EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015019126 (Gene tree)
Gene ID: -
Gene Symbol: chd9
Alias: -
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 76838 bases
Position: chr3:29309002-29385839
Accession: 101162589
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015017907	ResIII	PF04851.15	8.2e-06	1	1
ENSORLP00015033504	ResIII	PF04851.15	8.3e-06	1	1
ENSORLP00015017974	ResIII	PF04851.15	9.1e-06	1	1
ENSORLP00015017907	BRK	PF07533.16	7e-32	1	2
ENSORLP00015017907	BRK	PF07533.16	7e-32	2	2
ENSORLP00015033504	BRK	PF07533.16	7.6e-32	1	2
ENSORLP00015033504	BRK	PF07533.16	7.6e-32	2	2
ENSORLP00015017974	BRK	PF07533.16	1.1e-31	1	2
ENSORLP00015017974	BRK	PF07533.16	1.1e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015026557	-	12626	XM_011493380	ENSORLP00015017974	3029 (aa)	XP_011491682	-
ENSORLT00015034933	-	7701	-	ENSORLP00015033504	2566 (aa)	-	-
ENSORLT00015026462	-	11439	XM_011493400	ENSORLP00015017907	2530 (aa)	XP_011491702	-

Gene Model

Click here to download ENSORLG00015019126's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015019126's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015019126	chd9	84	63.389	ENSORLG00015020858	chd7	57	61.559

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015019126	chd9	96	68.874	ENSG00000177200	CHD9	91	75.728	Homo_sapiens
ENSORLG00015019126	chd9	97	88.605	ENSAPOG00000023034	chd9	98	88.032	Acanthochromis_polyacanthus
ENSORLG00015019126	chd9	81	62.796	ENSAMEG00000016232	CHD9	84	70.741	Ailuropoda_melanoleuca
ENSORLG00015019126	chd9	94	83.956	ENSACIG00000004097	chd9	96	77.612	Amphilophus_citrinellus
ENSORLG00015019126	chd9	97	88.727	ENSAOCG00000005487	chd9	98	88.235	Amphiprion_ocellaris
ENSORLG00015019126	chd9	97	88.727	ENSAPEG00000009859	chd9	98	88.195	Amphiprion_percula
ENSORLG00015019126	chd9	95	90.240	ENSATEG00000002748	chd9	97	84.153	Anabas_testudineus
ENSORLG00015019126	chd9	94	70.642	ENSAPLG00000002826	CHD9	62	76.634	Anas_platyrhynchos
ENSORLG00015019126	chd9	81	62.688	ENSACAG00000016150	CHD9	83	70.008	Anolis_carolinensis
ENSORLG00015019126	chd9	96	60.861	ENSANAG00000015630	CHD9	92	70.139	Aotus_nancymaae
ENSORLG00015019126	chd9	97	84.587	ENSACLG00000016899	chd9	98	78.050	Astatotilapia_calliptera
ENSORLG00015019126	chd9	96	76.559	ENSAMXG00000005652	chd9	97	77.231	Astyanax_mexicanus
ENSORLG00015019126	chd9	81	62.301	ENSBTAG00000002287	CHD9	84	70.155	Bos_taurus
ENSORLG00015019126	chd9	94	68.978	ENSCJAG00000001573	CHD9	92	70.486	Callithrix_jacchus
ENSORLG00015019126	chd9	81	62.261	ENSCAFG00000009699	CHD9	85	71.025	Canis_familiaris
ENSORLG00015019126	chd9	81	62.261	ENSCAFG00020002879	CHD9	92	70.732	Canis_lupus_dingo
ENSORLG00015019126	chd9	99	60.262	ENSCHIG00000021000	CHD9	66	74.373	Capra_hircus
ENSORLG00015019126	chd9	81	62.700	ENSTSYG00000007693	CHD9	92	70.383	Carlito_syrichta
ENSORLG00015019126	chd9	78	54.902	ENSCAPG00000011604	CHD9	60	62.162	Cavia_aperea
ENSORLG00015019126	chd9	95	65.656	ENSCPOG00000036544	CHD9	84	65.973	Cavia_porcellus
ENSORLG00015019126	chd9	96	60.771	ENSCCAG00000036178	CHD9	92	70.732	Cebus_capucinus
ENSORLG00015019126	chd9	81	62.352	ENSCATG00000036753	CHD9	92	69.863	Cercocebus_atys
ENSORLG00015019126	chd9	94	69.431	ENSCLAG00000007137	CHD9	96	80.476	Chinchilla_lanigera
ENSORLG00015019126	chd9	81	62.386	ENSCSAG00000005311	CHD9	85	71.025	Chlorocebus_sabaeus
ENSORLG00015019126	chd9	70	91.667	ENSCHOG00000003935	CHD9	61	92.105	Choloepus_hoffmanni
ENSORLG00015019126	chd9	93	76.610	ENSCPBG00000012459	CHD9	85	79.066	Chrysemys_picta_bellii
ENSORLG00015019126	chd9	96	61.328	ENSCANG00000030349	CHD9	92	70.486	Colobus_angolensis_palliatus
ENSORLG00015019126	chd9	94	69.043	ENSCGRG00001016150	Chd9	84	69.971	Cricetulus_griseus_chok1gshd
ENSORLG00015019126	chd9	94	69.043	ENSCGRG00000012850	Chd9	99	77.642	Cricetulus_griseus_crigri
ENSORLG00015019126	chd9	96	85.065	ENSCSEG00000009209	chd9	96	83.689	Cynoglossus_semilaevis
ENSORLG00015019126	chd9	94	87.716	ENSCVAG00000016195	chd9	97	80.612	Cyprinodon_variegatus
ENSORLG00015019126	chd9	99	74.921	ENSDARG00000074498	chd9	97	76.695	Danio_rerio
ENSORLG00015019126	chd9	79	68.873	ENSDNOG00000006045	CHD9	97	70.334	Dasypus_novemcinctus
ENSORLG00015019126	chd9	78	69.567	ENSDORG00000008523	-	96	69.410	Dipodomys_ordii
ENSORLG00015019126	chd9	88	91.270	ENSETEG00000009565	CHD9	76	91.270	Echinops_telfairi
ENSORLG00015019126	chd9	86	77.079	ENSEASG00005014832	CHD9	94	79.736	Equus_asinus_asinus
ENSORLG00015019126	chd9	81	62.494	ENSECAG00000011505	CHD9	86	70.649	Equus_caballus
ENSORLG00015019126	chd9	79	85.652	ENSEEUG00000014515	CHD9	71	86.784	Erinaceus_europaeus
ENSORLG00015019126	chd9	90	77.187	ENSELUG00000006031	chd9	96	80.392	Esox_lucius
ENSORLG00015019126	chd9	81	62.318	ENSFCAG00000022534	CHD9	92	71.080	Felis_catus
ENSORLG00015019126	chd9	96	69.659	ENSFALG00000013276	CHD9	97	69.489	Ficedula_albicollis
ENSORLG00015019126	chd9	97	60.536	ENSFDAG00000021037	CHD9	85	69.231	Fukomys_damarensis
ENSORLG00015019126	chd9	96	88.468	ENSFHEG00000006068	chd9	97	87.536	Fundulus_heteroclitus
ENSORLG00015019126	chd9	78	85.027	ENSGMOG00000006040	chd9	81	85.027	Gadus_morhua
ENSORLG00015019126	chd9	92	71.271	ENSGALG00000039178	CHD9	86	71.742	Gallus_gallus
ENSORLG00015019126	chd9	97	87.637	ENSGAFG00000010014	chd9	98	87.318	Gambusia_affinis
ENSORLG00015019126	chd9	93	84.228	ENSGACG00000016694	chd9	84	84.326	Gasterosteus_aculeatus
ENSORLG00015019126	chd9	96	61.248	ENSGGOG00000014816	CHD9	92	70.139	Gorilla_gorilla
ENSORLG00015019126	chd9	97	85.922	ENSHBUG00000023322	chd9	98	86.321	Haplochromis_burtoni
ENSORLG00015019126	chd9	95	68.988	ENSHGLG00000014938	CHD9	96	80.476	Heterocephalus_glaber_female
ENSORLG00015019126	chd9	96	82.230	ENSHCOG00000000937	chd9	98	81.944	Hippocampus_comes
ENSORLG00015019126	chd9	98	76.660	ENSIPUG00000016448	chd9	96	77.741	Ictalurus_punctatus
ENSORLG00015019126	chd9	94	69.077	ENSSTOG00000022273	CHD9	99	77.137	Ictidomys_tridecemlineatus
ENSORLG00015019126	chd9	66	70.179	ENSJJAG00000015741	-	96	69.078	Jaculus_jaculus
ENSORLG00015019126	chd9	96	87.639	ENSKMAG00000016784	chd9	96	88.487	Kryptolebias_marmoratus
ENSORLG00015019126	chd9	96	88.177	ENSLBEG00000012077	chd9	96	87.808	Labrus_bergylta
ENSORLG00015019126	chd9	95	65.201	ENSLACG00000005557	CHD9	84	65.445	Latimeria_chalumnae
ENSORLG00015019126	chd9	98	74.890	ENSLOCG00000007225	chd9	98	74.634	Lepisosteus_oculatus
ENSORLG00015019126	chd9	81	61.987	ENSLAFG00000015374	CHD9	84	69.734	Loxodonta_africana
ENSORLG00015019126	chd9	81	62.341	ENSMFAG00000041354	CHD9	95	70.271	Macaca_fascicularis
ENSORLG00015019126	chd9	81	62.341	ENSMMUG00000016310	CHD9	92	70.486	Macaca_mulatta
ENSORLG00015019126	chd9	85	71.077	ENSMNEG00000031494	CHD9	95	71.012	Macaca_nemestrina
ENSORLG00015019126	chd9	81	62.432	ENSMLEG00000043219	CHD9	92	70.486	Mandrillus_leucophaeus
ENSORLG00015019126	chd9	95	89.141	ENSMAMG00000003909	chd9	98	82.199	Mastacembelus_armatus
ENSORLG00015019126	chd9	97	87.662	ENSMZEG00005006581	chd9	98	87.859	Maylandia_zebra
ENSORLG00015019126	chd9	94	66.034	ENSMGAG00000004642	CHD9	59	72.568	Meleagris_gallopavo
ENSORLG00015019126	chd9	81	62.586	ENSMICG00000016679	CHD9	92	70.732	Microcebus_murinus
ENSORLG00015019126	chd9	94	84.005	ENSMMOG00000016406	chd9	97	76.339	Mola_mola
ENSORLG00015019126	chd9	87	63.356	ENSMODG00000013142	-	95	77.234	Monodelphis_domestica
ENSORLG00015019126	chd9	94	86.468	ENSMALG00000013306	chd9	97	77.583	Monopterus_albus
ENSORLG00015019126	chd9	99	61.585	MGP_CAROLIEiJ_G0031364	Chd9	84	69.479	Mus_caroli
ENSORLG00015019126	chd9	94	68.856	ENSMUSG00000056608	Chd9	99	76.615	Mus_musculus
ENSORLG00015019126	chd9	95	66.694	MGP_PahariEiJ_G0022964	Chd9	85	69.267	Mus_pahari
ENSORLG00015019126	chd9	99	61.590	MGP_SPRETEiJ_G0032483	Chd9	84	69.270	Mus_spretus
ENSORLG00015019126	chd9	81	62.432	ENSMPUG00000003285	CHD9	85	71.294	Mustela_putorius_furo
ENSORLG00015019126	chd9	94	68.822	ENSMLUG00000004456	CHD9	84	69.569	Myotis_lucifugus
ENSORLG00015019126	chd9	97	87.055	ENSNBRG00000009423	chd9	98	87.252	Neolamprologus_brichardi
ENSORLG00015019126	chd9	85	71.180	ENSNLEG00000001026	CHD9	85	72.199	Nomascus_leucogenys
ENSORLG00015019126	chd9	72	95.489	ENSMEUG00000008222	-	74	88.125	Notamacropus_eugenii
ENSORLG00015019126	chd9	55	95.489	ENSOPRG00000011168	CHD9	71	86.034	Ochotona_princeps
ENSORLG00015019126	chd9	95	69.158	ENSODEG00000004466	CHD9	84	69.224	Octodon_degus
ENSORLG00015019126	chd9	95	86.851	ENSONIG00000002816	chd9	96	88.136	Oreochromis_niloticus
ENSORLG00015019126	chd9	81	63.329	ENSOANG00000013401	CHD9	84	71.321	Ornithorhynchus_anatinus
ENSORLG00015019126	chd9	96	69.002	ENSOCUG00000001016	CHD9	96	68.517	Oryctolagus_cuniculus
ENSORLG00015019126	chd9	100	98.580	ENSORLG00000013810	chd9	100	98.580	Oryzias_latipes
ENSORLG00015019126	chd9	99	94.556	ENSORLG00020020665	chd9	99	90.930	Oryzias_latipes_hni
ENSORLG00015019126	chd9	70	88.698	ENSOMEG00000015978	chd9	99	88.782	Oryzias_melastigma
ENSORLG00015019126	chd9	97	67.897	ENSOGAG00000002110	CHD9	79	70.042	Otolemur_garnettii
ENSORLG00015019126	chd9	95	74.777	ENSOARG00000017664	CHD9	84	70.151	Ovis_aries
ENSORLG00015019126	chd9	94	68.512	ENSPPAG00000039388	-	96	69.494	Pan_paniscus
ENSORLG00015019126	chd9	81	62.273	ENSPPRG00000004801	CHD9	92	70.732	Panthera_pardus
ENSORLG00015019126	chd9	81	61.045	ENSPTIG00000021854	CHD9	92	61.672	Panthera_tigris_altaica
ENSORLG00015019126	chd9	96	61.080	ENSPTRG00000008113	CHD9	92	70.139	Pan_troglodytes
ENSORLG00015019126	chd9	96	68.971	ENSPANG00000019307	CHD9	97	68.928	Papio_anubis
ENSORLG00015019126	chd9	96	76.367	ENSPKIG00000021876	chd9	96	77.050	Paramormyrops_kingsleyae
ENSORLG00015019126	chd9	97	70.388	ENSPKIG00000025401	-	98	62.754	Paramormyrops_kingsleyae
ENSORLG00015019126	chd9	70	62.586	ENSPSIG00000008099	CHD9	78	78.640	Pelodiscus_sinensis
ENSORLG00015019126	chd9	60	68.788	ENSPMAG00000006035	-	85	69.694	Petromyzon_marinus
ENSORLG00015019126	chd9	98	62.050	ENSPCIG00000017215	CHD9	93	78.059	Phascolarctos_cinereus
ENSORLG00015019126	chd9	97	87.510	ENSPFOG00000015839	chd9	98	82.701	Poecilia_formosa
ENSORLG00015019126	chd9	97	87.799	ENSPLAG00000011118	chd9	98	87.642	Poecilia_latipinna
ENSORLG00015019126	chd9	97	85.191	ENSPMEG00000015106	chd9	98	80.013	Poecilia_mexicana
ENSORLG00015019126	chd9	96	88.651	ENSPREG00000006473	chd9	97	88.095	Poecilia_reticulata
ENSORLG00015019126	chd9	98	67.903	ENSPPYG00000007348	CHD9	85	71.059	Pongo_abelii
ENSORLG00015019126	chd9	80	77.495	ENSPCAG00000007564	CHD9	83	79.288	Procavia_capensis
ENSORLG00015019126	chd9	81	61.091	ENSPCOG00000028433	CHD9	92	70.035	Propithecus_coquereli
ENSORLG00015019126	chd9	94	58.333	ENSPVAG00000015617	CHD9	81	74.024	Pteropus_vampyrus
ENSORLG00015019126	chd9	97	87.900	ENSPNYG00000010947	chd9	98	88.097	Pundamilia_nyererei
ENSORLG00015019126	chd9	96	77.620	ENSPNAG00000024141	chd9	97	77.345	Pygocentrus_nattereri
ENSORLG00015019126	chd9	99	60.172	ENSRNOG00000049302	Chd9	94	56.384	Rattus_norvegicus
ENSORLG00015019126	chd9	79	69.554	ENSRBIG00000035553	CHD9	95	70.364	Rhinopithecus_bieti
ENSORLG00015019126	chd9	65	76.306	ENSRROG00000033278	CHD9	96	70.514	Rhinopithecus_roxellana
ENSORLG00015019126	chd9	94	69.132	ENSSBOG00000030240	CHD9	92	70.486	Saimiri_boliviensis_boliviensis
ENSORLG00015019126	chd9	98	67.921	ENSSHAG00000002719	CHD9	79	70.263	Sarcophilus_harrisii
ENSORLG00015019126	chd9	95	77.318	ENSSFOG00015020209	chd9	97	76.809	Scleropages_formosus
ENSORLG00015019126	chd9	98	72.381	ENSSFOG00015001327	chd9	97	73.282	Scleropages_formosus
ENSORLG00015019126	chd9	96	89.158	ENSSMAG00000008953	chd9	97	88.561	Scophthalmus_maximus
ENSORLG00015019126	chd9	97	87.611	ENSSDUG00000006139	chd9	97	88.424	Seriola_dumerili
ENSORLG00015019126	chd9	97	88.300	ENSSLDG00000017818	chd9	97	89.122	Seriola_lalandi_dorsalis
ENSORLG00015019126	chd9	78	76.569	ENSSARG00000010632	CHD9	53	77.889	Sorex_araneus
ENSORLG00015019126	chd9	97	88.889	ENSSPAG00000021649	chd9	98	88.560	Stegastes_partitus
ENSORLG00015019126	chd9	99	62.584	ENSTGUG00000007476	CHD9	87	72.639	Taeniopygia_guttata
ENSORLG00015019126	chd9	99	83.033	ENSTRUG00000009125	chd9	97	76.683	Takifugu_rubripes
ENSORLG00015019126	chd9	67	84.434	ENSTNIG00000003825	chd9	84	98.817	Tetraodon_nigroviridis
ENSORLG00015019126	chd9	62	94.915	ENSTBEG00000016052	-	66	94.915	Tupaia_belangeri
ENSORLG00015019126	chd9	96	62.152	ENSTTRG00000012674	CHD9	85	69.457	Tursiops_truncatus
ENSORLG00015019126	chd9	75	85.998	ENSUMAG00000004043	CHD9	93	85.998	Ursus_maritimus
ENSORLG00015019126	chd9	94	69.473	ENSVPAG00000001374	CHD9	82	69.328	Vicugna_pacos
ENSORLG00015019126	chd9	81	62.215	ENSVVUG00000019435	CHD9	85	71.106	Vulpes_vulpes
ENSORLG00015019126	chd9	93	68.279	ENSXETG00000000349	chd9	77	75.595	Xenopus_tropicalis
ENSORLG00015019126	chd9	96	87.495	ENSXCOG00000012997	chd9	96	87.469	Xiphophorus_couchianus
ENSORLG00015019126	chd9	96	89.026	ENSXMAG00000016192	chd9	97	88.711	Xiphophorus_maculatus