EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015019747 (Gene tree)
Gene ID: -
Gene Symbol: xrn2
Alias: -
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 30268 bases
Position: chr24:16064489-16094756
Accession: ZDB-GENE-040426-2874
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015034023	XRN_N	PF03159.18	2.9e-101	1	1
ENSORLP00015018642	XRN_N	PF03159.18	3e-101	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015027450	-	5816	-	ENSORLP00015034023	961 (aa)	-	-
ENSORLT00015027390	-	5789	-	ENSORLP00015018642	972 (aa)	-	-

Gene Model

Click here to download ENSORLG00015019747's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015019747's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015019747	xrn2	100	69.796	ENSG00000088930	XRN2	98	70.093	Homo_sapiens
ENSORLG00015019747	xrn2	97	85.102	ENSAPOG00000009818	xrn2	98	84.479	Acanthochromis_polyacanthus
ENSORLG00015019747	xrn2	100	69.857	ENSAMEG00000012581	XRN2	98	70.197	Ailuropoda_melanoleuca
ENSORLG00015019747	xrn2	91	81.736	ENSACIG00000015047	xrn2	95	86.502	Amphilophus_citrinellus
ENSORLG00015019747	xrn2	97	86.602	ENSAOCG00000023632	xrn2	98	85.729	Amphiprion_ocellaris
ENSORLG00015019747	xrn2	97	86.174	ENSAPEG00000014871	xrn2	98	85.625	Amphiprion_percula
ENSORLG00015019747	xrn2	97	85.638	ENSATEG00000001273	xrn2	99	84.656	Anabas_testudineus
ENSORLG00015019747	xrn2	94	70.737	ENSAPLG00000013869	XRN2	96	69.967	Anas_platyrhynchos
ENSORLG00015019747	xrn2	100	70.314	ENSACAG00000005565	XRN2	100	70.010	Anolis_carolinensis
ENSORLG00015019747	xrn2	100	69.898	ENSANAG00000020126	XRN2	98	70.197	Aotus_nancymaae
ENSORLG00015019747	xrn2	90	85.829	ENSACLG00000010522	xrn2	98	85.829	Astatotilapia_calliptera
ENSORLG00015019747	xrn2	100	79.044	ENSAMXG00000018301	xrn2	98	79.709	Astyanax_mexicanus
ENSORLG00015019747	xrn2	100	69.348	ENSBTAG00000011304	XRN2	98	69.678	Bos_taurus
ENSORLG00015019747	xrn2	87	54.577	WBGene00006964	xrn-2	97	51.227	Caenorhabditis_elegans
ENSORLG00015019747	xrn2	100	70.000	ENSCJAG00000005611	XRN2	98	70.301	Callithrix_jacchus
ENSORLG00015019747	xrn2	100	69.857	ENSCAFG00000005185	XRN2	98	70.197	Canis_familiaris
ENSORLG00015019747	xrn2	100	69.857	ENSCAFG00020027479	XRN2	98	70.197	Canis_lupus_dingo
ENSORLG00015019747	xrn2	100	69.348	ENSCHIG00000006921	XRN2	98	69.678	Capra_hircus
ENSORLG00015019747	xrn2	100	69.756	ENSTSYG00000008315	XRN2	98	70.093	Carlito_syrichta
ENSORLG00015019747	xrn2	97	60.149	ENSCAPG00000010773	XRN2	98	59.342	Cavia_aperea
ENSORLG00015019747	xrn2	100	70.265	ENSCPOG00000009407	XRN2	98	70.613	Cavia_porcellus
ENSORLG00015019747	xrn2	100	69.796	ENSCATG00000040350	XRN2	98	70.366	Cercocebus_atys
ENSORLG00015019747	xrn2	100	70.163	ENSCLAG00000013419	XRN2	98	70.509	Chinchilla_lanigera
ENSORLG00015019747	xrn2	100	69.796	ENSCSAG00000011094	XRN2	98	70.093	Chlorocebus_sabaeus
ENSORLG00015019747	xrn2	61	88.172	ENSCHOG00000013404	XRN2	63	88.172	Choloepus_hoffmanni
ENSORLG00015019747	xrn2	100	70.438	ENSCPBG00000023533	XRN2	98	70.656	Chrysemys_picta_bellii
ENSORLG00015019747	xrn2	86	59.434	ENSCING00000022336	-	100	60.495	Ciona_intestinalis
ENSORLG00015019747	xrn2	84	69.535	ENSCSAVG00000011217	-	96	70.361	Ciona_savignyi
ENSORLG00015019747	xrn2	100	69.796	ENSCANG00000040240	XRN2	98	70.093	Colobus_angolensis_palliatus
ENSORLG00015019747	xrn2	99	70.995	ENSCGRG00001010676	Xrn2	99	71.099	Cricetulus_griseus_chok1gshd
ENSORLG00015019747	xrn2	97	69.616	ENSCGRG00000006378	Xrn2	98	69.755	Cricetulus_griseus_crigri
ENSORLG00015019747	xrn2	54	79.271	ENSCSEG00000005628	xrn2	100	79.271	Cynoglossus_semilaevis
ENSORLG00015019747	xrn2	91	84.032	ENSCVAG00000018999	xrn2	98	91.396	Cyprinodon_variegatus
ENSORLG00015019747	xrn2	100	75.583	ENSDARG00000101900	xrn2	96	84.924	Danio_rerio
ENSORLG00015019747	xrn2	100	69.694	ENSDNOG00000001895	XRN2	98	70.031	Dasypus_novemcinctus
ENSORLG00015019747	xrn2	100	69.286	ENSDORG00000005434	Xrn2	98	69.678	Dipodomys_ordii
ENSORLG00015019747	xrn2	87	55.036	FBgn0031868	Rat1	99	52.526	Drosophila_melanogaster
ENSORLG00015019747	xrn2	91	81.265	ENSETEG00000001740	XRN2	90	81.265	Echinops_telfairi
ENSORLG00015019747	xrn2	84	69.296	ENSEBUG00000016136	xrn2	100	69.296	Eptatretus_burgeri
ENSORLG00015019747	xrn2	100	69.827	ENSEASG00005002484	XRN2	98	70.166	Equus_asinus_asinus
ENSORLG00015019747	xrn2	94	92.308	ENSECAG00000018988	XRN2	95	92.308	Equus_caballus
ENSORLG00015019747	xrn2	67	96.000	ENSEEUG00000009265	XRN2	67	96.000	Erinaceus_europaeus
ENSORLG00015019747	xrn2	100	79.370	ENSELUG00000000552	xrn2	98	79.814	Esox_lucius
ENSORLG00015019747	xrn2	100	69.654	ENSFCAG00000007970	XRN2	98	69.990	Felis_catus
ENSORLG00015019747	xrn2	95	72.462	ENSFALG00000004508	XRN2	96	72.462	Ficedula_albicollis
ENSORLG00015019747	xrn2	100	69.959	ENSFDAG00000016311	XRN2	98	70.301	Fukomys_damarensis
ENSORLG00015019747	xrn2	54	82.375	ENSFHEG00000013039	xrn2	98	82.375	Fundulus_heteroclitus
ENSORLG00015019747	xrn2	86	79.232	ENSGMOG00000013436	xrn2	100	79.232	Gadus_morhua
ENSORLG00015019747	xrn2	100	69.215	ENSGALG00000008372	XRN2	98	68.776	Gallus_gallus
ENSORLG00015019747	xrn2	90	86.191	ENSGAFG00000014284	xrn2	99	86.191	Gambusia_affinis
ENSORLG00015019747	xrn2	87	83.353	ENSGACG00000011870	xrn2	96	88.676	Gasterosteus_aculeatus
ENSORLG00015019747	xrn2	99	70.656	ENSGAGG00000004884	XRN2	98	70.864	Gopherus_agassizii
ENSORLG00015019747	xrn2	100	69.796	ENSGGOG00000013738	XRN2	98	70.093	Gorilla_gorilla
ENSORLG00015019747	xrn2	54	87.548	ENSHBUG00000005077	xrn2	94	87.548	Haplochromis_burtoni
ENSORLG00015019747	xrn2	100	68.737	ENSHGLG00000014831	XRN2	98	69.055	Heterocephalus_glaber_female
ENSORLG00015019747	xrn2	100	68.737	ENSHGLG00100013130	XRN2	98	69.055	Heterocephalus_glaber_male
ENSORLG00015019747	xrn2	99	79.275	ENSHCOG00000011994	xrn2	98	79.793	Hippocampus_comes
ENSORLG00015019747	xrn2	100	77.913	ENSIPUG00000006639	xrn2	99	77.984	Ictalurus_punctatus
ENSORLG00015019747	xrn2	100	69.654	ENSSTOG00000000589	XRN2	98	69.990	Ictidomys_tridecemlineatus
ENSORLG00015019747	xrn2	100	70.204	ENSJJAG00000022128	Xrn2	98	70.509	Jaculus_jaculus
ENSORLG00015019747	xrn2	54	86.948	ENSLBEG00000010041	xrn2	100	86.948	Labrus_bergylta
ENSORLG00015019747	xrn2	94	72.035	ENSLACG00000008307	XRN2	97	75.092	Latimeria_chalumnae
ENSORLG00015019747	xrn2	100	72.041	ENSLOCG00000016874	xrn2	93	80.000	Lepisosteus_oculatus
ENSORLG00015019747	xrn2	100	70.204	ENSLAFG00000014624	XRN2	98	70.509	Loxodonta_africana
ENSORLG00015019747	xrn2	100	69.796	ENSMFAG00000038122	XRN2	98	70.093	Macaca_fascicularis
ENSORLG00015019747	xrn2	100	69.796	ENSMMUG00000011405	XRN2	98	70.093	Macaca_mulatta
ENSORLG00015019747	xrn2	100	69.898	ENSMNEG00000040626	XRN2	98	70.197	Macaca_nemestrina
ENSORLG00015019747	xrn2	100	69.694	ENSMLEG00000041897	XRN2	98	69.990	Mandrillus_leucophaeus
ENSORLG00015019747	xrn2	96	86.087	ENSMAMG00000008633	xrn2	99	84.864	Mastacembelus_armatus
ENSORLG00015019747	xrn2	90	87.673	ENSMZEG00005022362	xrn2	98	87.673	Maylandia_zebra
ENSORLG00015019747	xrn2	99	68.648	ENSMGAG00000003196	XRN2	97	69.799	Meleagris_gallopavo
ENSORLG00015019747	xrn2	100	70.367	ENSMAUG00000021842	Xrn2	98	70.717	Mesocricetus_auratus
ENSORLG00015019747	xrn2	100	69.521	ENSMICG00000008126	XRN2	98	69.854	Microcebus_murinus
ENSORLG00015019747	xrn2	100	69.725	ENSMOCG00000012588	Xrn2	98	70.208	Microtus_ochrogaster
ENSORLG00015019747	xrn2	90	84.205	ENSMMOG00000017576	xrn2	97	84.205	Mola_mola
ENSORLG00015019747	xrn2	100	70.582	ENSMODG00000006163	XRN2	98	70.951	Monodelphis_domestica
ENSORLG00015019747	xrn2	91	83.845	ENSMALG00000011355	xrn2	95	89.827	Monopterus_albus
ENSORLG00015019747	xrn2	100	70.397	MGP_CAROLIEiJ_G0024400	Xrn2	98	70.747	Mus_caroli
ENSORLG00015019747	xrn2	100	70.397	ENSMUSG00000027433	Xrn2	98	70.747	Mus_musculus
ENSORLG00015019747	xrn2	100	70.295	MGP_PahariEiJ_G0025843	Xrn2	98	70.643	Mus_pahari
ENSORLG00015019747	xrn2	100	70.397	MGP_SPRETEiJ_G0025318	Xrn2	94	83.838	Mus_spretus
ENSORLG00015019747	xrn2	100	68.337	ENSMPUG00000001198	XRN2	92	68.641	Mustela_putorius_furo
ENSORLG00015019747	xrn2	100	69.459	ENSMLUG00000001536	XRN2	98	69.751	Myotis_lucifugus
ENSORLG00015019747	xrn2	100	70.612	ENSNGAG00000018138	Xrn2	98	70.924	Nannospalax_galili
ENSORLG00015019747	xrn2	90	87.788	ENSNBRG00000008062	xrn2	98	87.788	Neolamprologus_brichardi
ENSORLG00015019747	xrn2	100	69.796	ENSNLEG00000009991	XRN2	98	70.093	Nomascus_leucogenys
ENSORLG00015019747	xrn2	51	86.667	ENSMEUG00000008622	-	53	86.667	Notamacropus_eugenii
ENSORLG00015019747	xrn2	75	72.632	ENSOPRG00000001397	-	75	72.632	Ochotona_princeps
ENSORLG00015019747	xrn2	98	63.941	ENSODEG00000000860	-	99	63.848	Octodon_degus
ENSORLG00015019747	xrn2	100	69.756	ENSODEG00000010745	-	98	70.093	Octodon_degus
ENSORLG00015019747	xrn2	100	82.591	ENSONIG00000018720	xrn2	98	81.913	Oreochromis_niloticus
ENSORLG00015019747	xrn2	100	69.675	ENSOANG00000015673	XRN2	98	69.335	Ornithorhynchus_anatinus
ENSORLG00015019747	xrn2	100	69.959	ENSOCUG00000013468	XRN2	98	70.301	Oryctolagus_cuniculus
ENSORLG00015019747	xrn2	100	98.868	ENSORLG00000017213	xrn2	100	98.868	Oryzias_latipes
ENSORLG00015019747	xrn2	100	98.868	ENSORLG00020001824	xrn2	100	98.868	Oryzias_latipes_hni
ENSORLG00015019747	xrn2	98	92.365	ENSOMEG00000019820	xrn2	98	92.797	Oryzias_melastigma
ENSORLG00015019747	xrn2	100	69.857	ENSOGAG00000001068	XRN2	98	70.197	Otolemur_garnettii
ENSORLG00015019747	xrn2	97	69.017	ENSOARG00000004443	XRN2	98	69.050	Ovis_aries
ENSORLG00015019747	xrn2	100	69.796	ENSPPAG00000033549	XRN2	98	70.093	Pan_paniscus
ENSORLG00015019747	xrn2	100	69.654	ENSPPRG00000008732	XRN2	98	69.990	Panthera_pardus
ENSORLG00015019747	xrn2	97	69.338	ENSPTIG00000015683	XRN2	96	69.370	Panthera_tigris_altaica
ENSORLG00015019747	xrn2	100	69.796	ENSPTRG00000013308	XRN2	98	70.093	Pan_troglodytes
ENSORLG00015019747	xrn2	100	69.796	ENSPANG00000018088	XRN2	98	70.093	Papio_anubis
ENSORLG00015019747	xrn2	100	76.656	ENSPKIG00000016889	xrn2	98	76.629	Paramormyrops_kingsleyae
ENSORLG00015019747	xrn2	81	75.225	ENSPSIG00000014666	XRN2	100	75.225	Pelodiscus_sinensis
ENSORLG00015019747	xrn2	100	70.163	ENSPEMG00000000111	Xrn2	98	70.509	Peromyscus_maniculatus_bairdii
ENSORLG00015019747	xrn2	100	81.967	ENSPFOG00000004182	xrn2	98	82.500	Poecilia_formosa
ENSORLG00015019747	xrn2	91	85.829	ENSPLAG00000007351	xrn2	98	85.829	Poecilia_latipinna
ENSORLG00015019747	xrn2	94	81.909	ENSPMEG00000011798	xrn2	98	81.567	Poecilia_mexicana
ENSORLG00015019747	xrn2	91	86.483	ENSPREG00000012452	xrn2	98	86.483	Poecilia_reticulata
ENSORLG00015019747	xrn2	100	69.254	ENSPPYG00000010755	XRN2	98	69.543	Pongo_abelii
ENSORLG00015019747	xrn2	100	65.784	ENSPCAG00000011191	XRN2	98	66.250	Procavia_capensis
ENSORLG00015019747	xrn2	100	63.914	ENSPCOG00000016468	XRN2	98	64.137	Propithecus_coquereli
ENSORLG00015019747	xrn2	93	66.135	ENSPVAG00000004596	XRN2	91	66.135	Pteropus_vampyrus
ENSORLG00015019747	xrn2	90	85.829	ENSPNYG00000001765	xrn2	98	85.829	Pundamilia_nyererei
ENSORLG00015019747	xrn2	100	77.992	ENSPNAG00000010956	xrn2	98	78.527	Pygocentrus_nattereri
ENSORLG00015019747	xrn2	100	70.498	ENSRNOG00000011785	Xrn2	98	70.851	Rattus_norvegicus
ENSORLG00015019747	xrn2	86	75.692	ENSRBIG00000036193	XRN2	100	75.692	Rhinopithecus_bieti
ENSORLG00015019747	xrn2	100	69.796	ENSRROG00000044400	XRN2	89	70.093	Rhinopithecus_roxellana
ENSORLG00015019747	xrn2	89	52.546	YOR048C	RAT1	80	53.382	Saccharomyces_cerevisiae
ENSORLG00015019747	xrn2	100	70.000	ENSSBOG00000021014	XRN2	98	70.301	Saimiri_boliviensis_boliviensis
ENSORLG00015019747	xrn2	100	77.049	ENSSFOG00015001091	xrn2	98	77.396	Scleropages_formosus
ENSORLG00015019747	xrn2	91	86.007	ENSSMAG00000007834	xrn2	98	83.091	Scophthalmus_maximus
ENSORLG00015019747	xrn2	96	82.651	ENSSDUG00000012802	xrn2	99	85.779	Seriola_dumerili
ENSORLG00015019747	xrn2	93	87.627	ENSSLDG00000021273	xrn2	100	87.627	Seriola_lalandi_dorsalis
ENSORLG00015019747	xrn2	68	96.000	ENSSARG00000005859	-	66	96.000	Sorex_araneus
ENSORLG00015019747	xrn2	96	69.785	ENSSPUG00000005485	XRN2	94	69.817	Sphenodon_punctatus
ENSORLG00015019747	xrn2	100	83.897	ENSSPAG00000016027	xrn2	98	84.639	Stegastes_partitus
ENSORLG00015019747	xrn2	100	68.432	ENSSSCG00000007109	XRN2	98	68.744	Sus_scrofa
ENSORLG00015019747	xrn2	95	70.936	ENSTGUG00000007535	XRN2	96	70.936	Taeniopygia_guttata
ENSORLG00015019747	xrn2	100	79.435	ENSTRUG00000015489	xrn2	98	80.615	Takifugu_rubripes
ENSORLG00015019747	xrn2	100	76.118	ENSTNIG00000010712	xrn2	94	80.044	Tetraodon_nigroviridis
ENSORLG00015019747	xrn2	100	69.654	ENSTBEG00000004119	XRN2	98	69.990	Tupaia_belangeri
ENSORLG00015019747	xrn2	93	78.345	ENSTTRG00000009087	XRN2	91	78.345	Tursiops_truncatus
ENSORLG00015019747	xrn2	100	69.857	ENSUAMG00000024634	XRN2	94	86.618	Ursus_americanus
ENSORLG00015019747	xrn2	97	69.444	ENSUMAG00000004012	XRN2	93	69.477	Ursus_maritimus
ENSORLG00015019747	xrn2	82	84.466	ENSVPAG00000010694	XRN2	83	84.466	Vicugna_pacos
ENSORLG00015019747	xrn2	100	69.857	ENSVVUG00000012178	XRN2	98	70.197	Vulpes_vulpes
ENSORLG00015019747	xrn2	100	69.239	ENSXETG00000023501	xrn2	90	76.313	Xenopus_tropicalis
ENSORLG00015019747	xrn2	100	82.070	ENSXMAG00000000242	xrn2	92	89.294	Xiphophorus_maculatus