EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015019057 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 3966 bases
Position: chr11:14944104-14948069
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015018013	zf-C2H2	PF00096.26	2e-35	1	6
ENSORLP00015018013	zf-C2H2	PF00096.26	2e-35	2	6
ENSORLP00015018013	zf-C2H2	PF00096.26	2e-35	3	6
ENSORLP00015018013	zf-C2H2	PF00096.26	2e-35	4	6
ENSORLP00015018013	zf-C2H2	PF00096.26	2e-35	5	6
ENSORLP00015018013	zf-C2H2	PF00096.26	2e-35	6	6
ENSORLP00015018013	zf-met	PF12874.7	2.5e-05	1	2
ENSORLP00015018013	zf-met	PF12874.7	2.5e-05	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015026606	-	3966	-	ENSORLP00015018013	1321 (aa)	-	-

Gene Model

Click here to download ENSORLG00015019057's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015019057's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015019057	-	54	47.561	ENSORLG00015007200	ZNF319	91	47.561

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015019057	-	99	81.097	ENSAPOG00000014819	-	98	82.805	Acanthochromis_polyacanthus
ENSORLG00015019057	-	98	77.242	ENSCSEG00000016863	-	98	77.321	Cynoglossus_semilaevis
ENSORLG00015019057	-	100	78.821	ENSCVAG00000022101	-	100	78.967	Cyprinodon_variegatus
ENSORLG00015019057	-	97	73.720	ENSHCOG00000018630	-	98	74.102	Hippocampus_comes
ENSORLG00015019057	-	65	80.067	ENSKMAG00000018789	-	100	78.978	Kryptolebias_marmoratus
ENSORLG00015019057	-	62	80.305	ENSMMOG00000013085	-	98	80.329	Mola_mola
ENSORLG00015019057	-	100	78.829	ENSONIG00000007045	-	100	90.674	Oreochromis_niloticus
ENSORLG00015019057	-	97	79.939	ENSPFOG00000007425	-	99	80.334	Poecilia_formosa
ENSORLG00015019057	-	100	78.505	ENSPLAG00000013476	-	100	78.736	Poecilia_latipinna
ENSORLG00015019057	-	100	76.630	ENSPMEG00000010070	-	100	78.063	Poecilia_mexicana
ENSORLG00015019057	-	90	54.412	ENSSFOG00015000866	si:dkeyp-69b9.6	81	54.495	Scleropages_formosus
ENSORLG00015019057	-	65	77.964	ENSSMAG00000016019	-	100	79.051	Scophthalmus_maximus
ENSORLG00015019057	-	62	81.557	ENSSPAG00000001452	-	97	86.475	Stegastes_partitus