EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015020034 (Gene tree)
Gene ID: -
Gene Symbol: rpusd4
Alias: -
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 8588 bases
Position: chr5:5716856-5725443
Accession: ZDB-GENE-040801-238
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015018949	PseudoU_synth_2	PF00849.22	9e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015027789	-	5976	-	ENSORLP00015018949	399 (aa)	-	-

Gene Model

Click here to download ENSORLG00015020034's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015020034's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015020034	rpusd4	82	49.699	ENSG00000165526	RPUSD4	88	49.258	Homo_sapiens
ENSORLG00015020034	rpusd4	97	68.020	ENSAPOG00000011024	rpusd4	92	71.507	Acanthochromis_polyacanthus
ENSORLG00015020034	rpusd4	54	56.863	ENSAMEG00000005953	-	93	56.863	Ailuropoda_melanoleuca
ENSORLG00015020034	rpusd4	92	48.118	ENSAMEG00000000127	-	96	48.238	Ailuropoda_melanoleuca
ENSORLG00015020034	rpusd4	82	66.564	ENSACIG00000003533	rpusd4	96	66.361	Amphilophus_citrinellus
ENSORLG00015020034	rpusd4	96	67.092	ENSAOCG00000015409	rpusd4	92	69.919	Amphiprion_ocellaris
ENSORLG00015020034	rpusd4	96	67.092	ENSAPEG00000018935	rpusd4	92	69.919	Amphiprion_percula
ENSORLG00015020034	rpusd4	88	69.429	ENSATEG00000008059	rpusd4	87	69.429	Anabas_testudineus
ENSORLG00015020034	rpusd4	70	50.000	ENSAPLG00000013250	RPUSD4	96	50.177	Anas_platyrhynchos
ENSORLG00015020034	rpusd4	74	52.843	ENSACAG00000000189	RPUSD4	81	52.843	Anolis_carolinensis
ENSORLG00015020034	rpusd4	83	48.521	ENSANAG00000024050	RPUSD4	89	48.521	Aotus_nancymaae
ENSORLG00015020034	rpusd4	89	67.232	ENSACLG00000020996	rpusd4	91	67.232	Astatotilapia_calliptera
ENSORLG00015020034	rpusd4	90	56.198	ENSAMXG00000031479	rpusd4	99	56.198	Astyanax_mexicanus
ENSORLG00015020034	rpusd4	85	49.415	ENSBTAG00000020900	RPUSD4	91	48.034	Bos_taurus
ENSORLG00015020034	rpusd4	83	48.955	ENSCJAG00000042850	RPUSD4	83	48.955	Callithrix_jacchus
ENSORLG00015020034	rpusd4	75	53.311	ENSCAFG00000010488	RPUSD4	87	50.751	Canis_familiaris
ENSORLG00015020034	rpusd4	75	53.311	ENSCAFG00020010621	RPUSD4	87	50.751	Canis_lupus_dingo
ENSORLG00015020034	rpusd4	81	49.538	ENSCHIG00000009975	RPUSD4	87	48.538	Capra_hircus
ENSORLG00015020034	rpusd4	81	51.692	ENSTSYG00000008456	RPUSD4	85	51.692	Carlito_syrichta
ENSORLG00015020034	rpusd4	60	50.833	ENSCAPG00000006040	RPUSD4	91	50.833	Cavia_aperea
ENSORLG00015020034	rpusd4	81	52.160	ENSCPOG00000014971	RPUSD4	85	52.160	Cavia_porcellus
ENSORLG00015020034	rpusd4	81	50.000	ENSCCAG00000027838	RPUSD4	86	50.000	Cebus_capucinus
ENSORLG00015020034	rpusd4	82	48.949	ENSCATG00000041570	RPUSD4	87	48.949	Cercocebus_atys
ENSORLG00015020034	rpusd4	85	50.292	ENSCLAG00000016553	RPUSD4	87	50.292	Chinchilla_lanigera
ENSORLG00015020034	rpusd4	82	49.249	ENSCSAG00000002274	RPUSD4	87	49.249	Chlorocebus_sabaeus
ENSORLG00015020034	rpusd4	69	50.179	ENSCHOG00000010249	RPUSD4	97	50.179	Choloepus_hoffmanni
ENSORLG00015020034	rpusd4	72	53.979	ENSCPBG00000011175	RPUSD4	99	53.979	Chrysemys_picta_bellii
ENSORLG00015020034	rpusd4	83	35.988	ENSCSAVG00000000872	-	65	35.988	Ciona_savignyi
ENSORLG00015020034	rpusd4	81	49.096	ENSCANG00000039684	RPUSD4	86	49.096	Colobus_angolensis_palliatus
ENSORLG00015020034	rpusd4	83	50.298	ENSCGRG00001024141	Rpusd4	88	50.298	Cricetulus_griseus_chok1gshd
ENSORLG00015020034	rpusd4	83	50.298	ENSCGRG00000014415	Rpusd4	88	50.298	Cricetulus_griseus_crigri
ENSORLG00015020034	rpusd4	85	70.000	ENSCVAG00000008761	rpusd4	93	67.857	Cyprinodon_variegatus
ENSORLG00015020034	rpusd4	86	68.786	ENSCVAG00000000392	rpusd4	98	68.786	Cyprinodon_variegatus
ENSORLG00015020034	rpusd4	89	52.646	ENSDARG00000012674	rpusd4	97	52.646	Danio_rerio
ENSORLG00015020034	rpusd4	85	48.547	ENSDNOG00000020026	RPUSD4	90	48.547	Dasypus_novemcinctus
ENSORLG00015020034	rpusd4	76	49.186	ENSDORG00000016717	Rpusd4	88	46.746	Dipodomys_ordii
ENSORLG00015020034	rpusd4	88	49.157	ENSETEG00000013953	RPUSD4	92	49.157	Echinops_telfairi
ENSORLG00015020034	rpusd4	81	50.769	ENSEASG00005022982	RPUSD4	85	50.769	Equus_asinus_asinus
ENSORLG00015020034	rpusd4	81	51.077	ENSECAG00000000557	RPUSD4	85	51.077	Equus_caballus
ENSORLG00015020034	rpusd4	64	53.846	ENSEEUG00000014036	RPUSD4	66	55.172	Erinaceus_europaeus
ENSORLG00015020034	rpusd4	88	57.618	ENSELUG00000008075	rpusd4	94	57.618	Esox_lucius
ENSORLG00015020034	rpusd4	75	52.649	ENSFCAG00000029789	RPUSD4	87	49.850	Felis_catus
ENSORLG00015020034	rpusd4	85	46.221	ENSFALG00000005171	RPUSD4	98	46.221	Ficedula_albicollis
ENSORLG00015020034	rpusd4	83	49.552	ENSFDAG00000014307	RPUSD4	95	46.978	Fukomys_damarensis
ENSORLG00015020034	rpusd4	90	69.722	ENSFHEG00000004329	rpusd4	93	69.722	Fundulus_heteroclitus
ENSORLG00015020034	rpusd4	81	60.248	ENSGMOG00000017726	rpusd4	99	59.337	Gadus_morhua
ENSORLG00015020034	rpusd4	71	51.930	ENSGALG00000024326	RPUSD4	91	48.780	Gallus_gallus
ENSORLG00015020034	rpusd4	90	65.479	ENSGAFG00000021559	rpusd4	93	65.479	Gambusia_affinis
ENSORLG00015020034	rpusd4	83	69.369	ENSGACG00000001657	rpusd4	98	71.886	Gasterosteus_aculeatus
ENSORLG00015020034	rpusd4	89	49.162	ENSGAGG00000000132	RPUSD4	97	49.025	Gopherus_agassizii
ENSORLG00015020034	rpusd4	82	49.398	ENSGGOG00000016494	RPUSD4	88	48.961	Gorilla_gorilla
ENSORLG00015020034	rpusd4	89	67.232	ENSHBUG00000022838	rpusd4	91	67.232	Haplochromis_burtoni
ENSORLG00015020034	rpusd4	81	50.154	ENSHGLG00000002285	RPUSD4	85	50.154	Heterocephalus_glaber_female
ENSORLG00015020034	rpusd4	81	50.154	ENSHGLG00100006385	RPUSD4	85	50.154	Heterocephalus_glaber_male
ENSORLG00015020034	rpusd4	88	65.812	ENSHCOG00000006612	rpusd4	90	65.812	Hippocampus_comes
ENSORLG00015020034	rpusd4	85	55.132	ENSIPUG00000023879	rusd4	87	55.132	Ictalurus_punctatus
ENSORLG00015020034	rpusd4	81	52.000	ENSSTOG00000025280	RPUSD4	88	52.000	Ictidomys_tridecemlineatus
ENSORLG00015020034	rpusd4	80	52.012	ENSJJAG00000018673	Rpusd4	86	52.012	Jaculus_jaculus
ENSORLG00015020034	rpusd4	92	68.351	ENSKMAG00000021805	rpusd4	94	69.972	Kryptolebias_marmoratus
ENSORLG00015020034	rpusd4	84	71.045	ENSLBEG00000020394	rpusd4	93	71.045	Labrus_bergylta
ENSORLG00015020034	rpusd4	81	54.012	ENSLACG00000011028	RPUSD4	85	52.339	Latimeria_chalumnae
ENSORLG00015020034	rpusd4	82	45.970	ENSLOCG00000003124	rpusd4	88	45.970	Lepisosteus_oculatus
ENSORLG00015020034	rpusd4	82	49.394	ENSLAFG00000005211	RPUSD4	99	42.857	Loxodonta_africana
ENSORLG00015020034	rpusd4	82	49.249	ENSMFAG00000039513	RPUSD4	87	49.249	Macaca_fascicularis
ENSORLG00015020034	rpusd4	82	48.649	ENSMMUG00000007933	RPUSD4	87	48.649	Macaca_mulatta
ENSORLG00015020034	rpusd4	82	49.249	ENSMNEG00000027414	RPUSD4	87	49.249	Macaca_nemestrina
ENSORLG00015020034	rpusd4	82	49.550	ENSMLEG00000042461	RPUSD4	87	49.550	Mandrillus_leucophaeus
ENSORLG00015020034	rpusd4	90	67.769	ENSMAMG00000023839	rpusd4	94	67.769	Mastacembelus_armatus
ENSORLG00015020034	rpusd4	89	67.232	ENSMZEG00005011999	rpusd4	91	67.232	Maylandia_zebra
ENSORLG00015020034	rpusd4	70	49.825	ENSMGAG00000000840	RPUSD4	88	50.000	Meleagris_gallopavo
ENSORLG00015020034	rpusd4	83	50.599	ENSMAUG00000010280	Rpusd4	87	50.599	Mesocricetus_auratus
ENSORLG00015020034	rpusd4	82	50.599	ENSMICG00000015979	RPUSD4	90	53.465	Microcebus_murinus
ENSORLG00015020034	rpusd4	81	48.923	ENSMOCG00000000661	Rpusd4	89	48.083	Microtus_ochrogaster
ENSORLG00015020034	rpusd4	79	70.662	ENSMMOG00000021731	rpusd4	93	70.662	Mola_mola
ENSORLG00015020034	rpusd4	70	51.957	ENSMODG00000004521	RPUSD4	71	51.957	Monodelphis_domestica
ENSORLG00015020034	rpusd4	76	71.711	ENSMALG00000005839	rpusd4	98	69.040	Monopterus_albus
ENSORLG00015020034	rpusd4	81	51.070	MGP_CAROLIEiJ_G0031954	Rpusd4	85	51.070	Mus_caroli
ENSORLG00015020034	rpusd4	83	50.296	ENSMUSG00000032044	Rpusd4	88	50.296	Mus_musculus
ENSORLG00015020034	rpusd4	88	49.296	MGP_PahariEiJ_G0014819	Rpusd4	90	49.296	Mus_pahari
ENSORLG00015020034	rpusd4	81	51.070	MGP_SPRETEiJ_G0033078	Rpusd4	92	49.435	Mus_spretus
ENSORLG00015020034	rpusd4	82	50.150	ENSMPUG00000006608	RPUSD4	87	50.150	Mustela_putorius_furo
ENSORLG00015020034	rpusd4	75	53.156	ENSMLUG00000017328	-	78	53.156	Myotis_lucifugus
ENSORLG00015020034	rpusd4	63	51.373	ENSMLUG00000029348	-	98	51.373	Myotis_lucifugus
ENSORLG00015020034	rpusd4	86	50.000	ENSNGAG00000020847	Rpusd4	93	50.000	Nannospalax_galili
ENSORLG00015020034	rpusd4	83	68.769	ENSNBRG00000005207	rpusd4	96	68.769	Neolamprologus_brichardi
ENSORLG00015020034	rpusd4	83	48.961	ENSNLEG00000007465	RPUSD4	88	48.961	Nomascus_leucogenys
ENSORLG00015020034	rpusd4	76	52.459	ENSMEUG00000004370	RPUSD4	81	52.459	Notamacropus_eugenii
ENSORLG00015020034	rpusd4	82	50.301	ENSODEG00000004577	RPUSD4	93	47.922	Octodon_degus
ENSORLG00015020034	rpusd4	89	67.797	ENSONIG00000018879	rpusd4	90	69.880	Oreochromis_niloticus
ENSORLG00015020034	rpusd4	73	48.148	ENSOANG00000007247	RPUSD4	93	48.148	Ornithorhynchus_anatinus
ENSORLG00015020034	rpusd4	83	50.599	ENSOCUG00000017039	RPUSD4	88	50.599	Oryctolagus_cuniculus
ENSORLG00015020034	rpusd4	95	97.090	ENSORLG00000002750	rpusd4	98	95.733	Oryzias_latipes
ENSORLG00015020034	rpusd4	100	96.992	ENSORLG00020002044	rpusd4	100	96.992	Oryzias_latipes_hni
ENSORLG00015020034	rpusd4	100	79.950	ENSOMEG00000004861	rpusd4	100	79.208	Oryzias_melastigma
ENSORLG00015020034	rpusd4	76	52.787	ENSOGAG00000008922	RPUSD4	79	52.787	Otolemur_garnettii
ENSORLG00015020034	rpusd4	81	49.538	ENSOARG00000012238	RPUSD4	87	48.538	Ovis_aries
ENSORLG00015020034	rpusd4	82	49.550	ENSPPAG00000042883	RPUSD4	82	49.112	Pan_paniscus
ENSORLG00015020034	rpusd4	82	49.850	ENSPPRG00000003081	RPUSD4	87	49.850	Panthera_pardus
ENSORLG00015020034	rpusd4	82	49.850	ENSPTIG00000012059	RPUSD4	85	52.649	Panthera_tigris_altaica
ENSORLG00015020034	rpusd4	82	49.699	ENSPTRG00000004454	RPUSD4	88	49.258	Pan_troglodytes
ENSORLG00015020034	rpusd4	82	49.249	ENSPANG00000015040	RPUSD4	87	49.249	Papio_anubis
ENSORLG00015020034	rpusd4	86	54.441	ENSPKIG00000023986	rpusd4	89	54.441	Paramormyrops_kingsleyae
ENSORLG00015020034	rpusd4	73	53.401	ENSPSIG00000014268	RPUSD4	92	53.401	Pelodiscus_sinensis
ENSORLG00015020034	rpusd4	83	63.554	ENSPMGG00000002806	rpusd4	92	62.121	Periophthalmus_magnuspinnatus
ENSORLG00015020034	rpusd4	81	43.077	ENSPEMG00000000278	Rpusd4	84	43.077	Peromyscus_maniculatus_bairdii
ENSORLG00015020034	rpusd4	75	39.818	ENSPMAG00000008183	rpusd4	95	39.818	Petromyzon_marinus
ENSORLG00015020034	rpusd4	74	52.703	ENSPCIG00000010212	RPUSD4	80	52.703	Phascolarctos_cinereus
ENSORLG00015020034	rpusd4	90	65.489	ENSPFOG00000019030	rpusd4	97	65.489	Poecilia_formosa
ENSORLG00015020034	rpusd4	90	66.393	ENSPLAG00000016848	rpusd4	93	66.393	Poecilia_latipinna
ENSORLG00015020034	rpusd4	90	65.027	ENSPMEG00000017534	rpusd4	93	65.027	Poecilia_mexicana
ENSORLG00015020034	rpusd4	85	66.185	ENSPREG00000005689	rpusd4	89	66.185	Poecilia_reticulata
ENSORLG00015020034	rpusd4	83	48.368	ENSPPYG00000004043	RPUSD4	88	48.368	Pongo_abelii
ENSORLG00015020034	rpusd4	68	51.913	ENSPCAG00000000753	RPUSD4	72	51.913	Procavia_capensis
ENSORLG00015020034	rpusd4	85	46.784	ENSPCOG00000020694	RPUSD4	89	46.784	Propithecus_coquereli
ENSORLG00015020034	rpusd4	81	50.154	ENSPVAG00000000988	RPUSD4	86	50.154	Pteropus_vampyrus
ENSORLG00015020034	rpusd4	89	66.949	ENSPNYG00000009652	rpusd4	91	66.949	Pundamilia_nyererei
ENSORLG00015020034	rpusd4	90	56.354	ENSPNAG00000012264	rpusd4	93	56.354	Pygocentrus_nattereri
ENSORLG00015020034	rpusd4	92	47.861	ENSRNOG00000011567	Rpusd4	92	48.501	Rattus_norvegicus
ENSORLG00015020034	rpusd4	79	50.156	ENSRBIG00000034842	RPUSD4	87	48.649	Rhinopithecus_bieti
ENSORLG00015020034	rpusd4	79	50.156	ENSRROG00000039753	RPUSD4	87	48.649	Rhinopithecus_roxellana
ENSORLG00015020034	rpusd4	83	48.225	ENSSBOG00000030413	RPUSD4	89	48.225	Saimiri_boliviensis_boliviensis
ENSORLG00015020034	rpusd4	74	50.676	ENSSHAG00000008304	RPUSD4	96	50.676	Sarcophilus_harrisii
ENSORLG00015020034	rpusd4	74	59.322	ENSSFOG00015006203	rpusd4	89	56.667	Scleropages_formosus
ENSORLG00015020034	rpusd4	90	67.688	ENSSMAG00000020978	rpusd4	92	67.688	Scophthalmus_maximus
ENSORLG00015020034	rpusd4	91	66.935	ENSSDUG00000013399	rpusd4	92	68.908	Seriola_dumerili
ENSORLG00015020034	rpusd4	91	66.038	ENSSLDG00000023507	rpusd4	92	67.978	Seriola_lalandi_dorsalis
ENSORLG00015020034	rpusd4	74	54.054	ENSSPUG00000001401	RPUSD4	93	50.437	Sphenodon_punctatus
ENSORLG00015020034	rpusd4	97	65.394	ENSSPAG00000012163	rpusd4	93	69.252	Stegastes_partitus
ENSORLG00015020034	rpusd4	83	48.214	ENSSSCG00000015233	RPUSD4	88	48.214	Sus_scrofa
ENSORLG00015020034	rpusd4	72	51.034	ENSTGUG00000000773	RPUSD4	96	51.034	Taeniopygia_guttata
ENSORLG00015020034	rpusd4	89	62.570	ENSTRUG00000012283	rpusd4	91	62.570	Takifugu_rubripes
ENSORLG00015020034	rpusd4	92	61.475	ENSTNIG00000014676	rpusd4	91	62.570	Tetraodon_nigroviridis
ENSORLG00015020034	rpusd4	83	50.148	ENSTTRG00000001555	RPUSD4	90	48.725	Tursiops_truncatus
ENSORLG00015020034	rpusd4	92	47.849	ENSUMAG00000002219	RPUSD4	86	50.610	Ursus_maritimus
ENSORLG00015020034	rpusd4	57	46.288	ENSVPAG00000001066	RPUSD4	85	46.288	Vicugna_pacos
ENSORLG00015020034	rpusd4	75	53.311	ENSVVUG00000020101	RPUSD4	87	50.751	Vulpes_vulpes
ENSORLG00015020034	rpusd4	90	66.485	ENSXCOG00000004676	rpusd4	94	65.730	Xiphophorus_couchianus
ENSORLG00015020034	rpusd4	90	66.485	ENSXMAG00000023351	rpusd4	93	66.485	Xiphophorus_maculatus