EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSORLG00015019876 (Gene tree)
Gene ID
-
Gene Symbol
atxn1b
Alias
-
Full Name
ataxin 1b
Gene Type
protein_coding
Species
Oryzias_latipes_hsok
Status
putative
Strand
Plus strand
Length
11566 bases
Position
chr16:17265879-17277444
Accession
ZDB-GENE-061218-2
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00015018805AXHPF08517.124.9e-4111
ENSORLP00015034094AXHPF08517.124.9e-4111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00015027585-3116-ENSORLP00015034094827 (aa)--
ENSORLT00015035305-3012-ENSORLP00015018805827 (aa)--
Gene Model
Click here to download ENSORLG00015019876's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015019876's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSORLG00015019876atxn1b9937.757ENSORLG00015014668atxn1a9937.385
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00015019876atxn1b9937.378ENSG00000124788ATXN19937.935Homo_sapiens
ENSORLG00015019876atxn1b9939.977ENSAPOG00000018662atxn1a9940.474Acanthochromis_polyacanthus
ENSORLG00015019876atxn1b10080.649ENSAPOG00000005003atxn1b10080.769Acanthochromis_polyacanthus
ENSORLG00015019876atxn1b9938.186ENSAMEG00000004299ATXN19938.600Ailuropoda_melanoleuca
ENSORLG00015019876atxn1b8482.759ENSACIG00000016088atxn1a9682.759Amphilophus_citrinellus
ENSORLG00015019876atxn1b10070.012ENSACIG00000014661atxn1b10070.012Amphilophus_citrinellus
ENSORLG00015019876atxn1b9940.387ENSAOCG00000015796atxn1a9940.479Amphiprion_ocellaris
ENSORLG00015019876atxn1b10080.361ENSAOCG00000019715atxn1b10080.482Amphiprion_ocellaris
ENSORLG00015019876atxn1b9940.703ENSAPEG00000011313atxn1a9940.914Amphiprion_percula
ENSORLG00015019876atxn1b10080.361ENSAPEG00000022436atxn1b10080.482Amphiprion_percula
ENSORLG00015019876atxn1b9941.040ENSATEG00000013601atxn1a9940.694Anabas_testudineus
ENSORLG00015019876atxn1b10078.606ENSATEG00000002982atxn1b10078.606Anabas_testudineus
ENSORLG00015019876atxn1b9937.896ENSACAG00000003919ATXN19937.896Anolis_carolinensis
ENSORLG00015019876atxn1b9838.746ENSANAG00000025206-9539.213Aotus_nancymaae
ENSORLG00015019876atxn1b7636.691ENSANAG00000025424-9637.139Aotus_nancymaae
ENSORLG00015019876atxn1b9939.091ENSACLG00000015429atxn1a9938.776Astatotilapia_calliptera
ENSORLG00015019876atxn1b10079.376ENSACLG00000005697atxn1b10079.376Astatotilapia_calliptera
ENSORLG00015019876atxn1b9839.760ENSAMXG00000017432atxn1b9840.022Astyanax_mexicanus
ENSORLG00015019876atxn1b9941.109ENSAMXG00000042368atxn1a9942.857Astyanax_mexicanus
ENSORLG00015019876atxn1b9937.694ENSBTAG00000019675ATXN19938.932Bos_taurus
ENSORLG00015019876atxn1b9838.522ENSCJAG00000006563ATXN19338.989Callithrix_jacchus
ENSORLG00015019876atxn1b9938.764ENSCAFG00000009934ATXN19939.077Canis_familiaris
ENSORLG00015019876atxn1b9838.641ENSCAFG00020012647ATXN19538.951Canis_lupus_dingo
ENSORLG00015019876atxn1b9937.946ENSCHIG00000018697ATXN19938.728Capra_hircus
ENSORLG00015019876atxn1b6152.128ENSTSYG00000000858ATXN19947.238Carlito_syrichta
ENSORLG00015019876atxn1b9938.255ENSCAPG00000013095ATXN19938.901Cavia_aperea
ENSORLG00015019876atxn1b9938.600ENSCPOG00000022869ATXN19939.253Cavia_porcellus
ENSORLG00015019876atxn1b9938.746ENSCCAG00000018590ATXN19939.326Cebus_capucinus
ENSORLG00015019876atxn1b9937.996ENSCATG00000042777ATXN19938.674Cercocebus_atys
ENSORLG00015019876atxn1b9939.008ENSCLAG00000002212ATXN19939.661Chinchilla_lanigera
ENSORLG00015019876atxn1b9938.079ENSCSAG00000007589ATXN19938.760Chlorocebus_sabaeus
ENSORLG00015019876atxn1b9938.695ENSCPBG00000022373ATXN19939.414Chrysemys_picta_bellii
ENSORLG00015019876atxn1b9938.137ENSCANG00000033673ATXN19938.821Colobus_angolensis_palliatus
ENSORLG00015019876atxn1b9938.212ENSCGRG00001022108Atxn19938.858Cricetulus_griseus_chok1gshd
ENSORLG00015019876atxn1b9938.557ENSCGRG00000014084Atxn19939.209Cricetulus_griseus_crigri
ENSORLG00015019876atxn1b10073.100ENSCSEG00000004666atxn1b10073.221Cynoglossus_semilaevis
ENSORLG00015019876atxn1b9938.031ENSCSEG00000017647atxn1a9939.159Cynoglossus_semilaevis
ENSORLG00015019876atxn1b9939.747ENSCVAG00000023240atxn1a9939.862Cyprinodon_variegatus
ENSORLG00015019876atxn1b10077.404ENSCVAG00000010945atxn1b10077.404Cyprinodon_variegatus
ENSORLG00015019876atxn1b9940.000ENSDARG00000061687atxn1a9941.733Danio_rerio
ENSORLG00015019876atxn1b9940.552ENSDARG00000060862atxn1b9940.773Danio_rerio
ENSORLG00015019876atxn1b5845.181ENSDNOG00000048471ATXN19244.848Dasypus_novemcinctus
ENSORLG00015019876atxn1b9936.947ENSDORG00000005940Atxn19936.755Dipodomys_ordii
ENSORLG00015019876atxn1b8242.512ENSETEG00000003815ATXN18744.186Echinops_telfairi
ENSORLG00015019876atxn1b9938.436ENSEASG00005011799ATXN19938.742Equus_asinus_asinus
ENSORLG00015019876atxn1b9938.326ENSECAG00000009251ATXN19938.803Equus_caballus
ENSORLG00015019876atxn1b9938.889ENSEEUG00000007120ATXN19938.864Erinaceus_europaeus
ENSORLG00015019876atxn1b9262.712ENSELUG00000001311atxn1b7862.712Esox_lucius
ENSORLG00015019876atxn1b9837.691ENSELUG00000003691atxn1a9637.554Esox_lucius
ENSORLG00015019876atxn1b9937.896ENSFCAG00000011298ATXN19938.209Felis_catus
ENSORLG00015019876atxn1b9939.033ENSFALG00000013400ATXN19939.616Ficedula_albicollis
ENSORLG00015019876atxn1b9044.609ENSFDAG00000020905ATXN19937.193Fukomys_damarensis
ENSORLG00015019876atxn1b9938.933ENSFHEG00000019419atxn1a9938.583Fundulus_heteroclitus
ENSORLG00015019876atxn1b10077.043ENSFHEG00000017226atxn1b10076.923Fundulus_heteroclitus
ENSORLG00015019876atxn1b9957.485ENSGMOG00000013508atxn1b10057.485Gadus_morhua
ENSORLG00015019876atxn1b9940.000ENSGALG00000012709ATXN19940.522Gallus_gallus
ENSORLG00015019876atxn1b10076.351ENSGAFG00000007295atxn1b10076.591Gambusia_affinis
ENSORLG00015019876atxn1b9939.225ENSGAFG00000010544atxn1a9939.135Gambusia_affinis
ENSORLG00015019876atxn1b9968.659ENSGACG00000008747atxn1b10068.659Gasterosteus_aculeatus
ENSORLG00015019876atxn1b9939.576ENSGACG00000003472atxn1a9938.934Gasterosteus_aculeatus
ENSORLG00015019876atxn1b9938.117ENSGAGG00000006868ATXN19938.670Gopherus_agassizii
ENSORLG00015019876atxn1b9937.596ENSGGOG00000004169ATXN19938.158Gorilla_gorilla
ENSORLG00015019876atxn1b9939.205ENSHBUG00000002508atxn1a9938.889Haplochromis_burtoni
ENSORLG00015019876atxn1b10079.496ENSHBUG00000016081atxn1b10079.496Haplochromis_burtoni
ENSORLG00015019876atxn1b9939.165ENSHGLG00000009360ATXN19939.367Heterocephalus_glaber_female
ENSORLG00015019876atxn1b9939.165ENSHGLG00100003038ATXN19939.367Heterocephalus_glaber_male
ENSORLG00015019876atxn1b9973.341ENSHCOG00000014835atxn1b9973.462Hippocampus_comes
ENSORLG00015019876atxn1b8741.340ENSHCOG00000019032atxn1a9941.340Hippocampus_comes
ENSORLG00015019876atxn1b9940.000ENSIPUG00000001402atxn19940.184Ictalurus_punctatus
ENSORLG00015019876atxn1b9943.080ENSIPUG00000002088atxn1b10042.730Ictalurus_punctatus
ENSORLG00015019876atxn1b9939.414ENSSTOG00000025423ATXN19939.842Ictidomys_tridecemlineatus
ENSORLG00015019876atxn1b9937.892ENSJJAG00000000377Atxn19938.117Jaculus_jaculus
ENSORLG00015019876atxn1b9938.322ENSKMAG00000007216atxn1a9938.427Kryptolebias_marmoratus
ENSORLG00015019876atxn1b9979.030ENSKMAG00000013507atxn1b9978.909Kryptolebias_marmoratus
ENSORLG00015019876atxn1b9939.071ENSLBEG00000024388atxn1a9939.729Labrus_bergylta
ENSORLG00015019876atxn1b10075.656ENSLBEG00000024264atxn1b10075.418Labrus_bergylta
ENSORLG00015019876atxn1b9939.189ENSLACG00000005371ATXN19939.174Latimeria_chalumnae
ENSORLG00015019876atxn1b9944.764ENSLOCG00000002910atxn1a9944.356Lepisosteus_oculatus
ENSORLG00015019876atxn1b9938.706ENSLAFG00000015231ATXN19938.680Loxodonta_africana
ENSORLG00015019876atxn1b9937.939ENSMFAG00000032779ATXN19938.589Macaca_fascicularis
ENSORLG00015019876atxn1b9937.912ENSMMUG00000002940ATXN19938.589Macaca_mulatta
ENSORLG00015019876atxn1b9938.022ENSMNEG00000036667ATXN19938.674Macaca_nemestrina
ENSORLG00015019876atxn1b7540.448ENSMLEG00000040480ATXN19739.700Mandrillus_leucophaeus
ENSORLG00015019876atxn1b10079.137ENSMAMG00000011503atxn1b10079.137Mastacembelus_armatus
ENSORLG00015019876atxn1b9940.339ENSMAMG00000014004atxn1a9940.586Mastacembelus_armatus
ENSORLG00015019876atxn1b10079.376ENSMZEG00005015064atxn1b10079.376Maylandia_zebra
ENSORLG00015019876atxn1b9939.091ENSMZEG00005003602atxn1a9938.776Maylandia_zebra
ENSORLG00015019876atxn1b9938.662ENSMGAG00000003028ATXN19938.958Meleagris_gallopavo
ENSORLG00015019876atxn1b9938.634ENSMAUG00000011491Atxn19939.169Mesocricetus_auratus
ENSORLG00015019876atxn1b9938.739ENSMICG00000011875ATXN19939.052Microcebus_murinus
ENSORLG00015019876atxn1b9939.052ENSMOCG00000001527Atxn19939.638Microtus_ochrogaster
ENSORLG00015019876atxn1b9375.789ENSMMOG00000002884atxn1b10075.789Mola_mola
ENSORLG00015019876atxn1b9939.527ENSMMOG00000018593atxn1a9940.339Mola_mola
ENSORLG00015019876atxn1b9938.504ENSMODG00000010827ATXN19938.258Monodelphis_domestica
ENSORLG00015019876atxn1b9939.706ENSMALG00000005209atxn1a9940.157Monopterus_albus
ENSORLG00015019876atxn1b9979.878ENSMALG00000012137atxn1b9979.878Monopterus_albus
ENSORLG00015019876atxn1b9939.008MGP_CAROLIEiJ_G0018479Atxn19939.209Mus_caroli
ENSORLG00015019876atxn1b9939.052ENSMUSG00000046876Atxn19939.253Mus_musculus
ENSORLG00015019876atxn1b9939.165MGP_PahariEiJ_G0019546Atxn19939.367Mus_pahari
ENSORLG00015019876atxn1b9939.052MGP_SPRETEiJ_G0019357Atxn19939.253Mus_spretus
ENSORLG00015019876atxn1b9938.212ENSMPUG00000005398ATXN19938.272Mustela_putorius_furo
ENSORLG00015019876atxn1b9939.111ENSMLUG00000000896ATXN19939.262Myotis_lucifugus
ENSORLG00015019876atxn1b9938.350ENSNGAG00000020481Atxn19938.958Nannospalax_galili
ENSORLG00015019876atxn1b10071.947ENSNBRG00000014776atxn1b10072.430Neolamprologus_brichardi
ENSORLG00015019876atxn1b9939.408ENSNBRG00000013216atxn1a9938.933Neolamprologus_brichardi
ENSORLG00015019876atxn1b9938.326ENSNLEG00000001064ATXN19938.785Nomascus_leucogenys
ENSORLG00015019876atxn1b9936.942ENSMEUG00000014680ATXN19736.577Notamacropus_eugenii
ENSORLG00015019876atxn1b9938.789ENSODEG00000006297ATXN19939.686Octodon_degus
ENSORLG00015019876atxn1b10079.616ENSONIG00000003094atxn1b10079.616Oreochromis_niloticus
ENSORLG00015019876atxn1b8933.174ENSOANG00000011866ATXN19734.217Ornithorhynchus_anatinus
ENSORLG00015019876atxn1b9939.459ENSOCUG00000015360ATXN19939.887Oryctolagus_cuniculus
ENSORLG00015019876atxn1b9937.884ENSORLG00000013003atxn1a9938.470Oryzias_latipes
ENSORLG00015019876atxn1b10098.670ENSORLG00000008288atxn1b10098.670Oryzias_latipes
ENSORLG00015019876atxn1b9937.414ENSORLG00020006722atxn1a9936.583Oryzias_latipes_hni
ENSORLG00015019876atxn1b10098.191ENSORLG00020013514atxn1b10098.191Oryzias_latipes_hni
ENSORLG00015019876atxn1b9937.313ENSOMEG00000012883atxn1a9838.780Oryzias_melastigma
ENSORLG00015019876atxn1b10093.229ENSOMEG00000003259atxn1b10093.229Oryzias_melastigma
ENSORLG00015019876atxn1b9938.539ENSOGAG00000028623ATXN110038.964Otolemur_garnettii
ENSORLG00015019876atxn1b7040.700ENSOARG00000012141ATXN17939.791Ovis_aries
ENSORLG00015019876atxn1b9937.500ENSPPAG00000028993ATXN19938.059Pan_paniscus
ENSORLG00015019876atxn1b9938.744ENSPPRG00000004547ATXN19739.574Panthera_pardus
ENSORLG00015019876atxn1b9937.650ENSPTRG00000039250ATXN19938.184Pan_troglodytes
ENSORLG00015019876atxn1b9937.912ENSPANG00000024249ATXN110038.394Papio_anubis
ENSORLG00015019876atxn1b9944.587ENSPKIG00000018323atxn1b9945.296Paramormyrops_kingsleyae
ENSORLG00015019876atxn1b7336.024ENSPSIG00000007158ATXN19236.377Pelodiscus_sinensis
ENSORLG00015019876atxn1b7040.741ENSPMGG00000022926atxn1a7041.077Periophthalmus_magnuspinnatus
ENSORLG00015019876atxn1b9961.783ENSPMGG00000013610atxn1b9964.591Periophthalmus_magnuspinnatus
ENSORLG00015019876atxn1b9938.324ENSPEMG00000014930Atxn19938.858Peromyscus_maniculatus_bairdii
ENSORLG00015019876atxn1b9938.206ENSPCIG00000019413ATXN19938.095Phascolarctos_cinereus
ENSORLG00015019876atxn1b9938.444ENSPFOG00000014422atxn1a9939.498Poecilia_formosa
ENSORLG00015019876atxn1b8571.429ENSPLAG00000018978atxn1a9572.549Poecilia_latipinna
ENSORLG00015019876atxn1b10077.671ENSPLAG00000018703atxn1b10077.671Poecilia_latipinna
ENSORLG00015019876atxn1b10077.431ENSPMEG00000023723atxn1b10077.431Poecilia_mexicana
ENSORLG00015019876atxn1b9938.902ENSPMEG00000002647atxn1a9939.429Poecilia_mexicana
ENSORLG00015019876atxn1b9939.435ENSPREG00000008333atxn1a9939.616Poecilia_reticulata
ENSORLG00015019876atxn1b10077.911ENSPREG00000020308atxn1b10077.911Poecilia_reticulata
ENSORLG00015019876atxn1b9937.432ENSPPYG00000016254ATXN19937.991Pongo_abelii
ENSORLG00015019876atxn1b6249.442ENSPCAG00000008196ATXN16049.442Procavia_capensis
ENSORLG00015019876atxn1b9938.851ENSPCOG00000013612ATXN19938.939Propithecus_coquereli
ENSORLG00015019876atxn1b8939.103ENSPVAG00000016937ATXN18639.904Pteropus_vampyrus
ENSORLG00015019876atxn1b10071.947ENSPNYG00000017095atxn1b10072.672Pundamilia_nyererei
ENSORLG00015019876atxn1b9938.977ENSPNYG00000011920atxn1a9938.662Pundamilia_nyererei
ENSORLG00015019876atxn1b9941.592ENSPNAG00000010587atxn1a9942.177Pygocentrus_nattereri
ENSORLG00015019876atxn1b9940.753ENSPNAG00000001226atxn1b10040.552Pygocentrus_nattereri
ENSORLG00015019876atxn1b9938.870ENSRNOG00000016998Atxn19939.071Rattus_norvegicus
ENSORLG00015019876atxn1b9937.829ENSRBIG00000028213ATXN19938.284Rhinopithecus_bieti
ENSORLG00015019876atxn1b9938.011ENSRROG00000032751ATXN19938.496Rhinopithecus_roxellana
ENSORLG00015019876atxn1b7535.852ENSSBOG00000030307-9135.484Saimiri_boliviensis_boliviensis
ENSORLG00015019876atxn1b9938.436ENSSBOG00000017381-9939.350Saimiri_boliviensis_boliviensis
ENSORLG00015019876atxn1b9943.572ENSSFOG00015000179atxn1b9943.311Scleropages_formosus
ENSORLG00015019876atxn1b9151.601ENSSFOG00015005189atxn19943.158Scleropages_formosus
ENSORLG00015019876atxn1b10078.204ENSSMAG00000019621atxn1b10078.204Scophthalmus_maximus
ENSORLG00015019876atxn1b9739.055ENSSMAG00000007731atxn1a9439.540Scophthalmus_maximus
ENSORLG00015019876atxn1b9940.538ENSSDUG00000011376atxn1a9941.395Seriola_dumerili
ENSORLG00015019876atxn1b10081.175ENSSDUG00000006990atxn1b10081.415Seriola_dumerili
ENSORLG00015019876atxn1b9940.538ENSSLDG00000013505atxn1a9941.395Seriola_lalandi_dorsalis
ENSORLG00015019876atxn1b10081.295ENSSLDG00000016306atxn1b10081.535Seriola_lalandi_dorsalis
ENSORLG00015019876atxn1b9938.453ENSSPUG00000016650ATXN19938.312Sphenodon_punctatus
ENSORLG00015019876atxn1b10081.490ENSSPAG00000003388atxn1b10081.611Stegastes_partitus
ENSORLG00015019876atxn1b9940.950ENSSPAG00000019849atxn1a9940.632Stegastes_partitus
ENSORLG00015019876atxn1b9937.707ENSSSCG00000001065ATXN19937.901Sus_scrofa
ENSORLG00015019876atxn1b9937.627ENSTGUG00000005986ATXN19937.982Taeniopygia_guttata
ENSORLG00015019876atxn1b9940.341ENSTRUG00000014645atxn1a9940.387Takifugu_rubripes
ENSORLG00015019876atxn1b9970.517ENSTRUG00000024789atxn1b9970.638Takifugu_rubripes
ENSORLG00015019876atxn1b9940.438ENSTNIG00000005089atxn1a9939.498Tetraodon_nigroviridis
ENSORLG00015019876atxn1b9968.902ENSTNIG00000018398atxn1b9968.780Tetraodon_nigroviridis
ENSORLG00015019876atxn1b9838.444ENSTTRG00000014678ATXN19638.776Tursiops_truncatus
ENSORLG00015019876atxn1b9937.808ENSUAMG00000004064ATXN19938.117Ursus_americanus
ENSORLG00015019876atxn1b5242.463ENSUMAG00000017635-9243.524Ursus_maritimus
ENSORLG00015019876atxn1b9938.556ENSVVUG00000003386ATXN19938.864Vulpes_vulpes
ENSORLG00015019876atxn1b9937.829ENSXETG00000014184atxn19938.171Xenopus_tropicalis
ENSORLG00015019876atxn1b9939.005ENSXCOG00000020061atxn1a9938.921Xiphophorus_couchianus
ENSORLG00015019876atxn1b10071.947ENSXCOG00000019714atxn1b10072.310Xiphophorus_couchianus
ENSORLG00015019876atxn1b10077.431ENSXMAG00000014270atxn1b10077.791Xiphophorus_maculatus
ENSORLG00015019876atxn1b9938.479ENSXMAG00000003615atxn1a9939.363Xiphophorus_maculatus

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