EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015019484 (Gene tree)
Gene ID: -
Gene Symbol: clp1
Alias: -
Full Name: cleavage and polyadenylation factor I subunit 1
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 2933 bases
Position: chr10:23111199-23114131
Accession: 101158455
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015018429	Clp1	PF06807.14	6.7e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015027128	-	1990	-	ENSORLP00015018429	441 (aa)	XP_004073288	H2LF13

Gene Model

Click here to download ENSORLG00015019484's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015019484's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015019484	clp1	99	74.253	ENSG00000172409	CLP1	99	74.710	Homo_sapiens
ENSORLG00015019484	clp1	100	93.424	ENSAPOG00000008242	clp1	100	93.424	Acanthochromis_polyacanthus
ENSORLG00015019484	clp1	99	74.253	ENSAMEG00000014551	CLP1	99	74.253	Ailuropoda_melanoleuca
ENSORLG00015019484	clp1	100	93.878	ENSACIG00000006310	clp1	99	93.878	Amphilophus_citrinellus
ENSORLG00015019484	clp1	100	93.878	ENSAOCG00000010681	clp1	100	93.878	Amphiprion_ocellaris
ENSORLG00015019484	clp1	100	93.878	ENSAPEG00000012165	clp1	100	93.878	Amphiprion_percula
ENSORLG00015019484	clp1	100	93.878	ENSATEG00000012374	clp1	100	93.878	Anabas_testudineus
ENSORLG00015019484	clp1	99	74.483	ENSACAG00000007139	CLP1	99	74.483	Anolis_carolinensis
ENSORLG00015019484	clp1	100	73.243	ENSANAG00000034935	CLP1	99	74.710	Aotus_nancymaae
ENSORLG00015019484	clp1	100	94.558	ENSACLG00000013573	clp1	100	94.558	Astatotilapia_calliptera
ENSORLG00015019484	clp1	95	86.557	ENSAMXG00000014194	clp1	98	86.557	Astyanax_mexicanus
ENSORLG00015019484	clp1	98	74.478	ENSBTAG00000006493	CLP1	99	74.478	Bos_taurus
ENSORLG00015019484	clp1	96	46.963	WBGene00010304	clpf-1	98	46.963	Caenorhabditis_elegans
ENSORLG00015019484	clp1	100	73.243	ENSCJAG00000008748	CLP1	99	74.710	Callithrix_jacchus
ENSORLG00015019484	clp1	98	74.478	ENSCAFG00000007815	CLP1	99	74.478	Canis_familiaris
ENSORLG00015019484	clp1	98	74.478	ENSCAFG00020000903	CLP1	99	74.478	Canis_lupus_dingo
ENSORLG00015019484	clp1	99	74.943	ENSCHIG00000023497	CLP1	99	74.943	Capra_hircus
ENSORLG00015019484	clp1	99	74.483	ENSTSYG00000006824	CLP1	99	74.483	Carlito_syrichta
ENSORLG00015019484	clp1	99	74.483	ENSCAPG00000009703	CLP1	99	74.483	Cavia_aperea
ENSORLG00015019484	clp1	96	75.708	ENSCPOG00000012554	CLP1	99	75.708	Cavia_porcellus
ENSORLG00015019484	clp1	99	74.483	ENSCCAG00000031957	CLP1	99	74.483	Cebus_capucinus
ENSORLG00015019484	clp1	100	73.243	ENSCATG00000044628	CLP1	99	74.710	Cercocebus_atys
ENSORLG00015019484	clp1	98	74.710	ENSCLAG00000004094	CLP1	99	74.710	Chinchilla_lanigera
ENSORLG00015019484	clp1	98	74.710	ENSCSAG00000005994	CLP1	99	74.710	Chlorocebus_sabaeus
ENSORLG00015019484	clp1	98	74.074	ENSCPBG00000016843	CLP1	99	74.074	Chrysemys_picta_bellii
ENSORLG00015019484	clp1	95	61.814	ENSCING00000003779	-	96	61.814	Ciona_intestinalis
ENSORLG00015019484	clp1	95	62.201	ENSCSAVG00000003437	-	96	62.201	Ciona_savignyi
ENSORLG00015019484	clp1	99	74.253	ENSCANG00000034335	CLP1	99	74.710	Colobus_angolensis_palliatus
ENSORLG00015019484	clp1	98	74.074	ENSCGRG00001002227	CLP1	99	74.074	Cricetulus_griseus_chok1gshd
ENSORLG00015019484	clp1	98	74.074	ENSCGRG00000004328	CLP1	99	74.074	Cricetulus_griseus_crigri
ENSORLG00015019484	clp1	100	92.517	ENSCSEG00000008614	clp1	100	92.517	Cynoglossus_semilaevis
ENSORLG00015019484	clp1	100	93.878	ENSCVAG00000020101	clp1	100	93.878	Cyprinodon_variegatus
ENSORLG00015019484	clp1	99	85.488	ENSDARG00000063663	clp1	99	85.488	Danio_rerio
ENSORLG00015019484	clp1	98	73.903	ENSDNOG00000042415	CLP1	90	73.903	Dasypus_novemcinctus
ENSORLG00015019484	clp1	99	74.253	ENSDORG00000014685	Clp1	99	74.253	Dipodomys_ordii
ENSORLG00015019484	clp1	96	53.647	FBgn0033842	cbc	98	53.647	Drosophila_melanogaster
ENSORLG00015019484	clp1	98	74.710	ENSETEG00000003009	CLP1	99	74.710	Echinops_telfairi
ENSORLG00015019484	clp1	98	63.573	ENSEBUG00000011648	clp1	99	63.573	Eptatretus_burgeri
ENSORLG00015019484	clp1	99	74.713	ENSEASG00005002093	CLP1	99	74.713	Equus_asinus_asinus
ENSORLG00015019484	clp1	99	74.713	ENSECAG00000011597	CLP1	99	74.713	Equus_caballus
ENSORLG00015019484	clp1	99	74.023	ENSEEUG00000012771	CLP1	99	74.023	Erinaceus_europaeus
ENSORLG00015019484	clp1	100	83.857	ENSELUG00000024048	clp1	100	83.857	Esox_lucius
ENSORLG00015019484	clp1	99	74.483	ENSFCAG00000006633	CLP1	99	74.483	Felis_catus
ENSORLG00015019484	clp1	98	74.769	ENSFALG00000011145	CLP1	99	74.769	Ficedula_albicollis
ENSORLG00015019484	clp1	98	74.710	ENSFDAG00000000234	CLP1	99	74.710	Fukomys_damarensis
ENSORLG00015019484	clp1	100	94.785	ENSFHEG00000014760	CLP1	100	94.785	Fundulus_heteroclitus
ENSORLG00015019484	clp1	100	87.302	ENSGMOG00000019340	clp1	100	87.302	Gadus_morhua
ENSORLG00015019484	clp1	98	74.537	ENSGALG00000007370	CLP1	99	74.537	Gallus_gallus
ENSORLG00015019484	clp1	100	94.104	ENSGAFG00000003020	clp1	100	94.104	Gambusia_affinis
ENSORLG00015019484	clp1	100	93.197	ENSGACG00000017832	clp1	100	93.197	Gasterosteus_aculeatus
ENSORLG00015019484	clp1	98	74.306	ENSGAGG00000013279	CLP1	99	74.306	Gopherus_agassizii
ENSORLG00015019484	clp1	99	74.253	ENSGGOG00000023006	CLP1	99	74.710	Gorilla_gorilla
ENSORLG00015019484	clp1	100	94.785	ENSHBUG00000010436	clp1	100	94.785	Haplochromis_burtoni
ENSORLG00015019484	clp1	98	74.710	ENSHGLG00000009914	CLP1	99	74.710	Heterocephalus_glaber_female
ENSORLG00015019484	clp1	98	74.710	ENSHGLG00100006105	CLP1	99	74.710	Heterocephalus_glaber_male
ENSORLG00015019484	clp1	100	92.290	ENSHCOG00000010072	clp1	100	92.290	Hippocampus_comes
ENSORLG00015019484	clp1	100	84.633	ENSIPUG00000016238	clp1	99	84.633	Ictalurus_punctatus
ENSORLG00015019484	clp1	98	74.478	ENSSTOG00000029257	CLP1	99	74.478	Ictidomys_tridecemlineatus
ENSORLG00015019484	clp1	98	74.478	ENSJJAG00000023691	Clp1	99	74.478	Jaculus_jaculus
ENSORLG00015019484	clp1	100	94.104	ENSKMAG00000011990	clp1	100	94.104	Kryptolebias_marmoratus
ENSORLG00015019484	clp1	100	93.651	ENSLBEG00000010201	clp1	100	93.651	Labrus_bergylta
ENSORLG00015019484	clp1	96	75.236	ENSLACG00000003160	CLP1	98	75.236	Latimeria_chalumnae
ENSORLG00015019484	clp1	71	84.472	ENSLOCG00000008074	clp1	100	84.472	Lepisosteus_oculatus
ENSORLG00015019484	clp1	98	74.478	ENSLAFG00000014907	CLP1	99	74.478	Loxodonta_africana
ENSORLG00015019484	clp1	99	74.253	ENSMFAG00000046074	CLP1	99	74.710	Macaca_fascicularis
ENSORLG00015019484	clp1	99	74.253	ENSMMUG00000038007	CLP1	99	74.253	Macaca_mulatta
ENSORLG00015019484	clp1	98	74.710	ENSMNEG00000000259	CLP1	99	74.710	Macaca_nemestrina
ENSORLG00015019484	clp1	99	74.253	ENSMLEG00000043556	CLP1	99	74.710	Mandrillus_leucophaeus
ENSORLG00015019484	clp1	100	93.878	ENSMAMG00000002149	clp1	100	93.878	Mastacembelus_armatus
ENSORLG00015019484	clp1	100	94.558	ENSMZEG00005002850	clp1	100	94.558	Maylandia_zebra
ENSORLG00015019484	clp1	98	74.537	ENSMGAG00000009643	CLP1	99	74.537	Meleagris_gallopavo
ENSORLG00015019484	clp1	98	73.611	ENSMAUG00000016261	Clp1	99	73.611	Mesocricetus_auratus
ENSORLG00015019484	clp1	99	73.804	ENSMICG00000004895	CLP1	99	74.478	Microcebus_murinus
ENSORLG00015019484	clp1	98	74.306	ENSMOCG00000005498	Clp1	99	74.306	Microtus_ochrogaster
ENSORLG00015019484	clp1	100	91.383	ENSMMOG00000003229	clp1	100	91.383	Mola_mola
ENSORLG00015019484	clp1	96	75.708	ENSMODG00000024148	-	99	74.306	Monodelphis_domestica
ENSORLG00015019484	clp1	96	75.708	ENSMODG00000020107	-	99	74.306	Monodelphis_domestica
ENSORLG00015019484	clp1	100	94.331	ENSMALG00000014239	clp1	100	94.331	Monopterus_albus
ENSORLG00015019484	clp1	98	74.074	MGP_CAROLIEiJ_G0023726	Clp1	99	74.074	Mus_caroli
ENSORLG00015019484	clp1	98	74.074	ENSMUSG00000027079	Clp1	99	74.074	Mus_musculus
ENSORLG00015019484	clp1	98	73.843	MGP_PahariEiJ_G0025177	Clp1	99	73.843	Mus_pahari
ENSORLG00015019484	clp1	98	74.074	MGP_SPRETEiJ_G0024646	Clp1	99	74.074	Mus_spretus
ENSORLG00015019484	clp1	98	74.478	ENSMPUG00000000268	CLP1	99	74.478	Mustela_putorius_furo
ENSORLG00015019484	clp1	99	74.943	ENSMLUG00000007904	CLP1	99	74.943	Myotis_lucifugus
ENSORLG00015019484	clp1	98	74.246	ENSNGAG00000006165	Clp1	99	74.246	Nannospalax_galili
ENSORLG00015019484	clp1	100	94.104	ENSNBRG00000005225	clp1	100	94.104	Neolamprologus_brichardi
ENSORLG00015019484	clp1	80	68.627	ENSNLEG00000012809	-	99	68.627	Nomascus_leucogenys
ENSORLG00015019484	clp1	98	74.194	ENSMEUG00000010949	CLP1	100	74.194	Notamacropus_eugenii
ENSORLG00015019484	clp1	69	76.568	ENSOPRG00000007329	CLP1	100	76.568	Ochotona_princeps
ENSORLG00015019484	clp1	98	74.710	ENSODEG00000011410	CLP1	99	74.710	Octodon_degus
ENSORLG00015019484	clp1	100	94.558	ENSONIG00000005089	clp1	100	94.558	Oreochromis_niloticus
ENSORLG00015019484	clp1	99	74.483	ENSOCUG00000007045	CLP1	99	74.483	Oryctolagus_cuniculus
ENSORLG00015019484	clp1	100	100.000	ENSORLG00000003647	clp1	100	100.000	Oryzias_latipes
ENSORLG00015019484	clp1	100	99.773	ENSORLG00020016676	clp1	100	99.773	Oryzias_latipes_hni
ENSORLG00015019484	clp1	100	98.186	ENSOMEG00000021303	clp1	100	98.186	Oryzias_melastigma
ENSORLG00015019484	clp1	99	74.483	ENSOGAG00000004508	CLP1	99	74.483	Otolemur_garnettii
ENSORLG00015019484	clp1	98	73.502	ENSOARG00000010145	CLP1	99	73.502	Ovis_aries
ENSORLG00015019484	clp1	99	74.253	ENSPPAG00000041519	CLP1	99	74.710	Pan_paniscus
ENSORLG00015019484	clp1	99	74.483	ENSPPRG00000006135	CLP1	99	74.483	Panthera_pardus
ENSORLG00015019484	clp1	99	74.483	ENSPTIG00000015866	CLP1	99	74.483	Panthera_tigris_altaica
ENSORLG00015019484	clp1	98	74.710	ENSPTRG00000047318	CLP1	99	74.710	Pan_troglodytes
ENSORLG00015019484	clp1	99	74.253	ENSPANG00000017078	CLP1	98	74.253	Papio_anubis
ENSORLG00015019484	clp1	100	84.045	ENSPKIG00000007697	clp1	100	84.270	Paramormyrops_kingsleyae
ENSORLG00015019484	clp1	93	71.149	ENSPSIG00000005468	CLP1	99	71.149	Pelodiscus_sinensis
ENSORLG00015019484	clp1	100	91.610	ENSPMGG00000012171	clp1	100	91.610	Periophthalmus_magnuspinnatus
ENSORLG00015019484	clp1	98	74.306	ENSPEMG00000011213	-	99	74.306	Peromyscus_maniculatus_bairdii
ENSORLG00015019484	clp1	98	66.435	ENSPMAG00000006707	clp1	99	66.435	Petromyzon_marinus
ENSORLG00015019484	clp1	99	74.713	ENSPCIG00000011899	CLP1	99	74.713	Phascolarctos_cinereus
ENSORLG00015019484	clp1	100	94.104	ENSPFOG00000008169	clp1	100	94.104	Poecilia_formosa
ENSORLG00015019484	clp1	100	94.104	ENSPLAG00000022388	clp1	100	94.104	Poecilia_latipinna
ENSORLG00015019484	clp1	100	94.104	ENSPMEG00000021088	clp1	100	94.104	Poecilia_mexicana
ENSORLG00015019484	clp1	100	94.104	ENSPREG00000017802	clp1	100	94.104	Poecilia_reticulata
ENSORLG00015019484	clp1	52	72.926	ENSPPYG00000003266	-	100	72.926	Pongo_abelii
ENSORLG00015019484	clp1	99	74.253	ENSPCOG00000000360	CLP1	99	74.253	Propithecus_coquereli
ENSORLG00015019484	clp1	98	74.478	ENSPVAG00000016270	CLP1	99	74.478	Pteropus_vampyrus
ENSORLG00015019484	clp1	100	94.785	ENSPNYG00000017274	clp1	99	94.785	Pundamilia_nyererei
ENSORLG00015019484	clp1	100	84.152	ENSPNAG00000026460	clp1	100	84.598	Pygocentrus_nattereri
ENSORLG00015019484	clp1	98	74.074	ENSRNOG00000007416	Clp1	99	74.074	Rattus_norvegicus
ENSORLG00015019484	clp1	98	74.710	ENSRBIG00000018191	CLP1	99	74.710	Rhinopithecus_bieti
ENSORLG00015019484	clp1	99	74.253	ENSRROG00000039265	CLP1	99	74.710	Rhinopithecus_roxellana
ENSORLG00015019484	clp1	98	74.710	ENSSBOG00000032517	-	99	74.710	Saimiri_boliviensis_boliviensis
ENSORLG00015019484	clp1	94	61.836	ENSSBOG00000010558	-	93	61.836	Saimiri_boliviensis_boliviensis
ENSORLG00015019484	clp1	98	74.537	ENSSHAG00000015695	CLP1	99	74.537	Sarcophilus_harrisii
ENSORLG00015019484	clp1	100	82.781	ENSSFOG00015000628	clp1	99	83.973	Scleropages_formosus
ENSORLG00015019484	clp1	100	94.785	ENSSMAG00000019423	clp1	99	94.785	Scophthalmus_maximus
ENSORLG00015019484	clp1	100	94.331	ENSSDUG00000014495	clp1	100	94.331	Seriola_dumerili
ENSORLG00015019484	clp1	100	94.104	ENSSLDG00000000937	clp1	100	94.104	Seriola_lalandi_dorsalis
ENSORLG00015019484	clp1	52	72.807	ENSSARG00000002459	CLP1	100	72.807	Sorex_araneus
ENSORLG00015019484	clp1	98	73.843	ENSSPUG00000016811	CLP1	99	73.843	Sphenodon_punctatus
ENSORLG00015019484	clp1	100	93.878	ENSSPAG00000016052	clp1	100	93.878	Stegastes_partitus
ENSORLG00015019484	clp1	98	74.478	ENSSSCG00000031442	CLP1	99	74.478	Sus_scrofa
ENSORLG00015019484	clp1	98	74.537	ENSTGUG00000007002	CLP1	99	74.537	Taeniopygia_guttata
ENSORLG00015019484	clp1	100	89.116	ENSTRUG00000012602	clp1	100	89.116	Takifugu_rubripes
ENSORLG00015019484	clp1	100	88.209	ENSTNIG00000013125	clp1	100	88.209	Tetraodon_nigroviridis
ENSORLG00015019484	clp1	98	74.014	ENSTBEG00000009975	CLP1	99	74.014	Tupaia_belangeri
ENSORLG00015019484	clp1	98	74.478	ENSTTRG00000002096	CLP1	99	74.478	Tursiops_truncatus
ENSORLG00015019484	clp1	98	74.478	ENSUAMG00000011388	CLP1	99	74.478	Ursus_americanus
ENSORLG00015019484	clp1	98	74.478	ENSUMAG00000018317	CLP1	99	74.478	Ursus_maritimus
ENSORLG00015019484	clp1	100	73.469	ENSVVUG00000017138	CLP1	99	73.469	Vulpes_vulpes
ENSORLG00015019484	clp1	100	69.977	ENSXETG00000007088	clp1	100	70.880	Xenopus_tropicalis
ENSORLG00015019484	clp1	100	94.331	ENSXCOG00000002287	clp1	100	94.331	Xiphophorus_couchianus
ENSORLG00015019484	clp1	100	94.331	ENSXMAG00000009783	clp1	100	94.331	Xiphophorus_maculatus