EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015018915 (Gene tree)
Gene ID: -
Gene Symbol: trnt1
Alias: -
Full Name: tRNA nucleotidyl transferase%2C CCA-adding%2C 1
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 15021 bases
Position: chr5:7338146-7353166
Accession: ZDB-GENE-040625-176
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015033474	PolyA_pol	PF01743.20	1.2e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015026410	-	3214	-	ENSORLP00015033474	426 (aa)	-	-

Gene Model

Click here to download ENSORLG00015018915's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015018915's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015018915	trnt1	99	65.412	ENSG00000072756	TRNT1	98	65.412	Homo_sapiens
ENSORLG00015018915	trnt1	98	78.897	ENSAPOG00000013687	trnt1	97	78.897	Acanthochromis_polyacanthus
ENSORLG00015018915	trnt1	99	64.387	ENSAMEG00000014520	TRNT1	97	64.387	Ailuropoda_melanoleuca
ENSORLG00015018915	trnt1	99	80.706	ENSACIG00000021706	trnt1	99	80.706	Amphilophus_citrinellus
ENSORLG00015018915	trnt1	98	81.340	ENSAOCG00000024612	trnt1	98	81.340	Amphiprion_ocellaris
ENSORLG00015018915	trnt1	95	74.442	ENSAPEG00000022627	trnt1	93	74.442	Amphiprion_percula
ENSORLG00015018915	trnt1	95	83.375	ENSATEG00000008928	trnt1	99	83.375	Anabas_testudineus
ENSORLG00015018915	trnt1	90	67.277	ENSAPLG00000004258	TRNT1	95	67.277	Anas_platyrhynchos
ENSORLG00015018915	trnt1	99	63.765	ENSACAG00000005657	TRNT1	96	63.765	Anolis_carolinensis
ENSORLG00015018915	trnt1	99	65.176	ENSANAG00000024802	TRNT1	98	65.176	Aotus_nancymaae
ENSORLG00015018915	trnt1	99	79.254	ENSACLG00000022227	trnt1	100	79.254	Astatotilapia_calliptera
ENSORLG00015018915	trnt1	99	72.664	ENSAMXG00000003960	trnt1	99	72.664	Astyanax_mexicanus
ENSORLG00015018915	trnt1	99	63.744	ENSBTAG00000019534	TRNT1	97	63.744	Bos_taurus
ENSORLG00015018915	trnt1	95	43.373	WBGene00010089	hpo-31	94	43.373	Caenorhabditis_elegans
ENSORLG00015018915	trnt1	99	64.941	ENSCJAG00000015466	TRNT1	98	64.941	Callithrix_jacchus
ENSORLG00015018915	trnt1	95	66.749	ENSCAFG00000005985	TRNT1	93	66.749	Canis_familiaris
ENSORLG00015018915	trnt1	95	66.749	ENSCAFG00020014746	TRNT1	93	66.749	Canis_lupus_dingo
ENSORLG00015018915	trnt1	99	64.455	ENSCHIG00000007030	TRNT1	97	64.455	Capra_hircus
ENSORLG00015018915	trnt1	99	65.094	ENSTSYG00000013390	TRNT1	96	65.094	Carlito_syrichta
ENSORLG00015018915	trnt1	88	51.724	ENSCAPG00000006891	TRNT1	99	51.724	Cavia_aperea
ENSORLG00015018915	trnt1	99	64.218	ENSCPOG00000007849	TRNT1	92	70.161	Cavia_porcellus
ENSORLG00015018915	trnt1	96	64.390	ENSCCAG00000002919	TRNT1	99	64.390	Cebus_capucinus
ENSORLG00015018915	trnt1	99	65.412	ENSCATG00000031985	TRNT1	97	65.412	Cercocebus_atys
ENSORLG00015018915	trnt1	99	65.330	ENSCLAG00000005186	TRNT1	88	73.846	Chinchilla_lanigera
ENSORLG00015018915	trnt1	99	65.412	ENSCSAG00000011052	TRNT1	98	65.412	Chlorocebus_sabaeus
ENSORLG00015018915	trnt1	84	72.680	ENSCHOG00000005712	TRNT1	81	72.680	Choloepus_hoffmanni
ENSORLG00015018915	trnt1	98	67.225	ENSCPBG00000017636	TRNT1	95	67.225	Chrysemys_picta_bellii
ENSORLG00015018915	trnt1	95	40.988	ENSCING00000007069	-	99	40.988	Ciona_intestinalis
ENSORLG00015018915	trnt1	99	40.802	ENSCSAVG00000007494	-	99	40.802	Ciona_savignyi
ENSORLG00015018915	trnt1	99	65.647	ENSCANG00000039030	TRNT1	98	65.647	Colobus_angolensis_palliatus
ENSORLG00015018915	trnt1	98	65.871	ENSCGRG00001009998	Trnt1	96	65.871	Cricetulus_griseus_chok1gshd
ENSORLG00015018915	trnt1	98	65.871	ENSCGRG00000013410	Trnt1	91	74.742	Cricetulus_griseus_crigri
ENSORLG00015018915	trnt1	96	78.240	ENSCSEG00000008157	trnt1	96	78.240	Cynoglossus_semilaevis
ENSORLG00015018915	trnt1	99	80.896	ENSCVAG00000019770	trnt1	99	80.896	Cyprinodon_variegatus
ENSORLG00015018915	trnt1	98	73.944	ENSDARG00000075297	trnt1	99	73.944	Danio_rerio
ENSORLG00015018915	trnt1	99	65.877	ENSDNOG00000008837	TRNT1	97	65.877	Dasypus_novemcinctus
ENSORLG00015018915	trnt1	96	67.402	ENSDORG00000014035	Trnt1	94	67.402	Dipodomys_ordii
ENSORLG00015018915	trnt1	94	48.649	FBgn0037369	CG2100	83	48.649	Drosophila_melanogaster
ENSORLG00015018915	trnt1	58	71.138	ENSETEG00000018177	TRNT1	99	71.138	Echinops_telfairi
ENSORLG00015018915	trnt1	99	61.611	ENSEBUG00000012779	-	99	61.611	Eptatretus_burgeri
ENSORLG00015018915	trnt1	99	65.485	ENSEASG00005003577	TRNT1	96	65.485	Equus_asinus_asinus
ENSORLG00015018915	trnt1	99	65.721	ENSECAG00000014420	TRNT1	96	65.721	Equus_caballus
ENSORLG00015018915	trnt1	99	66.355	ENSEEUG00000009567	TRNT1	99	66.355	Erinaceus_europaeus
ENSORLG00015018915	trnt1	98	77.088	ENSELUG00000003802	trnt1	97	77.088	Esox_lucius
ENSORLG00015018915	trnt1	99	64.929	ENSFCAG00000026805	TRNT1	97	64.929	Felis_catus
ENSORLG00015018915	trnt1	90	67.016	ENSFALG00000013539	TRNT1	99	67.016	Ficedula_albicollis
ENSORLG00015018915	trnt1	99	63.915	ENSFDAG00000018412	TRNT1	96	63.915	Fukomys_damarensis
ENSORLG00015018915	trnt1	96	84.069	ENSFHEG00000019294	trnt1	96	84.069	Fundulus_heteroclitus
ENSORLG00015018915	trnt1	98	76.259	ENSGMOG00000007460	trnt1	98	76.259	Gadus_morhua
ENSORLG00015018915	trnt1	96	64.792	ENSGALG00000017368	TRNT1	95	64.792	Gallus_gallus
ENSORLG00015018915	trnt1	99	79.953	ENSGAFG00000008647	trnt1	100	79.953	Gambusia_affinis
ENSORLG00015018915	trnt1	97	79.419	ENSGACG00000011903	trnt1	96	81.462	Gasterosteus_aculeatus
ENSORLG00015018915	trnt1	97	68.447	ENSGAGG00000020942	TRNT1	94	68.447	Gopherus_agassizii
ENSORLG00015018915	trnt1	99	65.412	ENSGGOG00000015286	TRNT1	98	65.412	Gorilla_gorilla
ENSORLG00015018915	trnt1	99	79.487	ENSHBUG00000002797	trnt1	100	79.487	Haplochromis_burtoni
ENSORLG00015018915	trnt1	99	59.765	ENSHGLG00000000221	-	96	59.765	Heterocephalus_glaber_female
ENSORLG00015018915	trnt1	99	64.387	ENSHGLG00000003649	TRNT1	96	64.387	Heterocephalus_glaber_female
ENSORLG00015018915	trnt1	99	63.208	ENSHGLG00100016421	TRNT1	92	67.677	Heterocephalus_glaber_male
ENSORLG00015018915	trnt1	99	73.005	ENSHCOG00000010618	trnt1	99	73.005	Hippocampus_comes
ENSORLG00015018915	trnt1	96	75.061	ENSIPUG00000000971	trnt1	95	75.061	Ictalurus_punctatus
ENSORLG00015018915	trnt1	98	67.542	ENSSTOG00000000150	TRNT1	92	76.440	Ictidomys_tridecemlineatus
ENSORLG00015018915	trnt1	99	64.953	ENSJJAG00000018561	Trnt1	98	64.953	Jaculus_jaculus
ENSORLG00015018915	trnt1	99	82.160	ENSKMAG00000011307	trnt1	100	82.160	Kryptolebias_marmoratus
ENSORLG00015018915	trnt1	96	72.263	ENSLBEG00000019457	trnt1	97	72.263	Labrus_bergylta
ENSORLG00015018915	trnt1	96	68.949	ENSLACG00000013227	TRNT1	94	68.949	Latimeria_chalumnae
ENSORLG00015018915	trnt1	98	71.905	ENSLOCG00000011105	trnt1	96	71.905	Lepisosteus_oculatus
ENSORLG00015018915	trnt1	99	64.858	ENSLAFG00000023191	TRNT1	96	64.858	Loxodonta_africana
ENSORLG00015018915	trnt1	99	65.412	ENSMFAG00000045113	TRNT1	97	65.412	Macaca_fascicularis
ENSORLG00015018915	trnt1	99	65.412	ENSMMUG00000017983	TRNT1	97	65.412	Macaca_mulatta
ENSORLG00015018915	trnt1	99	65.412	ENSMNEG00000037805	TRNT1	97	65.412	Macaca_nemestrina
ENSORLG00015018915	trnt1	90	67.539	ENSMLEG00000033671	TRNT1	99	67.539	Mandrillus_leucophaeus
ENSORLG00015018915	trnt1	98	79.904	ENSMAMG00000023401	trnt1	98	79.904	Mastacembelus_armatus
ENSORLG00015018915	trnt1	99	79.254	ENSMZEG00005009141	trnt1	100	79.254	Maylandia_zebra
ENSORLG00015018915	trnt1	75	62.382	ENSMGAG00000009971	TRNT1	99	62.382	Meleagris_gallopavo
ENSORLG00015018915	trnt1	99	64.858	ENSMAUG00000020707	Trnt1	96	64.858	Mesocricetus_auratus
ENSORLG00015018915	trnt1	99	66.429	ENSMICG00000016615	TRNT1	97	66.429	Microcebus_murinus
ENSORLG00015018915	trnt1	99	65.476	ENSMOCG00000004539	Trnt1	97	65.476	Microtus_ochrogaster
ENSORLG00015018915	trnt1	99	77.594	ENSMMOG00000010742	trnt1	99	77.594	Mola_mola
ENSORLG00015018915	trnt1	99	65.877	ENSMODG00000004368	TRNT1	97	65.877	Monodelphis_domestica
ENSORLG00015018915	trnt1	99	77.855	ENSMALG00000008376	trnt1	99	77.855	Monopterus_albus
ENSORLG00015018915	trnt1	99	64.623	MGP_CAROLIEiJ_G0028698	Trnt1	93	70.385	Mus_caroli
ENSORLG00015018915	trnt1	99	64.623	ENSMUSG00000013736	Trnt1	87	74.359	Mus_musculus
ENSORLG00015018915	trnt1	99	64.858	MGP_PahariEiJ_G0022449	Trnt1	93	74.359	Mus_pahari
ENSORLG00015018915	trnt1	99	64.623	MGP_SPRETEiJ_G0029726	Trnt1	87	74.359	Mus_spretus
ENSORLG00015018915	trnt1	99	64.929	ENSMPUG00000017017	TRNT1	97	64.929	Mustela_putorius_furo
ENSORLG00015018915	trnt1	90	68.063	ENSMLUG00000011864	TRNT1	99	68.063	Myotis_lucifugus
ENSORLG00015018915	trnt1	98	64.916	ENSNGAG00000000537	Trnt1	86	75.916	Nannospalax_galili
ENSORLG00015018915	trnt1	80	78.448	ENSNBRG00000023606	trnt1	99	78.448	Neolamprologus_brichardi
ENSORLG00015018915	trnt1	99	65.647	ENSNLEG00000003226	TRNT1	98	65.647	Nomascus_leucogenys
ENSORLG00015018915	trnt1	98	65.550	ENSMEUG00000004684	TRNT1	96	65.550	Notamacropus_eugenii
ENSORLG00015018915	trnt1	90	64.136	ENSOPRG00000015067	TRNT1	99	64.136	Ochotona_princeps
ENSORLG00015018915	trnt1	99	64.858	ENSODEG00000007597	TRNT1	96	64.858	Octodon_degus
ENSORLG00015018915	trnt1	99	80.140	ENSONIG00000020273	trnt1	98	80.140	Oreochromis_niloticus
ENSORLG00015018915	trnt1	95	64.532	ENSOANG00000007514	TRNT1	94	64.532	Ornithorhynchus_anatinus
ENSORLG00015018915	trnt1	98	65.394	ENSOCUG00000008580	TRNT1	96	65.394	Oryctolagus_cuniculus
ENSORLG00015018915	trnt1	99	98.345	ENSORLG00000003165	trnt1	100	98.345	Oryzias_latipes
ENSORLG00015018915	trnt1	99	98.582	ENSORLG00020022060	trnt1	100	98.582	Oryzias_latipes_hni
ENSORLG00015018915	trnt1	99	84.870	ENSOMEG00000003331	trnt1	100	84.870	Oryzias_melastigma
ENSORLG00015018915	trnt1	99	64.455	ENSOARG00000008631	TRNT1	97	64.455	Ovis_aries
ENSORLG00015018915	trnt1	99	65.176	ENSPPAG00000043566	TRNT1	98	65.176	Pan_paniscus
ENSORLG00015018915	trnt1	99	65.166	ENSPPRG00000001327	TRNT1	97	65.166	Panthera_pardus
ENSORLG00015018915	trnt1	99	65.166	ENSPTIG00000011448	TRNT1	97	65.166	Panthera_tigris_altaica
ENSORLG00015018915	trnt1	99	65.176	ENSPTRG00000014564	TRNT1	98	65.176	Pan_troglodytes
ENSORLG00015018915	trnt1	99	65.412	ENSPANG00000025944	TRNT1	97	65.412	Papio_anubis
ENSORLG00015018915	trnt1	99	71.963	ENSPKIG00000020015	trnt1	99	71.963	Paramormyrops_kingsleyae
ENSORLG00015018915	trnt1	93	68.354	ENSPSIG00000017356	TRNT1	99	68.611	Pelodiscus_sinensis
ENSORLG00015018915	trnt1	96	77.941	ENSPMGG00000008888	trnt1	94	77.941	Periophthalmus_magnuspinnatus
ENSORLG00015018915	trnt1	99	65.094	ENSPEMG00000019845	Trnt1	96	65.094	Peromyscus_maniculatus_bairdii
ENSORLG00015018915	trnt1	99	65.640	ENSPCIG00000030436	TRNT1	97	65.640	Phascolarctos_cinereus
ENSORLG00015018915	trnt1	96	82.885	ENSPFOG00000006194	trnt1	96	82.885	Poecilia_formosa
ENSORLG00015018915	trnt1	96	82.885	ENSPLAG00000015623	trnt1	100	82.921	Poecilia_latipinna
ENSORLG00015018915	trnt1	99	80.186	ENSPMEG00000012216	trnt1	100	82.673	Poecilia_mexicana
ENSORLG00015018915	trnt1	99	79.953	ENSPREG00000021470	trnt1	100	79.953	Poecilia_reticulata
ENSORLG00015018915	trnt1	99	65.176	ENSPPYG00000013702	TRNT1	98	65.176	Pongo_abelii
ENSORLG00015018915	trnt1	90	67.801	ENSPCAG00000001951	TRNT1	99	67.801	Procavia_capensis
ENSORLG00015018915	trnt1	99	64.941	ENSPCOG00000022228	TRNT1	96	64.941	Propithecus_coquereli
ENSORLG00015018915	trnt1	90	66.230	ENSPVAG00000008784	TRNT1	99	66.230	Pteropus_vampyrus
ENSORLG00015018915	trnt1	99	79.254	ENSPNYG00000003120	trnt1	100	79.254	Pundamilia_nyererei
ENSORLG00015018915	trnt1	99	73.598	ENSPNAG00000000565	trnt1	99	73.598	Pygocentrus_nattereri
ENSORLG00015018915	trnt1	99	65.094	ENSRNOG00000006432	Trnt1	96	65.094	Rattus_norvegicus
ENSORLG00015018915	trnt1	99	64.471	ENSRBIG00000042632	TRNT1	98	64.471	Rhinopithecus_bieti
ENSORLG00015018915	trnt1	99	65.412	ENSRROG00000036866	TRNT1	98	65.412	Rhinopithecus_roxellana
ENSORLG00015018915	trnt1	99	64.941	ENSSBOG00000021208	TRNT1	98	64.941	Saimiri_boliviensis_boliviensis
ENSORLG00015018915	trnt1	95	66.010	ENSSHAG00000018861	TRNT1	94	66.010	Sarcophilus_harrisii
ENSORLG00015018915	trnt1	99	71.329	ENSSFOG00015020844	trnt1	99	71.329	Scleropages_formosus
ENSORLG00015018915	trnt1	96	80.392	ENSSMAG00000015432	trnt1	94	80.392	Scophthalmus_maximus
ENSORLG00015018915	trnt1	96	82.108	ENSSDUG00000012320	trnt1	96	82.108	Seriola_dumerili
ENSORLG00015018915	trnt1	96	81.863	ENSSLDG00000009325	trnt1	96	81.863	Seriola_lalandi_dorsalis
ENSORLG00015018915	trnt1	57	78.838	ENSSLDG00000016463	-	91	79.079	Seriola_lalandi_dorsalis
ENSORLG00015018915	trnt1	90	69.110	ENSSPUG00000014153	TRNT1	99	69.110	Sphenodon_punctatus
ENSORLG00015018915	trnt1	99	78.923	ENSSPAG00000021005	trnt1	99	78.923	Stegastes_partitus
ENSORLG00015018915	trnt1	99	65.403	ENSSSCG00000011529	TRNT1	97	65.403	Sus_scrofa
ENSORLG00015018915	trnt1	95	66.584	ENSTGUG00000010192	TRNT1	99	66.584	Taeniopygia_guttata
ENSORLG00015018915	trnt1	99	75.467	ENSTRUG00000001088	trnt1	99	75.467	Takifugu_rubripes
ENSORLG00015018915	trnt1	99	76.402	ENSTNIG00000007363	trnt1	98	76.402	Tetraodon_nigroviridis
ENSORLG00015018915	trnt1	61	60.000	ENSTBEG00000006367	TRNT1	86	60.000	Tupaia_belangeri
ENSORLG00015018915	trnt1	99	64.929	ENSTTRG00000007803	TRNT1	97	64.929	Tursiops_truncatus
ENSORLG00015018915	trnt1	95	66.256	ENSUAMG00000022574	TRNT1	93	66.256	Ursus_americanus
ENSORLG00015018915	trnt1	95	66.256	ENSUMAG00000024092	TRNT1	93	66.256	Ursus_maritimus
ENSORLG00015018915	trnt1	95	66.749	ENSVVUG00000012810	TRNT1	93	66.749	Vulpes_vulpes
ENSORLG00015018915	trnt1	96	59.709	ENSXETG00000025091	trnt1	99	60.199	Xenopus_tropicalis
ENSORLG00015018915	trnt1	99	79.720	ENSXCOG00000010150	trnt1	100	79.720	Xiphophorus_couchianus
ENSORLG00015018915	trnt1	99	79.487	ENSXMAG00000002227	trnt1	100	79.487	Xiphophorus_maculatus