EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015019797 (Gene tree)
Gene ID: -
Gene Symbol: gpatch8
Alias: -
Full Name: G patch domain containing 8
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 29170 bases
Position: chr8:7109406-7138575
Accession: ZDB-GENE-030131-6966
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015018708	zf-C2H2_jaz	PF12171.8	5.5e-06	1	1
ENSORLP00015034049	zf-C2H2_jaz	PF12171.8	5.6e-06	1	1
ENSORLP00015018721	zf-C2H2_jaz	PF12171.8	5.8e-06	1	1
ENSORLP00015018733	zf-C2H2_jaz	PF12171.8	5.9e-06	1	1
ENSORLP00015018721	G-patch	PF01585.23	5.5e-13	1	1
ENSORLP00015018733	G-patch	PF01585.23	5.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015027506	-	9276	-	ENSORLP00015034049	1431 (aa)	-	-
ENSORLT00015035281	-	9452	-	ENSORLP00015018733	1494 (aa)	-	-
ENSORLT00015035273	-	9282	-	ENSORLP00015018721	1473 (aa)	-	-
ENSORLT00015035263	-	9264	-	ENSORLP00015018708	1415 (aa)	-	-

Gene Model

Click here to download ENSORLG00015019797's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015019797's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015019797	gpatch8	100	79.894	ENSACIG00000012241	gpatch8	56	76.185	Amphilophus_citrinellus
ENSORLG00015019797	gpatch8	61	73.239	ENSATEG00000003247	gpatch8	56	72.123	Anabas_testudineus
ENSORLG00015019797	gpatch8	52	50.121	ENSAPLG00000003095	GPATCH8	51	49.636	Anas_platyrhynchos
ENSORLG00015019797	gpatch8	100	79.920	ENSACLG00000004165	gpatch8	56	74.822	Astatotilapia_calliptera
ENSORLG00015019797	gpatch8	56	74.493	ENSCVAG00000013477	gpatch8	61	76.004	Cyprinodon_variegatus
ENSORLG00015019797	gpatch8	100	61.154	ENSDARG00000059768	gpatch8	56	58.057	Danio_rerio
ENSORLG00015019797	gpatch8	100	63.485	ENSELUG00000019920	gpatch8	57	62.002	Esox_lucius
ENSORLG00015019797	gpatch8	71	58.306	ENSFALG00000009554	GPATCH8	54	59.291	Ficedula_albicollis
ENSORLG00015019797	gpatch8	56	71.548	ENSFHEG00000005791	gpatch8	56	72.479	Fundulus_heteroclitus
ENSORLG00015019797	gpatch8	56	74.639	ENSGAFG00000018138	gpatch8	61	76.253	Gambusia_affinis
ENSORLG00015019797	gpatch8	100	79.628	ENSHBUG00000002669	gpatch8	56	75.030	Haplochromis_burtoni
ENSORLG00015019797	gpatch8	78	55.130	ENSHGLG00100010738	GPATCH8	66	61.157	Heterocephalus_glaber_male
ENSORLG00015019797	gpatch8	61	69.631	ENSHCOG00000017518	gpatch8	56	69.002	Hippocampus_comes
ENSORLG00015019797	gpatch8	61	61.985	ENSIPUG00000015431	gpatch8	55	61.839	Ictalurus_punctatus
ENSORLG00015019797	gpatch8	56	76.105	ENSKMAG00000018364	gpatch8	56	76.639	Kryptolebias_marmoratus
ENSORLG00015019797	gpatch8	61	80.172	ENSLOCG00000012265	gpatch8	72	75.177	Lepisosteus_oculatus
ENSORLG00015019797	gpatch8	100	80.253	ENSMZEG00005022584	gpatch8	56	74.941	Maylandia_zebra
ENSORLG00015019797	gpatch8	61	75.705	ENSMMOG00000020472	gpatch8	55	74.466	Mola_mola
ENSORLG00015019797	gpatch8	100	77.830	ENSMALG00000004204	gpatch8	100	78.029	Monopterus_albus
ENSORLG00015019797	gpatch8	100	80.159	ENSNBRG00000016402	gpatch8	96	78.878	Neolamprologus_brichardi
ENSORLG00015019797	gpatch8	100	77.209	ENSONIG00000001292	gpatch8	55	70.261	Oreochromis_niloticus
ENSORLG00015019797	gpatch8	100	99.331	ENSORLG00000028497	gpatch8	100	99.331	Oryzias_latipes
ENSORLG00015019797	gpatch8	100	98.929	ENSORLG00020006656	gpatch8	100	98.929	Oryzias_latipes_hni
ENSORLG00015019797	gpatch8	53	56.404	ENSPKIG00000004860	GPATCH8	51	56.810	Paramormyrops_kingsleyae
ENSORLG00015019797	gpatch8	61	52.866	ENSPKIG00000018753	gpatch8	56	54.419	Paramormyrops_kingsleyae
ENSORLG00015019797	gpatch8	56	74.700	ENSPFOG00000014833	gpatch8	61	76.522	Poecilia_formosa
ENSORLG00015019797	gpatch8	56	74.700	ENSPLAG00000001035	gpatch8	61	76.522	Poecilia_latipinna
ENSORLG00015019797	gpatch8	56	74.820	ENSPMEG00000024032	gpatch8	61	76.630	Poecilia_mexicana
ENSORLG00015019797	gpatch8	56	74.460	ENSPREG00000008911	gpatch8	61	76.413	Poecilia_reticulata
ENSORLG00015019797	gpatch8	100	79.588	ENSPNYG00000009426	gpatch8	56	74.822	Pundamilia_nyererei
ENSORLG00015019797	gpatch8	59	60.642	ENSPNAG00000016200	gpatch8	58	62.416	Pygocentrus_nattereri
ENSORLG00015019797	gpatch8	62	59.028	ENSRNOG00000021044	Gpatch8	54	62.403	Rattus_norvegicus
ENSORLG00015019797	gpatch8	54	57.421	ENSSFOG00015004299	GPATCH8	53	57.767	Scleropages_formosus
ENSORLG00015019797	gpatch8	61	68.723	ENSTRUG00000020474	gpatch8	59	67.001	Takifugu_rubripes
ENSORLG00015019797	gpatch8	58	59.375	ENSTBEG00000009486	GPATCH8	55	62.791	Tupaia_belangeri
ENSORLG00015019797	gpatch8	56	74.105	ENSXCOG00000016680	gpatch8	61	76.082	Xiphophorus_couchianus
ENSORLG00015019797	gpatch8	56	74.282	ENSXMAG00000009217	gpatch8	61	76.030	Xiphophorus_maculatus