.26	5.4e-34	6	7
ENSORLP00015017787	zf-C2H2	PF00096.26	5.4e-34	7	7
ENSORLP00015017791	zf-met	PF12874.7	4.5e-24	1	5
ENSORLP00015017791	zf-met	PF12874.7	4.5e-24	2	5
ENSORLP00015017791	zf-met	PF12874.7	4.5e-24	3	5
ENSORLP00015017791	zf-met	PF12874.7	4.5e-24	4	5
ENSORLP00015017791	zf-met	PF12874.7	4.5e-24	5	5
ENSORLP00015017787	zf-met	PF12874.7	9.6e-24	1	5
ENSORLP00015017787	zf-met	PF12874.7	9.6e-24	2	5
ENSORLP00015017787	zf-met	PF12874.7	9.6e-24	3	5
ENSORLP00015017787	zf-met	PF12874.7	9.6e-24	4	5
ENSORLP00015017787	zf-met	PF12874.7	9.6e-24	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015026319	-	5723	-	ENSORLP00015017791	1184 (aa)	-	-
ENSORLT00015026331	-	5612	-	ENSORLP00015017787	1305 (aa)	-	-

Gene Model

Click here to download ENSORLG00015018830's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015018830's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015018830	sall1a	99	65.385	ENSORLG00015002265	sall4	99	65.385
ENSORLG00015018830	sall1a	79	72.973	ENSORLG00015018152	sall3a	91	72.973
ENSORLG00015018830	sall1a	52	47.273	ENSORLG00015014823	-	94	48.077
ENSORLG00015018830	sall1a	51	47.059	ENSORLG00015007920	-	95	52.941
ENSORLG00015018830	sall1a	50	39.326	ENSORLG00015012187	-	93	42.529
ENSORLG00015018830	sall1a	62	40.964	ENSORLG00015012776	-	99	47.273
ENSORLG00015018830	sall1a	69	48.980	ENSORLG00015011730	-	92	48.980
ENSORLG00015018830	sall1a	58	50.980	ENSORLG00015016741	-	96	48.980
ENSORLG00015018830	sall1a	87	65.333	ENSORLG00015005877	sall3b	93	65.333
ENSORLG00015018830	sall1a	50	57.143	ENSORLG00015018340	znf236	81	53.061

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015018830	sall1a	99	67.684	ENSG00000103449	SALL1	100	67.711	Homo_sapiens
ENSORLG00015018830	sall1a	100	92.314	ENSAPOG00000022764	sall1a	100	91.737	Acanthochromis_polyacanthus
ENSORLG00015018830	sall1a	97	68.977	ENSAMEG00000006817	SALL1	100	66.617	Ailuropoda_melanoleuca
ENSORLG00015018830	sall1a	100	90.794	ENSACIG00000004231	sall1a	100	90.360	Amphilophus_citrinellus
ENSORLG00015018830	sall1a	100	92.652	ENSAOCG00000002800	sall1a	100	92.043	Amphiprion_ocellaris
ENSORLG00015018830	sall1a	100	92.399	ENSAPEG00000010179	sall1a	100	91.737	Amphiprion_percula
ENSORLG00015018830	sall1a	99	90.871	ENSATEG00000003006	sall1a	100	90.339	Anabas_testudineus
ENSORLG00015018830	sall1a	100	69.167	ENSAPLG00000003356	SALL1	100	69.219	Anas_platyrhynchos
ENSORLG00015018830	sall1a	99	68.650	ENSACAG00000014399	SALL1	97	66.995	Anolis_carolinensis
ENSORLG00015018830	sall1a	99	67.636	ENSANAG00000027238	SALL1	100	68.009	Aotus_nancymaae
ENSORLG00015018830	sall1a	100	91.132	ENSACLG00000017148	sall1a	100	90.669	Astatotilapia_calliptera
ENSORLG00015018830	sall1a	99	51.067	ENSAMXG00000017702	sall1b	99	51.320	Astyanax_mexicanus
ENSORLG00015018830	sall1a	100	80.185	ENSAMXG00000018599	sall1a	100	79.909	Astyanax_mexicanus
ENSORLG00015018830	sall1a	100	67.386	ENSBTAG00000008544	SALL1	100	67.362	Bos_taurus
ENSORLG00015018830	sall1a	99	67.934	ENSCJAG00000001740	SALL1	100	68.233	Callithrix_jacchus
ENSORLG00015018830	sall1a	99	66.692	ENSCAFG00000009755	SALL1	100	67.214	Canis_familiaris
ENSORLG00015018830	sall1a	99	66.692	ENSCAFG00020002842	SALL1	100	67.214	Canis_lupus_dingo
ENSORLG00015018830	sall1a	100	66.815	ENSCHIG00000026074	SALL1	100	66.889	Capra_hircus
ENSORLG00015018830	sall1a	99	68.023	ENSTSYG00000029464	SALL1	100	67.937	Carlito_syrichta
ENSORLG00015018830	sall1a	97	69.133	ENSCPOG00000006564	SALL1	99	67.565	Cavia_porcellus
ENSORLG00015018830	sall1a	99	65.996	ENSCCAG00000001639	SALL1	100	66.294	Cebus_capucinus
ENSORLG00015018830	sall1a	99	67.860	ENSCATG00000004982	SALL1	100	68.084	Cercocebus_atys
ENSORLG00015018830	sall1a	97	68.776	ENSCLAG00000006380	SALL1	100	66.815	Chinchilla_lanigera
ENSORLG00015018830	sall1a	99	67.263	ENSCSAG00000005319	SALL1	100	67.412	Chlorocebus_sabaeus
ENSORLG00015018830	sall1a	65	70.909	ENSCHOG00000000800	-	69	66.667	Choloepus_hoffmanni
ENSORLG00015018830	sall1a	100	68.816	ENSCPBG00000015924	SALL1	100	69.017	Chrysemys_picta_bellii
ENSORLG00015018830	sall1a	99	68.084	ENSCANG00000036664	SALL1	100	68.111	Colobus_angolensis_palliatus
ENSORLG00015018830	sall1a	98	68.403	ENSCGRG00001023314	-	100	66.916	Cricetulus_griseus_chok1gshd
ENSORLG00015018830	sall1a	98	68.403	ENSCGRG00000009496	Sall1	100	66.870	Cricetulus_griseus_crigri
ENSORLG00015018830	sall1a	99	88.964	ENSCSEG00000009349	sall1a	99	88.015	Cynoglossus_semilaevis
ENSORLG00015018830	sall1a	90	89.338	ENSCVAG00000020513	sall1a	99	89.338	Cyprinodon_variegatus
ENSORLG00015018830	sall1a	100	78.894	ENSDARG00000074319	sall1a	100	77.677	Danio_rerio
ENSORLG00015018830	sall1a	99	47.666	ENSDARG00000075891	sall1b	99	46.592	Danio_rerio
ENSORLG00015018830	sall1a	98	69.715	ENSDNOG00000016413	SALL1	100	68.111	Dasypus_novemcinctus
ENSORLG00015018830	sall1a	97	69.676	ENSETEG00000015150	SALL1	99	67.483	Echinops_telfairi
ENSORLG00015018830	sall1a	90	65.385	ENSEBUG00000011732	SALL1	97	65.385	Eptatretus_burgeri
ENSORLG00015018830	sall1a	69	42.558	ENSEBUG00000008798	SALL1	96	36.466	Eptatretus_burgeri
ENSORLG00015018830	sall1a	96	70.077	ENSEASG00005014602	SALL1	100	67.740	Equus_asinus_asinus
ENSORLG00015018830	sall1a	90	65.045	ENSECAG00000011334	SALL1	99	65.759	Equus_caballus
ENSORLG00015018830	sall1a	96	70.361	ENSEEUG00000002014	SALL1	100	67.658	Erinaceus_europaeus
ENSORLG00015018830	sall1a	100	77.050	ENSELUG00000006159	sall1a	100	76.940	Esox_lucius
ENSORLG00015018830	sall1a	100	54.296	ENSELUG00000017774	-	100	54.836	Esox_lucius
ENSORLG00015018830	sall1a	100	65.870	ENSFCAG00000024654	SALL1	100	66.542	Felis_catus
ENSORLG00015018830	sall1a	100	69.271	ENSFALG00000000074	SALL1	100	69.023	Ficedula_albicollis
ENSORLG00015018830	sall1a	79	65.854	ENSFHEG00000008424	-	100	63.265	Fundulus_heteroclitus
ENSORLG00015018830	sall1a	100	91.301	ENSFHEG00000012579	sall1a	100	90.436	Fundulus_heteroclitus
ENSORLG00015018830	sall1a	97	40.984	ENSGMOG00000013383	-	99	40.730	Gadus_morhua
ENSORLG00015018830	sall1a	100	82.843	ENSGMOG00000006103	sall1a	100	82.393	Gadus_morhua
ENSORLG00015018830	sall1a	100	69.595	ENSGALG00000039238	SALL1	100	69.444	Gallus_gallus
ENSORLG00015018830	sall1a	100	91.231	ENSGAFG00000009964	sall1a	100	90.527	Gambusia_affinis
ENSORLG00015018830	sall1a	99	89.265	ENSGACG00000016702	sall1a	99	88.515	Gasterosteus_aculeatus
ENSORLG00015018830	sall1a	100	68.891	ENSGAGG00000013979	SALL1	100	69.092	Gopherus_agassizii
ENSORLG00015018830	sall1a	99	67.908	ENSGGOG00000000663	SALL1	100	67.934	Gorilla_gorilla
ENSORLG00015018830	sall1a	100	91.047	ENSHBUG00000022005	sall1a	100	90.589	Haplochromis_burtoni
ENSORLG00015018830	sall1a	97	69.036	ENSHGLG00000004288	-	100	67.836	Heterocephalus_glaber_female
ENSORLG00015018830	sall1a	97	69.036	ENSHGLG00100017496	SALL1	100	67.836	Heterocephalus_glaber_male
ENSORLG00015018830	sall1a	100	83.820	ENSHCOG00000000974	sall1a	100	83.283	Hippocampus_comes
ENSORLG00015018830	sall1a	100	79.681	ENSIPUG00000016265	SALL1	100	78.370	Ictalurus_punctatus
ENSORLG00015018830	sall1a	97	52.532	ENSIPUG00000022928	sall1b	99	50.226	Ictalurus_punctatus
ENSORLG00015018830	sall1a	99	68.127	ENSSTOG00000020885	SALL1	100	68.202	Ictidomys_tridecemlineatus
ENSORLG00015018830	sall1a	100	91.723	ENSKMAG00000016681	sall1a	100	90.819	Kryptolebias_marmoratus
ENSORLG00015018830	sall1a	99	88.608	ENSLBEG00000012207	sall1a	95	87.862	Labrus_bergylta
ENSORLG00015018830	sall1a	100	68.740	ENSLACG00000003556	SALL1	100	68.774	Latimeria_chalumnae
ENSORLG00015018830	sall1a	60	40.868	ENSLACG00000014018	-	99	38.766	Latimeria_chalumnae
ENSORLG00015018830	sall1a	100	77.333	ENSLOCG00000007283	sall1b	100	77.098	Lepisosteus_oculatus
ENSORLG00015018830	sall1a	97	70.017	ENSLAFG00000015251	SALL1	100	67.727	Loxodonta_africana
ENSORLG00015018830	sall1a	99	67.958	ENSMFAG00000003298	SALL1	100	68.084	Macaca_fascicularis
ENSORLG00015018830	sall1a	96	69.991	ENSMMUG00000017200	SALL1	99	68.167	Macaca_mulatta
ENSORLG00015018830	sall1a	96	69.991	ENSMNEG00000034770	SALL1	99	68.087	Macaca_nemestrina
ENSORLG00015018830	sall1a	99	68.084	ENSMLEG00000036406	SALL1	100	68.084	Mandrillus_leucophaeus
ENSORLG00015018830	sall1a	99	91.470	ENSMAMG00000004164	sall1a	99	91.082	Mastacembelus_armatus
ENSORLG00015018830	sall1a	100	91.132	ENSMZEG00005006479	sall1a	100	90.669	Maylandia_zebra
ENSORLG00015018830	sall1a	97	71.490	ENSMGAG00000004704	SALL1	100	69.166	Meleagris_gallopavo
ENSORLG00015018830	sall1a	100	66.493	ENSMAUG00000019093	Sall1	100	66.642	Mesocricetus_auratus
ENSORLG00015018830	sall1a	100	67.341	ENSMICG00000036486	SALL1	100	67.391	Microcebus_murinus
ENSORLG00015018830	sall1a	99	90.110	ENSMMOG00000016400	sall1a	99	89.510	Mola_mola
ENSORLG00015018830	sall1a	97	70.623	ENSMODG00000013114	SALL1	99	68.464	Monodelphis_domestica
ENSORLG00015018830	sall1a	99	90.871	ENSMALG00000013400	sall1a	99	90.123	Monopterus_albus
ENSORLG00015018830	sall1a	100	66.617	MGP_CAROLIEiJ_G0031362	Sall1	100	66.691	Mus_caroli
ENSORLG00015018830	sall1a	100	66.346	ENSMUSG00000031665	Sall1	100	66.543	Mus_musculus
ENSORLG00015018830	sall1a	98	68.117	MGP_PahariEiJ_G0022961	Sall1	100	66.296	Mus_pahari
ENSORLG00015018830	sall1a	100	66.346	MGP_SPRETEiJ_G0032480	Sall1	100	66.543	Mus_spretus
ENSORLG00015018830	sall1a	97	68.904	ENSMPUG00000003265	SALL1	96	66.261	Mustela_putorius_furo
ENSORLG00015018830	sall1a	96	67.830	ENSMLUG00000015541	SALL1	99	65.701	Myotis_lucifugus
ENSORLG00015018830	sall1a	100	91.385	ENSNBRG00000009307	sall1a	100	90.834	Neolamprologus_brichardi
ENSORLG00015018830	sall1a	93	81.564	ENSNLEG00000001008	SALL1	99	81.111	Nomascus_leucogenys
ENSORLG00015018830	sall1a	99	68.357	ENSMEUG00000012206	SALL1	99	68.243	Notamacropus_eugenii
ENSORLG00015018830	sall1a	84	75.410	ENSOPRG00000005645	SALL1	71	72.165	Ochotona_princeps
ENSORLG00015018830	sall1a	97	69.329	ENSODEG00000003685	SALL1	100	67.566	Octodon_degus
ENSORLG00015018830	sall1a	100	91.470	ENSONIG00000002831	sall1a	100	90.972	Oreochromis_niloticus
ENSORLG00015018830	sall1a	96	63.722	ENSOANG00000013399	SALL1	96	77.551	Ornithorhynchus_anatinus
ENSORLG00015018830	sall1a	100	99.578	ENSORLG00000013827	sall1a	100	99.578	Oryzias_latipes
ENSORLG00015018830	sall1a	100	99.493	ENSORLG00020020570	sall1a	100	99.464	Oryzias_latipes_hni
ENSORLG00015018830	sall1a	100	97.635	ENSOMEG00000016043	sall1a	100	97.110	Oryzias_melastigma
ENSORLG00015018830	sall1a	100	67.785	ENSOGAG00000027316	SALL1	100	67.937	Otolemur_garnettii
ENSORLG00015018830	sall1a	100	63.528	ENSOARG00000017583	SALL1	100	63.291	Ovis_aries
ENSORLG00015018830	sall1a	98	67.957	ENSPPAG00000035657	SALL1	100	67.985	Pan_paniscus
ENSORLG00015018830	sall1a	99	50.226	ENSPPAG00000035136	-	99	50.604	Pan_paniscus
ENSORLG00015018830	sall1a	100	65.945	ENSPPRG00000023283	SALL1	100	66.828	Panthera_pardus
ENSORLG00015018830	sall1a	87	70.677	ENSPTIG00000013539	-	94	70.888	Panthera_tigris_altaica
ENSORLG00015018830	sall1a	99	67.732	ENSPTRG00000008108	SALL1	100	67.934	Pan_troglodytes
ENSORLG00015018830	sall1a	98	50.421	ENSPTRG00000045256	-	99	50.807	Pan_troglodytes
ENSORLG00015018830	sall1a	99	68.009	ENSPANG00000024176	SALL1	100	68.009	Papio_anubis
ENSORLG00015018830	sall1a	100	70.182	ENSPKIG00000005383	-	100	70.272	Paramormyrops_kingsleyae
ENSORLG00015018830	sall1a	100	72.560	ENSPKIG00000022251	sall1a	100	71.483	Paramormyrops_kingsleyae
ENSORLG00015018830	sall1a	100	69.271	ENSPSIG00000008582	SALL1	100	69.248	Pelodiscus_sinensis
ENSORLG00015018830	sall1a	99	85.919	ENSPMGG00000021788	sall1a	99	83.321	Periophthalmus_magnuspinnatus
ENSORLG00015018830	sall1a	96	50.577	ENSPMAG00000008148	sall1b	97	49.286	Petromyzon_marinus
ENSORLG00015018830	sall1a	99	68.438	ENSPCIG00000017840	SALL1	99	68.243	Phascolarctos_cinereus
ENSORLG00015018830	sall1a	100	91.315	ENSPFOG00000015799	sall1a	96	90.365	Poecilia_formosa
ENSORLG00015018830	sall1a	100	91.400	ENSPLAG00000022539	sall1a	100	90.680	Poecilia_latipinna
ENSORLG00015018830	sall1a	100	91.484	ENSPMEG00000020894	sall1a	100	90.833	Poecilia_mexicana
ENSORLG00015018830	sall1a	100	90.894	ENSPREG00000006802	sall1a	100	90.222	Poecilia_reticulata
ENSORLG00015018830	sall1a	90	66.667	ENSPPYG00000007345	SALL1	96	66.890	Pongo_abelii
ENSORLG00015018830	sall1a	86	69.291	ENSPCAG00000008162	SALL1	93	69.358	Procavia_capensis
ENSORLG00015018830	sall1a	100	67.240	ENSPCOG00000028192	SALL1	100	67.665	Propithecus_coquereli
ENSORLG00015018830	sall1a	74	69.585	ENSPVAG00000015374	SALL1	100	69.942	Pteropus_vampyrus
ENSORLG00015018830	sall1a	100	91.216	ENSPNYG00000010865	sall1a	100	90.751	Pundamilia_nyererei
ENSORLG00015018830	sall1a	100	78.104	ENSPNAG00000023644	sall1a	100	77.947	Pygocentrus_nattereri
ENSORLG00015018830	sall1a	99	52.640	ENSPNAG00000007442	sall1b	99	52.941	Pygocentrus_nattereri
ENSORLG00015018830	sall1a	72	65.306	ENSPNAG00000028248	-	84	65.306	Pygocentrus_nattereri
ENSORLG00015018830	sall1a	100	66.667	ENSRNOG00000013907	Sall1	100	66.990	Rattus_norvegicus
ENSORLG00015018830	sall1a	96	69.966	ENSRBIG00000015707	SALL1	99	68.087	Rhinopithecus_bieti
ENSORLG00015018830	sall1a	96	69.991	ENSRROG00000035777	SALL1	99	68.098	Rhinopithecus_roxellana
ENSORLG00015018830	sall1a	99	67.809	ENSSBOG00000032186	SALL1	100	68.084	Saimiri_boliviensis_boliviensis
ENSORLG00015018830	sall1a	97	70.367	ENSSHAG00000009477	SALL1	99	68.018	Sarcophilus_harrisii
ENSORLG00015018830	sall1a	100	71.536	ENSSFOG00015001590	sall1a	99	70.625	Scleropages_formosus
ENSORLG00015018830	sall1a	97	76.227	ENSSFOG00015020020	sall1a	100	72.445	Scleropages_formosus
ENSORLG00015018830	sall1a	99	91.462	ENSSMAG00000009160	sall1a	99	90.658	Scophthalmus_maximus
ENSORLG00015018830	sall1a	90	59.184	ENSSDUG00000000748	sall1b	99	59.184	Seriola_dumerili
ENSORLG00015018830	sall1a	99	92.984	ENSSDUG00000006507	sall1a	99	92.479	Seriola_dumerili
ENSORLG00015018830	sall1a	58	88.235	ENSSLDG00000014465	-	80	88.235	Seriola_lalandi_dorsalis
ENSORLG00015018830	sall1a	99	93.153	ENSSLDG00000017721	sall1a	99	92.420	Seriola_lalandi_dorsalis
ENSORLG00015018830	sall1a	96	69.532	ENSSARG00000000661	SALL1	99	67.559	Sorex_araneus
ENSORLG00015018830	sall1a	100	68.243	ENSSPUG00000000156	SALL1	100	68.520	Sphenodon_punctatus
ENSORLG00015018830	sall1a	100	93.249	ENSSPAG00000021615	sall1a	100	92.737	Stegastes_partitus
ENSORLG00015018830	sall1a	100	66.766	ENSSSCG00000002836	SALL1	100	66.916	Sus_scrofa
ENSORLG00015018830	sall1a	100	68.971	ENSTGUG00000007514	SALL1	100	68.820	Taeniopygia_guttata
ENSORLG00015018830	sall1a	91	86.025	ENSTRUG00000008950	sall1a	100	86.025	Takifugu_rubripes
ENSORLG00015018830	sall1a	92	84.500	ENSTNIG00000004257	sall1a	100	84.500	Tetraodon_nigroviridis
ENSORLG00015018830	sall1a	69	76.712	ENSTBEG00000002119	-	53	76.712	Tupaia_belangeri
ENSORLG00015018830	sall1a	90	65.385	ENSUAMG00000023379	-	92	65.420	Ursus_americanus
ENSORLG00015018830	sall1a	90	65.442	ENSVVUG00000019383	-	99	65.752	Vulpes_vulpes
ENSORLG00015018830	sall1a	63	37.264	ENSXETG00000017176	sall2	59	46.203	Xenopus_tropicalis
ENSORLG00015018830	sall1a	99	67.755	ENSXETG00000018417	sall1	100	65.077	Xenopus_tropicalis
ENSORLG00015018830	sall1a	100	91.315	ENSXMAG00000016273	sall1a	100	90.849	Xiphophorus_maculatus