EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSORLG00015019063 (Gene tree)
Gene ID
-
Gene Symbol
SRL (1 of many)
Alias
-
Full Name
sarcalumenin
Gene Type
protein_coding
Species
Oryzias_latipes_hsok
Status
putative
Strand
Plus strand
Length
28171 bases
Position
chr1:36899848-36928018
Accession
11295
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00015018005MMR_HSR1PF01926.237.3e-0911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00015034969SRL (1 of many)-2011359-ENSORLP00015018005452 (aa)--
ENSORLT00015034973SRL (1 of many)-2025348-ENSORLP00015033573666 (aa)--
Gene Model
Click here to download ENSORLG00015019063's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015019063's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSORLG00015019063SRL8631.959ENSORLG00015020872ehd46831.959
ENSORLG00015019063SRL8632.990ENSORLG00015017672ehd1a7032.990
ENSORLG00015019063SRL8232.708ENSORLG00015020550ehd37032.908
ENSORLG00015019063SRL8733.249ENSORLG00015005729ehd27033.249
ENSORLG00015019063SRL9775.169ENSORLG00015009342srl9175.169
ENSORLG00015019063SRL8732.570ENSORLG00015021510-6932.570
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00015019063SRL9974.009ENSG00000185739SRL9976.000Homo_sapiens
ENSORLG00015019063SRL9775.621ENSAPOG00000018093srl9975.455Acanthochromis_polyacanthus
ENSORLG00015019063SRL9888.739ENSAPOG00000012432SRL9988.739Acanthochromis_polyacanthus
ENSORLG00015019063SRL9775.169ENSAMEG00000010862SRL5075.169Ailuropoda_melanoleuca
ENSORLG00015019063SRL9776.072ENSACIG00000015799srl9876.072Amphilophus_citrinellus
ENSORLG00015019063SRL9887.640ENSACIG00000015419SRL10087.640Amphilophus_citrinellus
ENSORLG00015019063SRL9887.305ENSAOCG00000017049SRL9887.305Amphiprion_ocellaris
ENSORLG00015019063SRL9475.638ENSAOCG00000007574srl9975.638Amphiprion_ocellaris
ENSORLG00015019063SRL10081.938ENSAPEG00000006533SRL9981.481Amphiprion_percula
ENSORLG00015019063SRL9775.395ENSAPEG00000006911srl9475.395Amphiprion_percula
ENSORLG00015019063SRL9775.225ENSATEG00000024315srl9475.395Anabas_testudineus
ENSORLG00015019063SRL9984.914ENSATEG00000009643SRL5384.914Anabas_testudineus
ENSORLG00015019063SRL9673.068ENSACAG00000016380SRL8473.026Anolis_carolinensis
ENSORLG00015019063SRL9883.801ENSACLG00000024674SRL5784.416Astatotilapia_calliptera
ENSORLG00015019063SRL9775.395ENSACLG00000027685srl9775.395Astatotilapia_calliptera
ENSORLG00015019063SRL9776.159ENSAMXG00000038693SRL10076.380Astyanax_mexicanus
ENSORLG00015019063SRL9776.298ENSAMXG00000018789srl8776.298Astyanax_mexicanus
ENSORLG00015019063SRL9775.395ENSBTAG00000001078SRL5675.395Bos_taurus
ENSORLG00015019063SRL9775.339ENSCJAG00000019750SRL9673.846Callithrix_jacchus
ENSORLG00015019063SRL9974.558ENSCAFG00000019233SRL8375.000Canis_familiaris
ENSORLG00015019063SRL9775.169ENSCAFG00020025024SRL5575.169Canis_lupus_dingo
ENSORLG00015019063SRL9775.395ENSCHIG00000017927SRL5575.395Capra_hircus
ENSORLG00015019063SRL9974.614ENSTSYG00000007919SRL9976.526Carlito_syrichta
ENSORLG00015019063SRL9874.501ENSCPOG00000012643SRL9674.501Cavia_porcellus
ENSORLG00015019063SRL9771.882ENSCCAG00000032646SRL10077.573Cebus_capucinus
ENSORLG00015019063SRL9974.336ENSCATG00000032227-9674.009Cercocebus_atys
ENSORLG00015019063SRL9874.945ENSCLAG00000016242SRL9674.945Chinchilla_lanigera
ENSORLG00015019063SRL8478.961ENSCHOG00000001618SRL5278.961Choloepus_hoffmanni
ENSORLG00015019063SRL9978.351ENSCPBG00000026371SRL9672.138Chrysemys_picta_bellii
ENSORLG00015019063SRL9356.429ENSCING00000005231-9456.429Ciona_intestinalis
ENSORLG00015019063SRL9973.789ENSCANG00000035872SRL9976.000Colobus_angolensis_palliatus
ENSORLG00015019063SRL9973.742ENSCGRG00001016630Srl9674.501Cricetulus_griseus_chok1gshd
ENSORLG00015019063SRL9973.742ENSCGRG00000005458Srl9674.501Cricetulus_griseus_crigri
ENSORLG00015019063SRL9775.169ENSCSEG00000016151srl9575.169Cynoglossus_semilaevis
ENSORLG00015019063SRL9981.838ENSCSEG00000011866SRL9281.838Cynoglossus_semilaevis
ENSORLG00015019063SRL9776.244ENSCVAG00000003513srl9676.244Cyprinodon_variegatus
ENSORLG00015019063SRL9886.710ENSCVAG00000022465SRL6186.710Cyprinodon_variegatus
ENSORLG00015019063SRL8382.552ENSDARG00000112959CABZ01072309.110082.552Danio_rerio
ENSORLG00015019063SRL9777.252ENSDARG00000104587srl9477.252Danio_rerio
ENSORLG00015019063SRL9774.718ENSDNOG00000011643SRL5374.718Dasypus_novemcinctus
ENSORLG00015019063SRL9774.775ENSDORG00000014807Srl9474.775Dipodomys_ordii
ENSORLG00015019063SRL7965.266ENSEBUG00000015937srl9065.266Eptatretus_burgeri
ENSORLG00015019063SRL9775.621ENSEASG00005000942SRL5375.621Equus_asinus_asinus
ENSORLG00015019063SRL9974.449ENSECAG00000024219SRL9475.621Equus_caballus
ENSORLG00015019063SRL9873.319ENSELUG00000015616srl9573.319Esox_lucius
ENSORLG00015019063SRL9775.566ENSFCAG00000022075SRL9375.566Felis_catus
ENSORLG00015019063SRL9875.391ENSFALG00000004328SRL6375.391Ficedula_albicollis
ENSORLG00015019063SRL9874.723ENSFDAG00000006199SRL9674.723Fukomys_damarensis
ENSORLG00015019063SRL9775.847ENSFHEG00000011239srl9675.847Fundulus_heteroclitus
ENSORLG00015019063SRL9888.764ENSFHEG00000011854SRL10088.764Fundulus_heteroclitus
ENSORLG00015019063SRL9773.568ENSGMOG00000014954srl10073.568Gadus_morhua
ENSORLG00015019063SRL9874.720ENSGALG00000038884SRL9574.720Gallus_gallus
ENSORLG00015019063SRL9889.865ENSGAFG00000016984SRL9989.865Gambusia_affinis
ENSORLG00015019063SRL9776.072ENSGAFG00000000010srl9676.072Gambusia_affinis
ENSORLG00015019063SRL9773.407ENSGACG00000011332srl10073.407Gasterosteus_aculeatus
ENSORLG00015019063SRL9974.336ENSGGOG00000011312-9674.009Gorilla_gorilla
ENSORLG00015019063SRL9884.017ENSHBUG00000015710SRL5784.632Haplochromis_burtoni
ENSORLG00015019063SRL9775.395ENSHBUG00000007581srl9775.395Haplochromis_burtoni
ENSORLG00015019063SRL9874.723ENSHGLG00000015271SRL9674.723Heterocephalus_glaber_female
ENSORLG00015019063SRL9874.723ENSHGLG00100019378SRL9674.723Heterocephalus_glaber_male
ENSORLG00015019063SRL9783.991ENSHCOG00000001012SRL5083.991Hippocampus_comes
ENSORLG00015019063SRL9775.169ENSHCOG00000008687srl9875.000Hippocampus_comes
ENSORLG00015019063SRL9771.616ENSIPUG00000011609SRL10071.616Ictalurus_punctatus
ENSORLG00015019063SRL9776.126ENSIPUG00000012513srl9576.126Ictalurus_punctatus
ENSORLG00015019063SRL9974.779ENSSTOG00000021151-9674.945Ictidomys_tridecemlineatus
ENSORLG00015019063SRL9874.945ENSJJAG00000016400Srl9674.945Jaculus_jaculus
ENSORLG00015019063SRL9677.598ENSKMAG00000014115srl9278.282Kryptolebias_marmoratus
ENSORLG00015019063SRL9690.389ENSKMAG00000019537SRL10090.389Kryptolebias_marmoratus
ENSORLG00015019063SRL9986.534ENSLBEG00000013811SRL9886.534Labrus_bergylta
ENSORLG00015019063SRL9874.554ENSLBEG00000026643srl9574.554Labrus_bergylta
ENSORLG00015019063SRL9873.154ENSLACG00000002825SRL9973.154Latimeria_chalumnae
ENSORLG00015019063SRL9875.670ENSLOCG00000002644srl9675.670Lepisosteus_oculatus
ENSORLG00015019063SRL9675.283ENSLAFG00000006329SRL5075.283Loxodonta_africana
ENSORLG00015019063SRL9376.000ENSMFAG00000037383SRL9976.000Macaca_fascicularis
ENSORLG00015019063SRL10073.362ENSMNEG00000019236-9773.362Macaca_nemestrina
ENSORLG00015019063SRL9968.874ENSMLEG00000032156SRL9668.722Mandrillus_leucophaeus
ENSORLG00015019063SRL9984.549ENSMAMG00000013756SRL5484.549Mastacembelus_armatus
ENSORLG00015019063SRL9775.225ENSMAMG00000023322srl9475.225Mastacembelus_armatus
ENSORLG00015019063SRL9883.801ENSMZEG00005004010SRL5884.416Maylandia_zebra
ENSORLG00015019063SRL9775.395ENSMZEG00005004548srl9775.395Maylandia_zebra
ENSORLG00015019063SRL9874.720ENSMGAG00000009342SRL9577.984Meleagris_gallopavo
ENSORLG00015019063SRL9974.286ENSMICG00000032307SRL9375.792Microcebus_murinus
ENSORLG00015019063SRL9874.058ENSMOCG00000008208Srl9674.058Microtus_ochrogaster
ENSORLG00015019063SRL9874.777ENSMMOG00000013970srl9974.777Mola_mola
ENSORLG00015019063SRL9784.061ENSMMOG00000021572SRL9984.061Mola_mola
ENSORLG00015019063SRL9975.276ENSMODG00000016380-5175.110Monodelphis_domestica
ENSORLG00015019063SRL9287.470ENSMALG00000000670SRL9887.470Monopterus_albus
ENSORLG00015019063SRL9774.661ENSMALG00000005039srl9874.661Monopterus_albus
ENSORLG00015019063SRL9875.446MGP_CAROLIEiJ_G0020400Srl9575.278Mus_caroli
ENSORLG00015019063SRL9875.446ENSMUSG00000022519Srl9575.278Mus_musculus
ENSORLG00015019063SRL9875.446MGP_SPRETEiJ_G0021294Srl9575.278Mus_spretus
ENSORLG00015019063SRL9775.169ENSMPUG00000015025SRL5375.510Mustela_putorius_furo
ENSORLG00015019063SRL9775.847ENSMLUG00000030733SRL5675.847Myotis_lucifugus
ENSORLG00015019063SRL9974.779ENSNGAG00000019741Srl9674.779Nannospalax_galili
ENSORLG00015019063SRL9883.333ENSNBRG00000002422SRL6181.876Neolamprologus_brichardi
ENSORLG00015019063SRL9775.395ENSNBRG00000023775srl9475.395Neolamprologus_brichardi
ENSORLG00015019063SRL9870.824ENSNLEG00000029051SRL9570.667Nomascus_leucogenys
ENSORLG00015019063SRL9969.584ENSOPRG00000000477-5469.584Ochotona_princeps
ENSORLG00015019063SRL9975.221ENSODEG00000013256SRL9675.221Octodon_degus
ENSORLG00015019063SRL9775.169ENSONIG00000005192srl9475.169Oreochromis_niloticus
ENSORLG00015019063SRL9775.395ENSORLG00000008291srl9376.904Oryzias_latipes
ENSORLG00015019063SRL10099.115ENSORLG00000015064SRL10099.115Oryzias_latipes
ENSORLG00015019063SRL9775.225ENSORLG00020019784srl8176.904Oryzias_latipes_hni
ENSORLG00015019063SRL10099.115ENSORLG00020018173SRL10099.115Oryzias_latipes_hni
ENSORLG00015019063SRL9893.709ENSOMEG00000005682SRL5493.709Oryzias_melastigma
ENSORLG00015019063SRL9775.621ENSOMEG00000010006srl9775.626Oryzias_melastigma
ENSORLG00015019063SRL9675.283ENSOGAG00000029266SRL5475.283Otolemur_garnettii
ENSORLG00015019063SRL9775.395ENSOARG00000003074SRL5675.395Ovis_aries
ENSORLG00015019063SRL9974.009ENSPPAG00000024919-9976.000Pan_paniscus
ENSORLG00015019063SRL9775.566ENSPPRG00000010274SRL9976.526Panthera_pardus
ENSORLG00015019063SRL9775.566ENSPTIG00000015162SRL9976.526Panthera_tigris_altaica
ENSORLG00015019063SRL9974.009ENSPTRG00000007712SRL9976.000Pan_troglodytes
ENSORLG00015019063SRL9973.523ENSPANG00000013804SRL9873.362Papio_anubis
ENSORLG00015019063SRL9973.836ENSPKIG00000024974SRL9073.836Paramormyrops_kingsleyae
ENSORLG00015019063SRL9777.477ENSPKIG00000006405srl9477.477Paramormyrops_kingsleyae
ENSORLG00015019063SRL9774.492ENSPSIG00000008586SRL5074.492Pelodiscus_sinensis
ENSORLG00015019063SRL9785.388ENSPMGG00000023505-9985.388Periophthalmus_magnuspinnatus
ENSORLG00015019063SRL9874.720ENSPMGG00000021081srl9674.720Periophthalmus_magnuspinnatus
ENSORLG00015019063SRL9874.723ENSPEMG00000015842Srl9674.723Peromyscus_maniculatus_bairdii
ENSORLG00015019063SRL9164.434ENSPMAG00000004786srl9964.434Petromyzon_marinus
ENSORLG00015019063SRL9875.839ENSPCIG00000012128SRL9875.839Phascolarctos_cinereus
ENSORLG00015019063SRL9774.286ENSPFOG00000011408srl9474.123Poecilia_formosa
ENSORLG00015019063SRL9776.072ENSPLAG00000008017srl9676.072Poecilia_latipinna
ENSORLG00015019063SRL9889.213ENSPLAG00000002932SRL9989.213Poecilia_latipinna
ENSORLG00015019063SRL9776.072ENSPMEG00000006745srl9676.072Poecilia_mexicana
ENSORLG00015019063SRL9985.560ENSPMEG00000005890SRL6185.991Poecilia_mexicana
ENSORLG00015019063SRL9775.847ENSPREG00000007751srl9875.847Poecilia_reticulata
ENSORLG00015019063SRL9889.888ENSPREG00000000315SRL9989.888Poecilia_reticulata
ENSORLG00015019063SRL9475.234ENSPPYG00000007053SRL9975.234Pongo_abelii
ENSORLG00015019063SRL9675.057ENSPCAG00000003378-5075.057Procavia_capensis
ENSORLG00015019063SRL9973.789ENSPCOG00000023135SRL9976.056Propithecus_coquereli
ENSORLG00015019063SRL9775.395ENSPVAG00000006586SRL5475.395Pteropus_vampyrus
ENSORLG00015019063SRL9883.801ENSPNYG00000003423SRL5784.416Pundamilia_nyererei
ENSORLG00015019063SRL9775.395ENSPNYG00000001200srl9775.395Pundamilia_nyererei
ENSORLG00015019063SRL9879.596ENSPNAG00000007361-9279.596Pygocentrus_nattereri
ENSORLG00015019063SRL9775.225ENSPNAG00000023106srl9475.225Pygocentrus_nattereri
ENSORLG00015019063SRL9974.179ENSRNOG00000005269Srl5174.179Rattus_norvegicus
ENSORLG00015019063SRL9974.336ENSRBIG00000042358SRL5074.336Rhinopithecus_bieti
ENSORLG00015019063SRL9775.339ENSSBOG00000029273SRL9673.846Saimiri_boliviensis_boliviensis
ENSORLG00015019063SRL9975.388ENSSHAG00000011715-5175.388Sarcophilus_harrisii
ENSORLG00015019063SRL9775.566ENSSFOG00015021327SRL5074.444Scleropages_formosus
ENSORLG00015019063SRL9776.126ENSSFOG00015009773srl9576.126Scleropages_formosus
ENSORLG00015019063SRL9974.505ENSSMAG00000016274srl9974.505Scophthalmus_maximus
ENSORLG00015019063SRL9885.466ENSSMAG00000002232SRL5085.466Scophthalmus_maximus
ENSORLG00015019063SRL9887.111ENSSDUG00000009161SRL9987.111Seriola_dumerili
ENSORLG00015019063SRL9775.000ENSSDUG00000010808srl9875.000Seriola_dumerili
ENSORLG00015019063SRL9775.169ENSSLDG00000022024srl9675.169Seriola_lalandi_dorsalis
ENSORLG00015019063SRL9786.813ENSSLDG00000014601SRL9986.813Seriola_lalandi_dorsalis
ENSORLG00015019063SRL9874.330ENSSPUG00000016859SRL9974.330Sphenodon_punctatus
ENSORLG00015019063SRL9888.288ENSSPAG00000014254SRL9988.288Stegastes_partitus
ENSORLG00015019063SRL9775.113ENSSPAG00000019105srl9475.113Stegastes_partitus
ENSORLG00015019063SRL9775.395ENSSSCG00000007949SRL9975.395Sus_scrofa
ENSORLG00015019063SRL8079.558ENSTGUG00000016121-10079.558Taeniopygia_guttata
ENSORLG00015019063SRL9875.391ENSTGUG00000003951-9875.391Taeniopygia_guttata
ENSORLG00015019063SRL9775.621ENSTRUG00000006005srl9475.621Takifugu_rubripes
ENSORLG00015019063SRL9486.353ENSTRUG00000013310SRL5686.353Takifugu_rubripes
ENSORLG00015019063SRL9775.395ENSTNIG00000009739srl9475.395Tetraodon_nigroviridis
ENSORLG00015019063SRL9775.395ENSUAMG00000005701SRL5575.395Ursus_americanus
ENSORLG00015019063SRL9775.169ENSUMAG00000002574SRL5575.169Ursus_maritimus
ENSORLG00015019063SRL9874.777ENSXETG00000017313srl9974.777Xenopus_tropicalis
ENSORLG00015019063SRL9277.751ENSXCOG00000010424srl9677.751Xiphophorus_couchianus
ENSORLG00015019063SRL9889.640ENSXCOG00000014584SRL9989.640Xiphophorus_couchianus
ENSORLG00015019063SRL9886.117ENSXMAG00000027598SRL6386.768Xiphophorus_maculatus
ENSORLG00015019063SRL9775.847ENSXMAG00000004625srl9075.847Xiphophorus_maculatus

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