EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015018865 (Gene tree)
Gene ID: -
Gene Symbol: shrprbck1r
Alias: -
Full Name: sharpin and rbck1 related
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 9341 bases
Position: chr20:16181074-16190414
Accession: ZDB-GENE-080220-52
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015017825	zf-RanBP	PF00641.18	2.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015026372	-	3324	-	ENSORLP00015017825	706 (aa)	-	-

Gene Model

Click here to download ENSORLG00015018865's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015018865's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015018865	shrprbck1r	59	55.682	ENSORLG00015009860	sharpin	95	55.682

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015018865	shrprbck1r	59	56.064	ENSAPOG00000023352	sharpin	95	56.064	Acanthochromis_polyacanthus
ENSORLG00015018865	shrprbck1r	100	80.447	ENSAPOG00000022737	shrprbck1r	100	80.447	Acanthochromis_polyacanthus
ENSORLG00015018865	shrprbck1r	100	79.466	ENSACIG00000002184	shrprbck1r	100	79.466	Amphilophus_citrinellus
ENSORLG00015018865	shrprbck1r	100	82.725	ENSAOCG00000002890	shrprbck1r	100	82.725	Amphiprion_ocellaris
ENSORLG00015018865	shrprbck1r	59	56.293	ENSAOCG00000017464	sharpin	95	56.293	Amphiprion_ocellaris
ENSORLG00015018865	shrprbck1r	59	56.293	ENSAPEG00000004049	sharpin	95	56.293	Amphiprion_percula
ENSORLG00015018865	shrprbck1r	100	80.365	ENSAPEG00000023274	shrprbck1r	100	80.365	Amphiprion_percula
ENSORLG00015018865	shrprbck1r	100	77.465	ENSATEG00000014561	shrprbck1r	100	77.746	Anabas_testudineus
ENSORLG00015018865	shrprbck1r	60	57.176	ENSATEG00000007832	sharpin	88	57.176	Anabas_testudineus
ENSORLG00015018865	shrprbck1r	100	78.481	ENSACLG00000022609	shrprbck1r	100	78.622	Astatotilapia_calliptera
ENSORLG00015018865	shrprbck1r	54	54.359	ENSAMXG00000006229	sharpin	97	54.359	Astyanax_mexicanus
ENSORLG00015018865	shrprbck1r	100	67.852	ENSAMXG00000021016	shrprbck1r	100	67.945	Astyanax_mexicanus
ENSORLG00015018865	shrprbck1r	100	74.298	ENSCSEG00000011306	shrprbck1r	100	74.438	Cynoglossus_semilaevis
ENSORLG00015018865	shrprbck1r	100	78.561	ENSCVAG00000007250	shrprbck1r	100	78.561	Cyprinodon_variegatus
ENSORLG00015018865	shrprbck1r	59	54.503	ENSCVAG00000006586	sharpin	95	54.503	Cyprinodon_variegatus
ENSORLG00015018865	shrprbck1r	55	53.077	ENSDARG00000076995	sharpin	94	53.077	Danio_rerio
ENSORLG00015018865	shrprbck1r	100	69.402	ENSDARG00000059871	shrprbck1r	100	69.402	Danio_rerio
ENSORLG00015018865	shrprbck1r	100	70.448	ENSELUG00000016022	shrprbck1r	100	70.448	Esox_lucius
ENSORLG00015018865	shrprbck1r	59	54.503	ENSFHEG00000013564	sharpin	94	54.503	Fundulus_heteroclitus
ENSORLG00015018865	shrprbck1r	51	60.725	ENSGMOG00000010123	sharpin	91	60.725	Gadus_morhua
ENSORLG00015018865	shrprbck1r	59	42.263	ENSGAFG00000021405	sharpin	95	42.263	Gambusia_affinis
ENSORLG00015018865	shrprbck1r	100	77.715	ENSGAFG00000009309	shrprbck1r	100	77.715	Gambusia_affinis
ENSORLG00015018865	shrprbck1r	75	76.648	ENSGACG00000002544	shrprbck1r	99	76.648	Gasterosteus_aculeatus
ENSORLG00015018865	shrprbck1r	100	78.622	ENSHBUG00000021933	shrprbck1r	100	78.682	Haplochromis_burtoni
ENSORLG00015018865	shrprbck1r	60	50.820	ENSHCOG00000018847	sharpin	80	51.163	Hippocampus_comes
ENSORLG00015018865	shrprbck1r	54	54.359	ENSIPUG00000011951	sharpin	95	88.462	Ictalurus_punctatus
ENSORLG00015018865	shrprbck1r	96	67.493	ENSIPUG00000014247	shrprbck1r	95	67.493	Ictalurus_punctatus
ENSORLG00015018865	shrprbck1r	100	78.442	ENSKMAG00000015215	shrprbck1r	100	78.442	Kryptolebias_marmoratus
ENSORLG00015018865	shrprbck1r	59	55.787	ENSKMAG00000015204	sharpin	76	55.787	Kryptolebias_marmoratus
ENSORLG00015018865	shrprbck1r	100	78.732	ENSLBEG00000016876	shrprbck1r	100	78.873	Labrus_bergylta
ENSORLG00015018865	shrprbck1r	60	56.463	ENSLBEG00000016624	sharpin	96	56.463	Labrus_bergylta
ENSORLG00015018865	shrprbck1r	95	53.079	ENSLACG00000010948	-	97	53.079	Latimeria_chalumnae
ENSORLG00015018865	shrprbck1r	100	67.316	ENSLOCG00000008910	shrprbck1r	100	67.316	Lepisosteus_oculatus
ENSORLG00015018865	shrprbck1r	100	77.465	ENSMAMG00000022930	shrprbck1r	100	77.606	Mastacembelus_armatus
ENSORLG00015018865	shrprbck1r	100	78.340	ENSMZEG00005021257	shrprbck1r	100	78.481	Maylandia_zebra
ENSORLG00015018865	shrprbck1r	100	75.346	ENSMMOG00000003764	shrprbck1r	100	75.627	Mola_mola
ENSORLG00015018865	shrprbck1r	96	78.203	ENSMALG00000008861	shrprbck1r	95	78.203	Monopterus_albus
ENSORLG00015018865	shrprbck1r	100	78.762	ENSNBRG00000002270	shrprbck1r	100	78.903	Neolamprologus_brichardi
ENSORLG00015018865	shrprbck1r	100	78.340	ENSONIG00000014401	shrprbck1r	100	78.481	Oreochromis_niloticus
ENSORLG00015018865	shrprbck1r	55	53.041	ENSONIG00000009626	-	97	53.041	Oreochromis_niloticus
ENSORLG00015018865	shrprbck1r	59	55.556	ENSORLG00000017281	sharpin	95	55.556	Oryzias_latipes
ENSORLG00015018865	shrprbck1r	100	97.884	ENSORLG00000007392	shrprbck1r	100	97.884	Oryzias_latipes
ENSORLG00015018865	shrprbck1r	59	55.455	ENSORLG00020000801	sharpin	95	55.455	Oryzias_latipes_hni
ENSORLG00015018865	shrprbck1r	100	97.038	ENSORLG00020018619	shrprbck1r	100	97.038	Oryzias_latipes_hni
ENSORLG00015018865	shrprbck1r	100	93.230	ENSOMEG00000012749	shrprbck1r	100	93.230	Oryzias_melastigma
ENSORLG00015018865	shrprbck1r	100	68.619	ENSPKIG00000006933	shrprbck1r	100	68.759	Paramormyrops_kingsleyae
ENSORLG00015018865	shrprbck1r	65	57.962	ENSPKIG00000018308	-	96	57.962	Paramormyrops_kingsleyae
ENSORLG00015018865	shrprbck1r	100	74.085	ENSPMGG00000013254	shrprbck1r	100	74.085	Periophthalmus_magnuspinnatus
ENSORLG00015018865	shrprbck1r	100	78.420	ENSPFOG00000004214	shrprbck1r	100	78.420	Poecilia_formosa
ENSORLG00015018865	shrprbck1r	59	53.563	ENSPFOG00000015253	sharpin	95	53.563	Poecilia_formosa
ENSORLG00015018865	shrprbck1r	100	78.420	ENSPLAG00000020523	shrprbck1r	100	78.420	Poecilia_latipinna
ENSORLG00015018865	shrprbck1r	59	53.793	ENSPLAG00000000423	sharpin	95	53.793	Poecilia_latipinna
ENSORLG00015018865	shrprbck1r	100	76.587	ENSPMEG00000006877	shrprbck1r	100	76.587	Poecilia_mexicana
ENSORLG00015018865	shrprbck1r	59	52.644	ENSPREG00000009702	sharpin	95	52.644	Poecilia_reticulata
ENSORLG00015018865	shrprbck1r	100	75.317	ENSPREG00000014689	shrprbck1r	100	75.317	Poecilia_reticulata
ENSORLG00015018865	shrprbck1r	100	78.762	ENSPNYG00000022601	shrprbck1r	100	78.903	Pundamilia_nyererei
ENSORLG00015018865	shrprbck1r	55	53.728	ENSPNAG00000002911	sharpin	99	53.846	Pygocentrus_nattereri
ENSORLG00015018865	shrprbck1r	100	66.027	ENSPNAG00000007847	shrprbck1r	100	66.027	Pygocentrus_nattereri
ENSORLG00015018865	shrprbck1r	75	63.653	ENSSFOG00015014150	-	96	63.653	Scleropages_formosus
ENSORLG00015018865	shrprbck1r	63	51.633	ENSSFOG00015004028	sharpin	99	52.305	Scleropages_formosus
ENSORLG00015018865	shrprbck1r	100	76.217	ENSSMAG00000018085	shrprbck1r	100	76.356	Scophthalmus_maximus
ENSORLG00015018865	shrprbck1r	100	81.408	ENSSDUG00000002959	shrprbck1r	100	81.549	Seriola_dumerili
ENSORLG00015018865	shrprbck1r	60	42.299	ENSSDUG00000019039	sharpin	96	42.299	Seriola_dumerili
ENSORLG00015018865	shrprbck1r	100	80.563	ENSSLDG00000009026	shrprbck1r	100	80.704	Seriola_lalandi_dorsalis
ENSORLG00015018865	shrprbck1r	96	79.681	ENSSPAG00000016097	shrprbck1r	99	79.681	Stegastes_partitus
ENSORLG00015018865	shrprbck1r	59	49.423	ENSTRUG00000011046	sharpin	96	49.425	Takifugu_rubripes
ENSORLG00015018865	shrprbck1r	100	74.860	ENSTRUG00000006949	shrprbck1r	100	75.983	Takifugu_rubripes
ENSORLG00015018865	shrprbck1r	55	53.117	ENSTNIG00000008521	sharpin	94	53.367	Tetraodon_nigroviridis
ENSORLG00015018865	shrprbck1r	100	74.543	ENSXCOG00000006701	shrprbck1r	100	74.543	Xiphophorus_couchianus
ENSORLG00015018865	shrprbck1r	59	42.923	ENSXCOG00000015019	sharpin	96	42.923	Xiphophorus_couchianus
ENSORLG00015018865	shrprbck1r	59	53.226	ENSXMAG00000022076	sharpin	95	53.226	Xiphophorus_maculatus
ENSORLG00015018865	shrprbck1r	100	74.262	ENSXMAG00000018972	shrprbck1r	100	74.262	Xiphophorus_maculatus