EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSORLG00015019415 (Gene tree)
Gene ID
-
Gene Symbol
csde1
Alias
-
Full Name
cold shock domain containing E1%2C RNA-binding
Gene Type
protein_coding
Species
Oryzias_latipes_hsok
Status
putative
Strand
Minus strand
Length
15813 bases
Position
chr7:2013085-2028897
Accession
ZDB-GENE-030131-8623
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00015033705CSDPF00313.221.4e-8015
ENSORLP00015033705CSDPF00313.221.4e-8025
ENSORLP00015033705CSDPF00313.221.4e-8035
ENSORLP00015033705CSDPF00313.221.4e-8045
ENSORLP00015033705CSDPF00313.221.4e-8055
ENSORLP00015033750CSDPF00313.222.9e-8015
ENSORLP00015033750CSDPF00313.222.9e-8025
ENSORLP00015033750CSDPF00313.222.9e-8035
ENSORLP00015033750CSDPF00313.222.9e-8045
ENSORLP00015033750CSDPF00313.222.9e-8055
ENSORLP00015018314CSDPF00313.223.9e-8015
ENSORLP00015018314CSDPF00313.223.9e-8025
ENSORLP00015018314CSDPF00313.223.9e-8035
ENSORLP00015018314CSDPF00313.223.9e-8045
ENSORLP00015018314CSDPF00313.223.9e-8055
ENSORLP00015033770CSDPF00313.225.7e-8015
ENSORLP00015033770CSDPF00313.225.7e-8025
ENSORLP00015033770CSDPF00313.225.7e-8035
ENSORLP00015033770CSDPF00313.225.7e-8045
ENSORLP00015033770CSDPF00313.225.7e-8055
ENSORLP00015033732CSDPF00313.228.5e-8015
ENSORLP00015033732CSDPF00313.228.5e-8025
ENSORLP00015033732CSDPF00313.228.5e-8035
ENSORLP00015033732CSDPF00313.228.5e-8045
ENSORLP00015033732CSDPF00313.228.5e-8055
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00015026908-2812-ENSORLP00015033732902 (aa)--
ENSORLT00015026996-3468-ENSORLP00015018314839 (aa)--
ENSORLT00015035084-2563-ENSORLP00015033750816 (aa)--
ENSORLT00015026956-2752-ENSORLP00015033770869 (aa)--
ENSORLT00015035051-2301-ENSORLP00015033705766 (aa)--
Gene Model
Click here to download ENSORLG00015019415's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015019415's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00015019415csde110077.503ENSG00000009307CSDE110084.559Homo_sapiens
ENSORLG00015019415csde110091.299ENSAPOG00000015538csde110091.016Acanthochromis_polyacanthus
ENSORLG00015019415csde110076.723ENSAMEG00000017129CSDE19476.723Ailuropoda_melanoleuca
ENSORLG00015019415csde19091.081ENSACIG00000015175csde110091.081Amphilophus_citrinellus
ENSORLG00015019415csde110091.054ENSAOCG00000011510csde110090.755Amphiprion_ocellaris
ENSORLG00015019415csde110091.176ENSAPEG00000007194csde110091.176Amphiprion_percula
ENSORLG00015019415csde110090.507ENSATEG00000003864csde110090.507Anabas_testudineus
ENSORLG00015019415csde110079.427ENSAPLG00000008797CSDE110079.427Anas_platyrhynchos
ENSORLG00015019415csde110077.017ENSACAG00000003120CSDE110078.849Anolis_carolinensis
ENSORLG00015019415csde110077.373ENSANAG00000024665CSDE19875.000Aotus_nancymaae
ENSORLG00015019415csde19061.837ENSANAG00000028396-9362.712Aotus_nancymaae
ENSORLG00015019415csde110091.547ENSACLG00000013296csde110091.729Astatotilapia_calliptera
ENSORLG00015019415csde110083.917ENSAMXG00000007436csde110083.917Astyanax_mexicanus
ENSORLG00015019415csde110077.763ENSBTAG00000000678CSDE110077.763Bos_taurus
ENSORLG00015019415csde110077.373ENSCJAG00000012565CSDE19875.120Callithrix_jacchus
ENSORLG00015019415csde19877.955ENSCAFG00000009618CSDE19477.955Canis_familiaris
ENSORLG00015019415csde110077.763ENSCAFG00020000481CSDE110077.763Canis_lupus_dingo
ENSORLG00015019415csde110077.633ENSCHIG00000017250CSDE110077.633Capra_hircus
ENSORLG00015019415csde110077.763ENSTSYG00000003747CSDE110077.763Carlito_syrichta
ENSORLG00015019415csde19577.301ENSCAPG00000015128CSDE110077.301Cavia_aperea
ENSORLG00015019415csde110071.934ENSCPOG00000040388CSDE110073.308Cavia_porcellus
ENSORLG00015019415csde110077.373ENSCCAG00000036794CSDE110076.875Cebus_capucinus
ENSORLG00015019415csde19557.346ENSCCAG00000033677-9957.346Cebus_capucinus
ENSORLG00015019415csde19755.111ENSCCAG00000030878-9155.333Cebus_capucinus
ENSORLG00015019415csde110077.503ENSCATG00000036962CSDE19777.503Cercocebus_atys
ENSORLG00015019415csde110077.633ENSCLAG00000006618CSDE110077.633Chinchilla_lanigera
ENSORLG00015019415csde110075.214ENSCSAG00000001658CSDE19875.240Chlorocebus_sabaeus
ENSORLG00015019415csde110082.524ENSCHOG00000000918CSDE18980.122Choloepus_hoffmanni
ENSORLG00015019415csde110079.427ENSCPBG00000016547CSDE110079.427Chrysemys_picta_bellii
ENSORLG00015019415csde19843.046ENSCING00000014465-9843.160Ciona_intestinalis
ENSORLG00015019415csde19741.425ENSCSAVG00000008100-10041.596Ciona_savignyi
ENSORLG00015019415csde18879.323ENSCANG00000031069-9478.889Colobus_angolensis_palliatus
ENSORLG00015019415csde110077.503ENSCANG00000035096CSDE19777.503Colobus_angolensis_palliatus
ENSORLG00015019415csde110076.983ENSCGRG00001016833-10076.983Cricetulus_griseus_chok1gshd
ENSORLG00015019415csde110063.329ENSCGRG00001014011-10063.329Cricetulus_griseus_chok1gshd
ENSORLG00015019415csde110073.043ENSCGRG00000005831-10073.043Cricetulus_griseus_crigri
ENSORLG00015019415csde19773.556ENSCGRG00000002225-10073.778Cricetulus_griseus_crigri
ENSORLG00015019415csde110089.987ENSCSEG00000002620csde110089.987Cynoglossus_semilaevis
ENSORLG00015019415csde110090.377ENSCVAG00000001344csde110090.377Cyprinodon_variegatus
ENSORLG00015019415csde110085.330ENSDARG00000074758csde110088.129Danio_rerio
ENSORLG00015019415csde110077.922ENSDNOG00000010287-9377.922Dasypus_novemcinctus
ENSORLG00015019415csde18252.471ENSDNOG00000034464-9964.762Dasypus_novemcinctus
ENSORLG00015019415csde110074.847ENSDORG00000011609Csde110076.625Dipodomys_ordii
ENSORLG00015019415csde19947.541FBgn0263352Unr8347.904Drosophila_melanogaster
ENSORLG00015019415csde19960.495ENSETEG00000013678-9960.495Echinops_telfairi
ENSORLG00015019415csde19068.770ENSETEG00000006280-10068.770Echinops_telfairi
ENSORLG00015019415csde110081.481ENSETEG00000002491-8672.046Echinops_telfairi
ENSORLG00015019415csde17953.795ENSETEG00000007109-9953.795Echinops_telfairi
ENSORLG00015019415csde19954.152ENSEBUG00000008647csde19953.699Eptatretus_burgeri
ENSORLG00015019415csde110077.893ENSEASG00005006284CSDE110077.375Equus_asinus_asinus
ENSORLG00015019415csde110077.893ENSECAG00000020885CSDE110077.375Equus_caballus
ENSORLG00015019415csde19381.250ENSEEUG00000006286CSDE16881.250Erinaceus_europaeus
ENSORLG00015019415csde110086.320ENSELUG00000015507csde110085.252Esox_lucius
ENSORLG00015019415csde110077.763ENSFCAG00000029266CSDE110077.763Felis_catus
ENSORLG00015019415csde110076.650ENSFALG00000003407CSDE110078.473Ficedula_albicollis
ENSORLG00015019415csde19976.126ENSFDAG00000007882CSDE110076.500Fukomys_damarensis
ENSORLG00015019415csde19890.464ENSFHEG00000010799csde110090.476Fundulus_heteroclitus
ENSORLG00015019415csde19984.578ENSGMOG00000012731csde110086.591Gadus_morhua
ENSORLG00015019415csde19876.961ENSGALG00000002139CSDE19878.827Gallus_gallus
ENSORLG00015019415csde19490.534ENSGAFG00000005241csde19590.534Gambusia_affinis
ENSORLG00015019415csde19988.113ENSGACG00000004544csde110090.213Gasterosteus_aculeatus
ENSORLG00015019415csde110079.427ENSGAGG00000017685CSDE110078.849Gopherus_agassizii
ENSORLG00015019415csde110077.503ENSGGOG00000002164CSDE110077.503Gorilla_gorilla
ENSORLG00015019415csde110091.799ENSHBUG00000020315csde110091.547Haplochromis_burtoni
ENSORLG00015019415csde19766.000ENSHGLG00000010039-10066.222Heterocephalus_glaber_female
ENSORLG00015019415csde110069.051ENSHGLG00000003829-10069.051Heterocephalus_glaber_female
ENSORLG00015019415csde19767.718ENSHGLG00000008555-10067.761Heterocephalus_glaber_female
ENSORLG00015019415csde19960.391ENSHGLG00000000650-9961.827Heterocephalus_glaber_female
ENSORLG00015019415csde110070.665ENSHGLG00000009620-10070.795Heterocephalus_glaber_female
ENSORLG00015019415csde110063.224ENSHGLG00000019549-10064.536Heterocephalus_glaber_female
ENSORLG00015019415csde19966.972ENSHGLG00000007471-9866.972Heterocephalus_glaber_female
ENSORLG00015019415csde110064.759ENSHGLG00100012072-10064.759Heterocephalus_glaber_male
ENSORLG00015019415csde19965.319ENSHGLG00100007287-9865.319Heterocephalus_glaber_male
ENSORLG00015019415csde19963.659ENSHGLG00100002245-9965.169Heterocephalus_glaber_male
ENSORLG00015019415csde19765.778ENSHGLG00100006910-10066.000Heterocephalus_glaber_male
ENSORLG00015019415csde110063.377ENSHGLG00100001846-10063.377Heterocephalus_glaber_male
ENSORLG00015019415csde19365.460ENSHGLG00100004195-10065.460Heterocephalus_glaber_male
ENSORLG00015019415csde110077.243ENSHGLG00100019438-10077.243Heterocephalus_glaber_male
ENSORLG00015019415csde19760.938ENSHGLG00100004833-10060.938Heterocephalus_glaber_male
ENSORLG00015019415csde110088.817ENSHCOG00000004158csde110088.817Hippocampus_comes
ENSORLG00015019415csde110084.047ENSIPUG00000000355csde110084.047Ictalurus_punctatus
ENSORLG00015019415csde110063.857ENSSTOG00000030994-10063.857Ictidomys_tridecemlineatus
ENSORLG00015019415csde19356.492ENSSTOG00000032722-9957.051Ictidomys_tridecemlineatus
ENSORLG00015019415csde110074.969ENSJJAG00000019571Csde110076.750Jaculus_jaculus
ENSORLG00015019415csde110088.672ENSKMAG00000005685csde110090.323Kryptolebias_marmoratus
ENSORLG00015019415csde110091.065ENSLBEG00000014770csde110090.897Labrus_bergylta
ENSORLG00015019415csde110073.583ENSLACG00000018452CSDE110071.804Latimeria_chalumnae
ENSORLG00015019415csde110082.230ENSLOCG00000010413csde19883.454Lepisosteus_oculatus
ENSORLG00015019415csde110077.373ENSLAFG00000007150CSDE19677.373Loxodonta_africana
ENSORLG00015019415csde110077.503ENSMFAG00000003674CSDE110077.503Macaca_fascicularis
ENSORLG00015019415csde110077.503ENSMMUG00000001974CSDE110077.503Macaca_mulatta
ENSORLG00015019415csde110077.503ENSMNEG00000045247CSDE19777.503Macaca_nemestrina
ENSORLG00015019415csde110077.243ENSMLEG00000038673CSDE19875.000Mandrillus_leucophaeus
ENSORLG00015019415csde110091.422ENSMAMG00000008821csde110091.406Mastacembelus_armatus
ENSORLG00015019415csde110091.547ENSMZEG00005021675csde110091.547Maylandia_zebra
ENSORLG00015019415csde110079.194ENSMGAG00000016381CSDE110079.194Meleagris_gallopavo
ENSORLG00015019415csde110074.725ENSMAUG00000014031Csde110076.500Mesocricetus_auratus
ENSORLG00015019415csde110077.633ENSMICG00000002050CSDE19677.575Microcebus_murinus
ENSORLG00015019415csde110076.983ENSMOCG00000018960Csde110076.983Microtus_ochrogaster
ENSORLG00015019415csde110091.547ENSMMOG00000015075csde110091.547Mola_mola
ENSORLG00015019415csde110077.951ENSMODG00000004685CSDE110078.125Monodelphis_domestica
ENSORLG00015019415csde110091.417ENSMALG00000007132csde110091.417Monopterus_albus
ENSORLG00015019415csde110076.853MGP_CAROLIEiJ_G0025444Csde110089.216Mus_caroli
ENSORLG00015019415csde110077.113ENSMUSG00000068823Csde19989.216Mus_musculus
ENSORLG00015019415csde110077.113MGP_PahariEiJ_G0026888Csde110089.216Mus_pahari
ENSORLG00015019415csde110077.113MGP_SPRETEiJ_G0026394Csde110089.216Mus_spretus
ENSORLG00015019415csde19875.592ENSMPUG00000005753CSDE19977.423Mustela_putorius_furo
ENSORLG00015019415csde110077.243ENSMLUG00000005681CSDE19477.243Myotis_lucifugus
ENSORLG00015019415csde19975.976ENSNGAG00000021929Csde110076.375Nannospalax_galili
ENSORLG00015019415csde19652.667ENSNGAG00000012599-10052.667Nannospalax_galili
ENSORLG00015019415csde110091.547ENSNBRG00000020808csde110091.547Neolamprologus_brichardi
ENSORLG00015019415csde110077.503ENSNLEG00000004842CSDE19777.503Nomascus_leucogenys
ENSORLG00015019415csde19882.524ENSMEUG00000002677CSDE19582.524Notamacropus_eugenii
ENSORLG00015019415csde19882.524ENSOPRG00000005002CSDE17682.524Ochotona_princeps
ENSORLG00015019415csde19976.126ENSODEG00000007383-10076.375Octodon_degus
ENSORLG00015019415csde19752.759ENSODEG00000005979-9852.993Octodon_degus
ENSORLG00015019415csde110091.677ENSONIG00000009309csde110091.677Oreochromis_niloticus
ENSORLG00015019415csde110079.661ENSOANG00000003346-8379.661Ornithorhynchus_anatinus
ENSORLG00015019415csde110077.243ENSOCUG00000016438CSDE19975.268Oryctolagus_cuniculus
ENSORLG00015019415csde110099.632ENSORLG00000000707csde110099.632Oryzias_latipes
ENSORLG00015019415csde110099.557ENSORLG00020005148csde110099.557Oryzias_latipes_hni
ENSORLG00015019415csde110096.782ENSOMEG00000015656csde110096.782Oryzias_melastigma
ENSORLG00015019415csde110077.633ENSOGAG00000012127CSDE19477.633Otolemur_garnettii
ENSORLG00015019415csde110077.633ENSOARG00000020034CSDE19477.633Ovis_aries
ENSORLG00015019415csde110077.503ENSPPAG00000025861CSDE110077.503Pan_paniscus
ENSORLG00015019415csde110077.763ENSPPRG00000006747CSDE19875.481Panthera_pardus
ENSORLG00015019415csde110077.763ENSPTIG00000015468CSDE110077.250Panthera_tigris_altaica
ENSORLG00015019415csde110077.503ENSPTRG00000033721CSDE110077.000Pan_troglodytes
ENSORLG00015019415csde110077.503ENSPANG00000018873CSDE110077.503Papio_anubis
ENSORLG00015019415csde110084.115ENSPKIG00000009459csde110084.115Paramormyrops_kingsleyae
ENSORLG00015019415csde19677.707ENSPSIG00000003823CSDE19680.973Pelodiscus_sinensis
ENSORLG00015019415csde110088.427ENSPMGG00000000772csde110088.427Periophthalmus_magnuspinnatus
ENSORLG00015019415csde110074.969ENSPEMG00000020357-10076.750Peromyscus_maniculatus_bairdii
ENSORLG00015019415csde110076.435ENSPCIG00000022587CSDE110078.250Phascolarctos_cinereus
ENSORLG00015019415csde19788.491ENSPFOG00000012664csde110088.802Poecilia_formosa
ENSORLG00015019415csde19583.717ENSPLAG00000017680csde19383.717Poecilia_latipinna
ENSORLG00015019415csde19584.178ENSPMEG00000005094csde19584.178Poecilia_mexicana
ENSORLG00015019415csde110089.573ENSPREG00000011631csde110089.810Poecilia_reticulata
ENSORLG00015019415csde110075.092ENSPPYG00000000996CSDE110076.875Pongo_abelii
ENSORLG00015019415csde110083.495ENSPCAG00000014368CSDE19083.495Procavia_capensis
ENSORLG00015019415csde110077.763ENSPCOG00000017893CSDE110077.763Propithecus_coquereli
ENSORLG00015019415csde18869.888ENSPCOG00000008223-9269.888Propithecus_coquereli
ENSORLG00015019415csde110072.432ENSPVAG00000008225CSDE19968.503Pteropus_vampyrus
ENSORLG00015019415csde110091.547ENSPNYG00000013745csde110091.547Pundamilia_nyererei
ENSORLG00015019415csde110084.935ENSPNAG00000001958csde110084.935Pygocentrus_nattereri
ENSORLG00015019415csde110074.725ENSRNOG00000061058Csde110076.500Rattus_norvegicus
ENSORLG00015019415csde110073.022ENSRBIG00000038966-9870.708Rhinopithecus_bieti
ENSORLG00015019415csde110074.545ENSRBIG00000038088-10074.545Rhinopithecus_bieti
ENSORLG00015019415csde110077.503ENSRROG00000043101CSDE19777.503Rhinopithecus_roxellana
ENSORLG00015019415csde110077.373ENSSBOG00000035592CSDE19875.120Saimiri_boliviensis_boliviensis
ENSORLG00015019415csde110078.804ENSSHAG00000009831CSDE110078.804Sarcophilus_harrisii
ENSORLG00015019415csde110090.476ENSSFOG00015007498csde110083.636Scleropages_formosus
ENSORLG00015019415csde110092.057ENSSMAG00000007203csde110092.057Scophthalmus_maximus
ENSORLG00015019415csde110091.536ENSSDUG00000015380csde110091.536Seriola_dumerili
ENSORLG00015019415csde110091.536ENSSLDG00000008819csde110091.536Seriola_lalandi_dorsalis
ENSORLG00015019415csde110077.373ENSSARG00000000738CSDE110071.795Sorex_araneus
ENSORLG00015019415csde110079.557ENSSPUG00000008714CSDE110079.557Sphenodon_punctatus
ENSORLG00015019415csde110091.406ENSSPAG00000000716csde110091.406Stegastes_partitus
ENSORLG00015019415csde110077.893ENSSSCG00000006752CSDE110077.893Sus_scrofa
ENSORLG00015019415csde110075.732ENSTGUG00000000972CSDE110077.528Taeniopygia_guttata
ENSORLG00015019415csde110085.286ENSTRUG00000007996csde110085.286Takifugu_rubripes
ENSORLG00015019415csde19380.843ENSTNIG00000010878csde110090.421Tetraodon_nigroviridis
ENSORLG00015019415csde19281.595ENSTBEG00000011880-6081.595Tupaia_belangeri
ENSORLG00015019415csde110077.243ENSTTRG00000015583CSDE19477.243Tursiops_truncatus
ENSORLG00015019415csde18773.515ENSUAMG00000024289-9973.515Ursus_americanus
ENSORLG00015019415csde19281.433ENSUAMG00000021779-9981.029Ursus_americanus
ENSORLG00015019415csde19772.986ENSUMAG00000011714-9973.223Ursus_maritimus
ENSORLG00015019415csde110071.261ENSUMAG00000009720-9771.261Ursus_maritimus
ENSORLG00015019415csde110080.420ENSVPAG00000000749CSDE17980.420Vicugna_pacos
ENSORLG00015019415csde19374.184ENSVVUG00000009890CSDE19476.239Vulpes_vulpes
ENSORLG00015019415csde110075.912ENSXETG00000021448csde110077.709Xenopus_tropicalis
ENSORLG00015019415csde19492.593ENSXCOG00000000035csde19983.826Xiphophorus_couchianus
ENSORLG00015019415csde110089.769ENSXMAG00000009080csde110090.012Xiphophorus_maculatus

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