EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015019021 (Gene tree)
Gene ID: -
Gene Symbol: cnot3b
Alias: -
Full Name: CCR4-NOT transcription complex%2C subunit 3b
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 35632 bases
Position: chr11:15014987-15050618
Accession: ZDB-GENE-030131-5838
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015017980	Not3	PF04065.15	4.9e-96	1	1
ENSORLP00015017960	Not3	PF04065.15	5.8e-75	1	2
ENSORLP00015017960	Not3	PF04065.15	5.8e-75	2	2
ENSORLP00015017980	NOT2_3_5	PF04153.18	1e-39	1	1
ENSORLP00015017960	NOT2_3_5	PF04153.18	1e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015026564	-	5604	-	ENSORLP00015017980	914 (aa)	-	-
ENSORLT00015034956	-	5529	-	ENSORLP00015017960	889 (aa)	-	-

Gene Model

Click here to download ENSORLG00015019021's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015019021's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015019021	cnot3b	57	61.122	ENSORLG00015013729	cnot3a	100	66.559

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015019021	cnot3b	54	82.796	ENSAPOG00000015499	CNOT3	86	82.796	Acanthochromis_polyacanthus
ENSORLG00015019021	cnot3b	78	94.064	ENSAPOG00000015002	cnot3b	75	94.064	Acanthochromis_polyacanthus
ENSORLG00015019021	cnot3b	67	92.434	ENSAMEG00000004528	CNOT3	72	92.131	Ailuropoda_melanoleuca
ENSORLG00015019021	cnot3b	67	95.089	ENSACIG00000003652	cnot3b	76	95.089	Amphilophus_citrinellus
ENSORLG00015019021	cnot3b	84	93.277	ENSACIG00000006635	cnot3a	91	93.277	Amphilophus_citrinellus
ENSORLG00015019021	cnot3b	97	74.586	ENSAOCG00000018385	-	98	80.952	Amphiprion_ocellaris
ENSORLG00015019021	cnot3b	51	66.958	ENSAPEG00000006624	cnot3a	61	61.071	Amphiprion_percula
ENSORLG00015019021	cnot3b	97	75.938	ENSAPEG00000002640	cnot3b	89	98.020	Amphiprion_percula
ENSORLG00015019021	cnot3b	100	80.426	ENSATEG00000015777	cnot3b	100	80.790	Anabas_testudineus
ENSORLG00015019021	cnot3b	51	63.889	ENSATEG00000022737	cnot3a	61	58.244	Anabas_testudineus
ENSORLG00015019021	cnot3b	80	76.942	ENSACAG00000016085	CNOT3	97	91.776	Anolis_carolinensis
ENSORLG00015019021	cnot3b	67	92.105	ENSANAG00000025756	CNOT3	74	91.803	Aotus_nancymaae
ENSORLG00015019021	cnot3b	100	81.156	ENSACLG00000016702	cnot3b	100	80.728	Astatotilapia_calliptera
ENSORLG00015019021	cnot3b	100	67.489	ENSAMXG00000012359	cnot3a	64	59.541	Astyanax_mexicanus
ENSORLG00015019021	cnot3b	100	70.588	ENSAMXG00000009447	cnot3b	70	90.909	Astyanax_mexicanus
ENSORLG00015019021	cnot3b	67	92.105	ENSBTAG00000014900	CNOT3	72	91.803	Bos_taurus
ENSORLG00015019021	cnot3b	70	86.228	ENSCJAG00000001094	CNOT3	71	91.803	Callithrix_jacchus
ENSORLG00015019021	cnot3b	76	77.225	ENSCAFG00000002699	CNOT3	71	91.803	Canis_familiaris
ENSORLG00015019021	cnot3b	76	77.225	ENSCAFG00020018359	CNOT3	71	91.803	Canis_lupus_dingo
ENSORLG00015019021	cnot3b	68	90.099	ENSCHIG00000015302	CNOT3	73	89.803	Capra_hircus
ENSORLG00015019021	cnot3b	67	92.105	ENSTSYG00000008058	CNOT3	72	91.803	Carlito_syrichta
ENSORLG00015019021	cnot3b	75	77.513	ENSCAPG00000009533	CNOT3	72	91.803	Cavia_aperea
ENSORLG00015019021	cnot3b	83	75.888	ENSCPOG00000020741	CNOT3	72	91.803	Cavia_porcellus
ENSORLG00015019021	cnot3b	67	92.105	ENSCCAG00000036290	CNOT3	75	91.803	Cebus_capucinus
ENSORLG00015019021	cnot3b	71	84.211	ENSCATG00000030324	CNOT3	72	91.803	Cercocebus_atys
ENSORLG00015019021	cnot3b	75	77.249	ENSCLAG00000003302	CNOT3	100	86.585	Chinchilla_lanigera
ENSORLG00015019021	cnot3b	71	84.211	ENSCSAG00000001900	CNOT3	72	91.803	Chlorocebus_sabaeus
ENSORLG00015019021	cnot3b	68	92.182	ENSCPBG00000011655	CNOT3	97	92.459	Chrysemys_picta_bellii
ENSORLG00015019021	cnot3b	79	56.940	ENSCING00000000293	-	66	71.239	Ciona_intestinalis
ENSORLG00015019021	cnot3b	71	83.333	ENSCANG00000013408	CNOT3	72	91.803	Colobus_angolensis_palliatus
ENSORLG00015019021	cnot3b	71	84.548	ENSCGRG00001000855	Cnot3	72	92.131	Cricetulus_griseus_chok1gshd
ENSORLG00015019021	cnot3b	100	65.111	ENSCSEG00000003574	cnot3a	100	66.384	Cynoglossus_semilaevis
ENSORLG00015019021	cnot3b	100	67.206	ENSCSEG00000016892	cnot3b	71	83.333	Cynoglossus_semilaevis
ENSORLG00015019021	cnot3b	100	79.568	ENSCVAG00000022122	cnot3b	100	80.496	Cyprinodon_variegatus
ENSORLG00015019021	cnot3b	54	61.145	ENSCVAG00000008168	cnot3a	100	65.668	Cyprinodon_variegatus
ENSORLG00015019021	cnot3b	100	65.213	ENSDARG00000007135	cnot3a	100	65.773	Danio_rerio
ENSORLG00015019021	cnot3b	57	64.313	ENSDARG00000019842	cnot3b	100	68.108	Danio_rerio
ENSORLG00015019021	cnot3b	67	91.776	ENSDNOG00000045972	CNOT3	72	91.475	Dasypus_novemcinctus
ENSORLG00015019021	cnot3b	75	76.984	ENSDORG00000008021	Cnot3	100	81.609	Dipodomys_ordii
ENSORLG00015019021	cnot3b	52	100.000	ENSETEG00000006305	CNOT3	59	100.000	Echinops_telfairi
ENSORLG00015019021	cnot3b	67	70.779	ENSEBUG00000010437	cnot3a	71	70.417	Eptatretus_burgeri
ENSORLG00015019021	cnot3b	67	92.105	ENSEASG00005021591	CNOT3	71	91.803	Equus_asinus_asinus
ENSORLG00015019021	cnot3b	67	92.105	ENSECAG00000023181	CNOT3	71	91.803	Equus_caballus
ENSORLG00015019021	cnot3b	100	73.439	ENSELUG00000000953	cnot3b	100	72.930	Esox_lucius
ENSORLG00015019021	cnot3b	100	63.251	ENSELUG00000014743	cnot3a	51	60.359	Esox_lucius
ENSORLG00015019021	cnot3b	76	77.487	ENSFCAG00000014042	CNOT3	72	91.803	Felis_catus
ENSORLG00015019021	cnot3b	68	94.068	ENSFHEG00000023166	cnot3a	96	95.133	Fundulus_heteroclitus
ENSORLG00015019021	cnot3b	100	78.549	ENSFHEG00000001696	cnot3b	100	79.358	Fundulus_heteroclitus
ENSORLG00015019021	cnot3b	57	60.861	ENSGAFG00000013094	cnot3a	100	66.164	Gambusia_affinis
ENSORLG00015019021	cnot3b	100	81.169	ENSGAFG00000003459	cnot3b	100	78.896	Gambusia_affinis
ENSORLG00015019021	cnot3b	68	86.861	ENSGACG00000009395	cnot3b	55	86.861	Gasterosteus_aculeatus
ENSORLG00015019021	cnot3b	80	70.336	ENSGAGG00000012677	CNOT3	87	90.826	Gopherus_agassizii
ENSORLG00015019021	cnot3b	71	76.702	ENSGGOG00000012996	CNOT3	75	91.803	Gorilla_gorilla
ENSORLG00015019021	cnot3b	99	72.737	ENSHBUG00000019699	cnot3b	99	71.444	Haplochromis_burtoni
ENSORLG00015019021	cnot3b	71	83.626	ENSHGLG00000008821	CNOT3	100	81.609	Heterocephalus_glaber_female
ENSORLG00015019021	cnot3b	59	84.231	ENSHGLG00100006181	CNOT3	100	81.609	Heterocephalus_glaber_male
ENSORLG00015019021	cnot3b	100	64.100	ENSIPUG00000000167	cnot3	100	63.290	Ictalurus_punctatus
ENSORLG00015019021	cnot3b	67	92.105	ENSSTOG00000028248	CNOT3	72	91.803	Ictidomys_tridecemlineatus
ENSORLG00015019021	cnot3b	71	84.795	ENSJJAG00000014594	Cnot3	100	81.609	Jaculus_jaculus
ENSORLG00015019021	cnot3b	77	81.592	ENSKMAG00000004863	cnot3a	70	88.462	Kryptolebias_marmoratus
ENSORLG00015019021	cnot3b	100	81.701	ENSKMAG00000018723	cnot3b	100	81.075	Kryptolebias_marmoratus
ENSORLG00015019021	cnot3b	96	77.802	ENSLBEG00000018278	cnot3b	99	77.207	Labrus_bergylta
ENSORLG00015019021	cnot3b	51	90.157	ENSLBEG00000017296	cnot3a	91	90.157	Labrus_bergylta
ENSORLG00015019021	cnot3b	68	91.447	ENSLACG00000009742	CNOT3	75	90.554	Latimeria_chalumnae
ENSORLG00015019021	cnot3b	54	95.752	ENSLOCG00000000005	cnot3b	79	95.752	Lepisosteus_oculatus
ENSORLG00015019021	cnot3b	67	91.148	ENSLAFG00000022133	CNOT3	72	90.850	Loxodonta_africana
ENSORLG00015019021	cnot3b	71	84.211	ENSMFAG00000040073	CNOT3	72	91.803	Macaca_fascicularis
ENSORLG00015019021	cnot3b	60	92.437	ENSMMUG00000009698	CNOT3	100	98.039	Macaca_mulatta
ENSORLG00015019021	cnot3b	71	84.211	ENSMNEG00000036750	CNOT3	72	91.803	Macaca_nemestrina
ENSORLG00015019021	cnot3b	71	84.211	ENSMLEG00000036579	CNOT3	71	91.803	Mandrillus_leucophaeus
ENSORLG00015019021	cnot3b	100	81.489	ENSMAMG00000019357	cnot3b	100	82.441	Mastacembelus_armatus
ENSORLG00015019021	cnot3b	100	81.525	ENSMZEG00005002466	cnot3b	100	81.418	Maylandia_zebra
ENSORLG00015019021	cnot3b	71	84.548	ENSMAUG00000014996	Cnot3	72	92.131	Mesocricetus_auratus
ENSORLG00015019021	cnot3b	100	64.339	ENSMMOG00000016446	cnot3a	89	89.381	Mola_mola
ENSORLG00015019021	cnot3b	69	93.590	ENSMMOG00000013086	cnot3b	71	93.805	Mola_mola
ENSORLG00015019021	cnot3b	68	77.824	ENSMODG00000004066	CNOT3	72	91.803	Monodelphis_domestica
ENSORLG00015019021	cnot3b	70	93.151	ENSMALG00000004936	cnot3b	92	93.151	Monopterus_albus
ENSORLG00015019021	cnot3b	71	84.840	MGP_CAROLIEiJ_G0029095	Cnot3	100	97.000	Mus_caroli
ENSORLG00015019021	cnot3b	71	84.840	ENSMUSG00000035632	Cnot3	100	97.000	Mus_musculus
ENSORLG00015019021	cnot3b	71	84.548	MGP_PahariEiJ_G0020964	Cnot3	100	97.000	Mus_pahari
ENSORLG00015019021	cnot3b	71	84.840	MGP_SPRETEiJ_G0030148	Cnot3	100	97.000	Mus_spretus
ENSORLG00015019021	cnot3b	76	77.487	ENSMPUG00000010352	CNOT3	72	91.803	Mustela_putorius_furo
ENSORLG00015019021	cnot3b	71	84.211	ENSNGAG00000013266	Cnot3	72	91.803	Nannospalax_galili
ENSORLG00015019021	cnot3b	85	82.085	ENSNBRG00000003336	cnot3b	97	91.284	Neolamprologus_brichardi
ENSORLG00015019021	cnot3b	76	76.702	ENSNLEG00000006272	CNOT3	69	91.803	Nomascus_leucogenys
ENSORLG00015019021	cnot3b	50	100.000	ENSOPRG00000001605	-	59	100.000	Ochotona_princeps
ENSORLG00015019021	cnot3b	75	77.249	ENSODEG00000000705	CNOT3	100	89.873	Octodon_degus
ENSORLG00015019021	cnot3b	100	81.935	ENSONIG00000007047	cnot3b	100	81.916	Oreochromis_niloticus
ENSORLG00015019021	cnot3b	71	84.503	ENSOCUG00000007691	CNOT3	72	91.803	Oryctolagus_cuniculus
ENSORLG00015019021	cnot3b	100	98.470	ENSORLG00000005982	cnot3b	100	98.470	Oryzias_latipes
ENSORLG00015019021	cnot3b	57	61.122	ENSORLG00000011174	cnot3a	100	66.630	Oryzias_latipes
ENSORLG00015019021	cnot3b	100	98.687	ENSORLG00020005779	cnot3b	100	98.687	Oryzias_latipes_hni
ENSORLG00015019021	cnot3b	57	60.928	ENSORLG00020008009	cnot3a	100	66.630	Oryzias_latipes_hni
ENSORLG00015019021	cnot3b	100	92.148	ENSOMEG00000015557	cnot3b	100	91.930	Oryzias_melastigma
ENSORLG00015019021	cnot3b	89	84.746	ENSOMEG00000010309	cnot3a	100	66.241	Oryzias_melastigma
ENSORLG00015019021	cnot3b	77	75.573	ENSOGAG00000006945	CNOT3	71	91.803	Otolemur_garnettii
ENSORLG00015019021	cnot3b	71	76.702	ENSPPAG00000002748	CNOT3	75	91.803	Pan_paniscus
ENSORLG00015019021	cnot3b	76	77.487	ENSPPRG00000011705	CNOT3	72	91.803	Panthera_pardus
ENSORLG00015019021	cnot3b	61	92.282	ENSPTIG00000008781	CNOT3	91	92.282	Panthera_tigris_altaica
ENSORLG00015019021	cnot3b	71	76.702	ENSPTRG00000046717	-	75	91.803	Pan_troglodytes
ENSORLG00015019021	cnot3b	71	76.702	ENSPTRG00000011444	CNOT3	75	91.803	Pan_troglodytes
ENSORLG00015019021	cnot3b	71	84.211	ENSPANG00000009375	CNOT3	72	91.803	Papio_anubis
ENSORLG00015019021	cnot3b	100	66.736	ENSPKIG00000011733	CNOT3	69	61.359	Paramormyrops_kingsleyae
ENSORLG00015019021	cnot3b	67	97.009	ENSPKIG00000015967	-	98	97.345	Paramormyrops_kingsleyae
ENSORLG00015019021	cnot3b	98	68.000	ENSPMGG00000022539	cnot3b	99	67.735	Periophthalmus_magnuspinnatus
ENSORLG00015019021	cnot3b	71	84.840	ENSPEMG00000024185	Cnot3	72	92.131	Peromyscus_maniculatus_bairdii
ENSORLG00015019021	cnot3b	74	79.834	ENSPCIG00000023018	CNOT3	89	91.475	Phascolarctos_cinereus
ENSORLG00015019021	cnot3b	85	72.573	ENSPFOG00000008693	cnot3a	71	87.500	Poecilia_formosa
ENSORLG00015019021	cnot3b	100	81.020	ENSPFOG00000007168	cnot3b	100	81.514	Poecilia_formosa
ENSORLG00015019021	cnot3b	100	81.020	ENSPLAG00000013457	cnot3b	100	81.514	Poecilia_latipinna
ENSORLG00015019021	cnot3b	100	82.143	ENSPMEG00000010184	cnot3b	100	81.169	Poecilia_mexicana
ENSORLG00015019021	cnot3b	99	75.858	ENSPREG00000000662	cnot3b	97	76.243	Poecilia_reticulata
ENSORLG00015019021	cnot3b	67	94.017	ENSPREG00000007592	cnot3a	100	88.281	Poecilia_reticulata
ENSORLG00015019021	cnot3b	50	67.841	ENSPREG00000000766	-	96	70.833	Poecilia_reticulata
ENSORLG00015019021	cnot3b	76	76.440	ENSPPYG00000010372	CNOT3	71	91.475	Pongo_abelii
ENSORLG00015019021	cnot3b	55	94.068	ENSPCAG00000011999	CNOT3	56	94.068	Procavia_capensis
ENSORLG00015019021	cnot3b	67	92.105	ENSPCOG00000017673	CNOT3	74	91.803	Propithecus_coquereli
ENSORLG00015019021	cnot3b	76	76.702	ENSPVAG00000015564	CNOT3	70	90.820	Pteropus_vampyrus
ENSORLG00015019021	cnot3b	99	73.276	ENSPNYG00000003358	cnot3b	99	72.845	Pundamilia_nyererei
ENSORLG00015019021	cnot3b	54	84.532	ENSPNAG00000017679	cnot3a	63	93.333	Pygocentrus_nattereri
ENSORLG00015019021	cnot3b	100	71.690	ENSPNAG00000027459	cnot3b	100	71.926	Pygocentrus_nattereri
ENSORLG00015019021	cnot3b	71	84.548	ENSRNOG00000053234	Cnot3	72	92.131	Rattus_norvegicus
ENSORLG00015019021	cnot3b	75	76.720	ENSRBIG00000031025	CNOT3	72	91.803	Rhinopithecus_bieti
ENSORLG00015019021	cnot3b	75	76.984	ENSRROG00000003872	CNOT3	73	91.803	Rhinopithecus_roxellana
ENSORLG00015019021	cnot3b	70	86.228	ENSSBOG00000030268	CNOT3	75	91.803	Saimiri_boliviensis_boliviensis
ENSORLG00015019021	cnot3b	100	71.398	ENSSFOG00015000248	cnot3	57	60.108	Scleropages_formosus
ENSORLG00015019021	cnot3b	100	71.444	ENSSFOG00015019203	-	55	65.310	Scleropages_formosus
ENSORLG00015019021	cnot3b	100	78.155	ENSSMAG00000016031	cnot3b	100	79.851	Scophthalmus_maximus
ENSORLG00015019021	cnot3b	100	82.909	ENSSDUG00000003428	cnot3b	100	82.585	Seriola_dumerili
ENSORLG00015019021	cnot3b	83	94.068	ENSSDUG00000008181	cnot3a	60	58.961	Seriola_dumerili
ENSORLG00015019021	cnot3b	100	82.696	ENSSLDG00000014376	cnot3b	100	82.372	Seriola_lalandi_dorsalis
ENSORLG00015019021	cnot3b	77	77.387	ENSSPUG00000008510	CNOT3	75	91.803	Sphenodon_punctatus
ENSORLG00015019021	cnot3b	85	90.945	ENSSPAG00000003858	cnot3a	57	90.945	Stegastes_partitus
ENSORLG00015019021	cnot3b	100	82.711	ENSSPAG00000001429	cnot3b	100	82.814	Stegastes_partitus
ENSORLG00015019021	cnot3b	67	92.105	ENSSSCG00000003264	CNOT3	71	91.803	Sus_scrofa
ENSORLG00015019021	cnot3b	80	73.948	ENSTRUG00000007248	cnot3b	91	90.722	Takifugu_rubripes
ENSORLG00015019021	cnot3b	76	77.487	ENSUAMG00000005234	CNOT3	72	92.131	Ursus_americanus
ENSORLG00015019021	cnot3b	67	82.267	ENSUMAG00000010934	CNOT3	86	91.339	Ursus_maritimus
ENSORLG00015019021	cnot3b	75	77.225	ENSVVUG00000008239	CNOT3	70	91.803	Vulpes_vulpes
ENSORLG00015019021	cnot3b	100	57.460	ENSXETG00000003166	cnot3	75	90.615	Xenopus_tropicalis
ENSORLG00015019021	cnot3b	96	75.839	ENSXCOG00000018976	cnot3b	99	75.615	Xiphophorus_couchianus
ENSORLG00015019021	cnot3b	100	81.297	ENSXMAG00000014176	cnot3b	100	81.210	Xiphophorus_maculatus