EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015020171 (Gene tree)
Gene ID: -
Gene Symbol: slirp
Alias: -
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 1136 bases
Position: chr22:3061414-3062549
Accession: ZDB-GENE-030729-30
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015019077	RRM_1	PF00076.22	2.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015035426	-	306	-	ENSORLP00015019077	101 (aa)	-	-

Gene Model

Click here to download ENSORLG00015020171's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015020171's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015020171	slirp	85	34.848	ENSORLG00015002382	hnrnpd	56	34.848
ENSORLG00015020171	slirp	82	30.667	ENSORLG00015022877	hnrnpaba	50	30.120

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015020171	slirp	84	54.118	ENSG00000119705	SLIRP	92	57.143	Homo_sapiens
ENSORLG00015020171	slirp	98	81.818	ENSAPOG00000001298	slirp	99	81.818	Acanthochromis_polyacanthus
ENSORLG00015020171	slirp	81	49.451	ENSAMEG00000003975	SLIRP	100	49.451	Ailuropoda_melanoleuca
ENSORLG00015020171	slirp	100	79.208	ENSACIG00000023083	slirp	100	79.208	Amphilophus_citrinellus
ENSORLG00015020171	slirp	97	81.633	ENSAOCG00000006342	slirp	99	81.633	Amphiprion_ocellaris
ENSORLG00015020171	slirp	97	81.633	ENSAPEG00000015917	slirp	99	81.633	Amphiprion_percula
ENSORLG00015020171	slirp	96	81.443	ENSAPEG00000015719	-	99	81.443	Amphiprion_percula
ENSORLG00015020171	slirp	98	75.758	ENSATEG00000013525	slirp	99	75.758	Anabas_testudineus
ENSORLG00015020171	slirp	96	61.856	ENSAMXG00000018693	slirp	97	61.856	Astyanax_mexicanus
ENSORLG00015020171	slirp	73	59.459	ENSCJAG00000016946	SLIRP	72	58.209	Callithrix_jacchus
ENSORLG00015020171	slirp	99	46.847	ENSCAFG00020015876	-	100	46.847	Canis_lupus_dingo
ENSORLG00015020171	slirp	87	52.273	ENSCCAG00000030130	SLIRP	81	52.273	Cebus_capucinus
ENSORLG00015020171	slirp	87	49.485	ENSCATG00000036327	SLIRP	95	50.000	Cercocebus_atys
ENSORLG00015020171	slirp	88	53.933	ENSCSAG00000011736	SLIRP	87	49.474	Chlorocebus_sabaeus
ENSORLG00015020171	slirp	77	64.103	ENSCPBG00000026327	SLIRP	79	64.103	Chrysemys_picta_bellii
ENSORLG00015020171	slirp	66	61.194	ENSCANG00000032892	SLIRP	90	52.273	Colobus_angolensis_palliatus
ENSORLG00015020171	slirp	99	45.098	ENSCGRG00001024068	Slirp	92	45.098	Cricetulus_griseus_chok1gshd
ENSORLG00015020171	slirp	99	45.098	ENSCGRG00000017440	Slirp	92	45.098	Cricetulus_griseus_crigri
ENSORLG00015020171	slirp	82	61.446	ENSCSEG00000015766	slirp	85	61.446	Cynoglossus_semilaevis
ENSORLG00015020171	slirp	88	73.034	ENSCVAG00000012504	slirp	85	73.034	Cyprinodon_variegatus
ENSORLG00015020171	slirp	94	76.842	ENSDARG00000097753	slirp	96	75.758	Danio_rerio
ENSORLG00015020171	slirp	86	47.126	ENSDNOG00000007721	SLIRP	97	42.593	Dasypus_novemcinctus
ENSORLG00015020171	slirp	87	48.315	ENSDORG00000012379	Slirp	80	48.315	Dipodomys_ordii
ENSORLG00015020171	slirp	87	50.000	ENSETEG00000010345	SLIRP	100	44.954	Echinops_telfairi
ENSORLG00015020171	slirp	100	49.091	ENSEASG00005020193	SLIRP	99	49.091	Equus_asinus_asinus
ENSORLG00015020171	slirp	99	45.545	ENSEEUG00000007257	SLIRP	100	45.545	Erinaceus_europaeus
ENSORLG00015020171	slirp	95	77.083	ENSELUG00000016800	slirp	95	77.083	Esox_lucius
ENSORLG00015020171	slirp	78	52.273	ENSFCAG00000036326	SLIRP	90	52.273	Felis_catus
ENSORLG00015020171	slirp	77	55.128	ENSFALG00000012583	SLIRP	84	52.809	Ficedula_albicollis
ENSORLG00015020171	slirp	84	54.023	ENSFDAG00000008347	SLIRP	77	54.023	Fukomys_damarensis
ENSORLG00015020171	slirp	79	78.750	ENSFHEG00000004709	slirp	87	78.750	Fundulus_heteroclitus
ENSORLG00015020171	slirp	98	74.747	ENSGMOG00000016948	slirp	95	74.747	Gadus_morhua
ENSORLG00015020171	slirp	91	53.261	ENSGALG00000031238	SLIRP	89	53.261	Gallus_gallus
ENSORLG00015020171	slirp	98	76.768	ENSGAFG00000010998	slirp	99	76.768	Gambusia_affinis
ENSORLG00015020171	slirp	80	80.247	ENSGACG00000020137	slirp	94	80.247	Gasterosteus_aculeatus
ENSORLG00015020171	slirp	95	60.606	ENSGAGG00000009953	SLIRP	68	60.606	Gopherus_agassizii
ENSORLG00015020171	slirp	84	54.118	ENSGGOG00000011059	-	95	50.000	Gorilla_gorilla
ENSORLG00015020171	slirp	100	44.545	ENSHGLG00000018491	SLIRP	99	44.545	Heterocephalus_glaber_female
ENSORLG00015020171	slirp	100	44.545	ENSHGLG00100014153	SLIRP	99	44.545	Heterocephalus_glaber_male
ENSORLG00015020171	slirp	94	78.947	ENSHCOG00000006795	slirp	96	78.947	Hippocampus_comes
ENSORLG00015020171	slirp	96	75.258	ENSIPUG00000010214	SLIRP	97	75.258	Ictalurus_punctatus
ENSORLG00015020171	slirp	88	51.685	ENSSTOG00000034316	SLIRP	99	46.364	Ictidomys_tridecemlineatus
ENSORLG00015020171	slirp	98	67.677	ENSKMAG00000002038	slirp	95	67.677	Kryptolebias_marmoratus
ENSORLG00015020171	slirp	98	69.697	ENSLBEG00000007564	slirp	99	69.697	Labrus_bergylta
ENSORLG00015020171	slirp	95	70.833	ENSLACG00000013434	SLIRP	92	70.833	Latimeria_chalumnae
ENSORLG00015020171	slirp	73	56.757	ENSMFAG00000042960	SLIRP	95	50.000	Macaca_fascicularis
ENSORLG00015020171	slirp	82	53.012	ENSMMUG00000029256	SLIRP	95	50.000	Macaca_mulatta
ENSORLG00015020171	slirp	73	56.757	ENSMNEG00000028921	SLIRP	95	50.000	Macaca_nemestrina
ENSORLG00015020171	slirp	98	46.296	ENSMLEG00000043644	SLIRP	95	46.296	Mandrillus_leucophaeus
ENSORLG00015020171	slirp	97	86.735	ENSMZEG00005004617	slirp	99	86.735	Maylandia_zebra
ENSORLG00015020171	slirp	100	43.636	ENSMAUG00000003857	Slirp	99	43.636	Mesocricetus_auratus
ENSORLG00015020171	slirp	100	47.273	ENSMICG00000012080	SLIRP	99	47.273	Microcebus_murinus
ENSORLG00015020171	slirp	98	44.444	ENSMOCG00000016019	Slirp	96	44.444	Microtus_ochrogaster
ENSORLG00015020171	slirp	98	89.899	ENSMMOG00000018268	slirp	99	89.899	Mola_mola
ENSORLG00015020171	slirp	69	54.286	ENSMODG00000005207	-	99	54.286	Monodelphis_domestica
ENSORLG00015020171	slirp	98	71.717	ENSMALG00000012581	slirp	99	71.717	Monopterus_albus
ENSORLG00015020171	slirp	99	45.455	MGP_CAROLIEiJ_G0017995	Slirp	99	45.794	Mus_caroli
ENSORLG00015020171	slirp	99	45.455	ENSMUSG00000021040	Slirp	98	45.455	Mus_musculus
ENSORLG00015020171	slirp	99	45.455	MGP_SPRETEiJ_G0018840	Slirp	98	45.455	Mus_spretus
ENSORLG00015020171	slirp	100	52.475	ENSMLUG00000029544	-	75	58.140	Myotis_lucifugus
ENSORLG00015020171	slirp	87	54.545	ENSMLUG00000024998	-	89	52.475	Myotis_lucifugus
ENSORLG00015020171	slirp	85	48.352	ENSNGAG00000016363	Slirp	88	48.352	Nannospalax_galili
ENSORLG00015020171	slirp	100	45.455	ENSNLEG00000032459	-	99	45.455	Nomascus_leucogenys
ENSORLG00015020171	slirp	89	47.778	ENSNLEG00000027238	-	84	47.778	Nomascus_leucogenys
ENSORLG00015020171	slirp	99	45.045	ENSODEG00000012580	SLIRP	99	47.253	Octodon_degus
ENSORLG00015020171	slirp	97	85.714	ENSONIG00000011692	slirp	99	85.714	Oreochromis_niloticus
ENSORLG00015020171	slirp	74	61.333	ENSOANG00000022366	SLIRP	68	61.333	Ornithorhynchus_anatinus
ENSORLG00015020171	slirp	98	97.980	ENSORLG00000010761	slirp	77	97.980	Oryzias_latipes
ENSORLG00015020171	slirp	98	96.970	ENSORLG00020022188	slirp	99	96.970	Oryzias_latipes_hni
ENSORLG00015020171	slirp	98	91.919	ENSOMEG00000019321	slirp	99	91.919	Oryzias_melastigma
ENSORLG00015020171	slirp	84	54.118	ENSPPAG00000040710	-	95	50.000	Pan_paniscus
ENSORLG00015020171	slirp	78	55.696	ENSPPRG00000014350	SLIRP	81	55.696	Panthera_pardus
ENSORLG00015020171	slirp	78	55.696	ENSPTIG00000014196	SLIRP	81	55.696	Panthera_tigris_altaica
ENSORLG00015020171	slirp	84	54.118	ENSPTRG00000030691	SLIRP	99	48.113	Pan_troglodytes
ENSORLG00015020171	slirp	85	50.526	ENSPANG00000026323	SLIRP	95	51.136	Papio_anubis
ENSORLG00015020171	slirp	65	71.212	ENSPKIG00000008831	slirp	65	71.212	Paramormyrops_kingsleyae
ENSORLG00015020171	slirp	78	77.215	ENSPMGG00000010541	slirp	91	77.215	Periophthalmus_magnuspinnatus
ENSORLG00015020171	slirp	70	53.521	ENSPEMG00000013234	Slirp	89	43.956	Peromyscus_maniculatus_bairdii
ENSORLG00015020171	slirp	78	55.696	ENSPMAG00000009355	slirp	88	55.696	Petromyzon_marinus
ENSORLG00015020171	slirp	78	49.367	ENSPCIG00000026842	-	85	49.367	Phascolarctos_cinereus
ENSORLG00015020171	slirp	97	73.469	ENSPFOG00000006758	slirp	98	73.469	Poecilia_formosa
ENSORLG00015020171	slirp	97	74.490	ENSPLAG00000011140	slirp	98	74.490	Poecilia_latipinna
ENSORLG00015020171	slirp	97	73.469	ENSPMEG00000019535	slirp	98	73.469	Poecilia_mexicana
ENSORLG00015020171	slirp	97	73.469	ENSPREG00000011673	slirp	98	73.469	Poecilia_reticulata
ENSORLG00015020171	slirp	73	56.757	ENSPPYG00000006030	SLIRP	87	49.474	Pongo_abelii
ENSORLG00015020171	slirp	75	57.895	ENSPCOG00000015159	SLIRP	66	57.895	Propithecus_coquereli
ENSORLG00015020171	slirp	96	77.320	ENSPNAG00000008633	slirp	98	77.320	Pygocentrus_nattereri
ENSORLG00015020171	slirp	87	54.545	ENSRBIG00000032222	-	100	48.624	Rhinopithecus_bieti
ENSORLG00015020171	slirp	84	50.588	ENSRBIG00000035817	-	99	45.283	Rhinopithecus_bieti
ENSORLG00015020171	slirp	66	58.209	ENSRBIG00000032998	-	81	50.000	Rhinopithecus_bieti
ENSORLG00015020171	slirp	64	60.000	ENSRBIG00000031396	-	86	51.163	Rhinopithecus_bieti
ENSORLG00015020171	slirp	64	61.538	ENSRROG00000035604	-	86	52.326	Rhinopithecus_roxellana
ENSORLG00015020171	slirp	70	60.563	ENSRROG00000041312	-	91	52.174	Rhinopithecus_roxellana
ENSORLG00015020171	slirp	66	59.701	ENSRROG00000017133	-	92	51.136	Rhinopithecus_roxellana
ENSORLG00015020171	slirp	87	54.545	ENSRROG00000036656	-	100	48.624	Rhinopithecus_roxellana
ENSORLG00015020171	slirp	72	56.164	ENSSBOG00000020014	SLIRP	72	59.701	Saimiri_boliviensis_boliviensis
ENSORLG00015020171	slirp	96	62.887	ENSSFOG00015011165	slirp	97	62.887	Scleropages_formosus
ENSORLG00015020171	slirp	98	54.455	ENSSMAG00000012930	slirp	99	54.455	Scophthalmus_maximus
ENSORLG00015020171	slirp	98	80.808	ENSSDUG00000021883	slirp	65	80.808	Seriola_dumerili
ENSORLG00015020171	slirp	98	80.808	ENSSLDG00000023136	slirp	90	80.808	Seriola_lalandi_dorsalis
ENSORLG00015020171	slirp	82	62.353	ENSSPUG00000009346	SLIRP	87	62.353	Sphenodon_punctatus
ENSORLG00015020171	slirp	98	75.758	ENSSPAG00000013477	slirp	99	75.758	Stegastes_partitus
ENSORLG00015020171	slirp	100	48.182	ENSSSCG00000028167	SLIRP	99	48.182	Sus_scrofa
ENSORLG00015020171	slirp	77	57.692	ENSTGUG00000012337	SLIRP	91	50.000	Taeniopygia_guttata
ENSORLG00015020171	slirp	96	70.408	ENSTRUG00000020127	slirp	97	70.408	Takifugu_rubripes
ENSORLG00015020171	slirp	99	50.000	ENSUAMG00000022445	SLIRP	100	50.000	Ursus_americanus
ENSORLG00015020171	slirp	100	48.182	ENSUMAG00000007166	SLIRP	99	48.182	Ursus_maritimus
ENSORLG00015020171	slirp	96	47.664	ENSVPAG00000001781	SLIRP	99	47.664	Vicugna_pacos
ENSORLG00015020171	slirp	87	53.846	ENSVVUG00000004436	SLIRP	100	48.214	Vulpes_vulpes
ENSORLG00015020171	slirp	79	70.000	ENSXETG00000030343	SLIRP	90	70.000	Xenopus_tropicalis
ENSORLG00015020171	slirp	98	76.768	ENSXCOG00000009422	slirp	99	76.768	Xiphophorus_couchianus
ENSORLG00015020171	slirp	98	76.768	ENSXMAG00000015655	slirp	99	76.768	Xiphophorus_maculatus