EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015020234 (Gene tree)
Gene ID: -
Gene Symbol: rbm46
Alias: -
Full Name: RNA binding motif protein 46
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 30217 bases
Position: chr18:1976464-2006680
Accession: ZDB-GENE-061013-298
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015034324	DND1_DSRM	PF14709.7	2.2e-18	1	1
ENSORLP00015019130	DND1_DSRM	PF14709.7	2.4e-18	1	1
ENSORLP00015019149	DND1_DSRM	PF14709.7	3e-18	1	1
ENSORLP00015034324	RRM_1	PF00076.22	1.3e-36	1	3
ENSORLP00015034324	RRM_1	PF00076.22	1.3e-36	2	3
ENSORLP00015034324	RRM_1	PF00076.22	1.3e-36	3	3
ENSORLP00015019130	RRM_1	PF00076.22	1.6e-36	1	3
ENSORLP00015019130	RRM_1	PF00076.22	1.6e-36	2	3
ENSORLP00015019130	RRM_1	PF00076.22	1.6e-36	3	3
ENSORLP00015019149	RRM_1	PF00076.22	2.7e-36	1	3
ENSORLP00015019149	RRM_1	PF00076.22	2.7e-36	2	3
ENSORLP00015019149	RRM_1	PF00076.22	2.7e-36	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015028037	-	1407	-	ENSORLP00015034324	468 (aa)	-	-
ENSORLT00015035458	-	5216	-	ENSORLP00015019149	555 (aa)	-	-
ENSORLT00015028000	-	2185	-	ENSORLP00015019130	496 (aa)	-	-

Gene Model

Click here to download ENSORLG00015020234's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015020234's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015020234	rbm46	93	61.076	ENSORLG00015018569	a1cf	65	63.176
ENSORLG00015020234	rbm46	69	36.634	ENSORLG00015011511	tia1	84	36.634
ENSORLG00015020234	rbm46	57	35.644	ENSORLG00015020886	-	70	35.644
ENSORLG00015020234	rbm46	63	51.852	ENSORLG00015011114	syncripl	54	51.361
ENSORLG00015020234	rbm46	63	66.330	ENSORLG00015000066	rbm47	55	65.320
ENSORLG00015020234	rbm46	63	50.842	ENSORLG00015017032	syncrip	52	50.340

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015020234	rbm46	95	63.291	ENSG00000151962	RBM46	98	74.615	Homo_sapiens
ENSORLG00015020234	rbm46	92	73.246	ENSAPOG00000009209	rbm46	95	68.107	Acanthochromis_polyacanthus
ENSORLG00015020234	rbm46	94	62.526	ENSAMEG00000013290	RBM46	88	62.185	Ailuropoda_melanoleuca
ENSORLG00015020234	rbm46	92	73.543	ENSACIG00000014500	rbm46	93	72.149	Amphilophus_citrinellus
ENSORLG00015020234	rbm46	91	74.165	ENSAOCG00000001892	-	95	70.513	Amphiprion_ocellaris
ENSORLG00015020234	rbm46	88	76.056	ENSAPEG00000017762	rbm46	97	76.056	Amphiprion_percula
ENSORLG00015020234	rbm46	91	76.620	ENSATEG00000010775	rbm46	87	76.620	Anabas_testudineus
ENSORLG00015020234	rbm46	92	63.557	ENSAPLG00000005116	RBM46	97	64.159	Anas_platyrhynchos
ENSORLG00015020234	rbm46	91	65.556	ENSACAG00000015599	RBM46	87	65.556	Anolis_carolinensis
ENSORLG00015020234	rbm46	95	63.655	ENSANAG00000029193	RBM46	99	62.947	Aotus_nancymaae
ENSORLG00015020234	rbm46	96	74.428	ENSACLG00000016153	rbm46	85	74.012	Astatotilapia_calliptera
ENSORLG00015020234	rbm46	92	62.687	ENSAMXG00000020892	-	88	62.851	Astyanax_mexicanus
ENSORLG00015020234	rbm46	91	66.814	ENSAMXG00000009397	rbm46	97	69.087	Astyanax_mexicanus
ENSORLG00015020234	rbm46	95	62.737	ENSBTAG00000001696	RBM46	97	62.128	Bos_taurus
ENSORLG00015020234	rbm46	95	63.502	ENSCJAG00000001768	RBM46	99	63.080	Callithrix_jacchus
ENSORLG00015020234	rbm46	94	62.869	ENSCAFG00000008473	RBM46	96	62.368	Canis_familiaris
ENSORLG00015020234	rbm46	96	61.983	ENSCAFG00020002468	RBM46	94	62.851	Canis_lupus_dingo
ENSORLG00015020234	rbm46	97	61.443	ENSCHIG00000000502	RBM46	97	62.208	Capra_hircus
ENSORLG00015020234	rbm46	97	61.523	ENSTSYG00000010435	RBM46	98	63.181	Carlito_syrichta
ENSORLG00015020234	rbm46	97	60.619	ENSCAPG00000011928	-	97	61.571	Cavia_aperea
ENSORLG00015020234	rbm46	77	64.211	ENSCAPG00000011841	-	83	74.038	Cavia_aperea
ENSORLG00015020234	rbm46	97	61.523	ENSCPOG00000020396	-	98	60.569	Cavia_porcellus
ENSORLG00015020234	rbm46	94	60.254	ENSCPOG00000019272	-	86	60.430	Cavia_porcellus
ENSORLG00015020234	rbm46	97	60.619	ENSCPOG00000010284	-	98	62.826	Cavia_porcellus
ENSORLG00015020234	rbm46	94	52.632	ENSCCAG00000001323	-	97	52.000	Cebus_capucinus
ENSORLG00015020234	rbm46	95	63.502	ENSCCAG00000027619	-	99	63.080	Cebus_capucinus
ENSORLG00015020234	rbm46	95	63.080	ENSCATG00000040148	RBM46	99	62.658	Cercocebus_atys
ENSORLG00015020234	rbm46	94	62.288	ENSCLAG00000011886	-	90	61.945	Chinchilla_lanigera
ENSORLG00015020234	rbm46	95	62.105	ENSCLAG00000005846	-	98	62.527	Chinchilla_lanigera
ENSORLG00015020234	rbm46	94	63.214	ENSCSAG00000003263	RBM46	88	62.683	Chlorocebus_sabaeus
ENSORLG00015020234	rbm46	94	62.025	ENSCHOG00000003429	RBM46	86	63.319	Choloepus_hoffmanni
ENSORLG00015020234	rbm46	90	61.419	ENSCPBG00000009314	RBM46	97	61.486	Chrysemys_picta_bellii
ENSORLG00015020234	rbm46	95	63.291	ENSCANG00000039065	RBM46	99	62.869	Colobus_angolensis_palliatus
ENSORLG00015020234	rbm46	95	63.158	ENSCGRG00001016714	Rbm46	99	62.579	Cricetulus_griseus_chok1gshd
ENSORLG00015020234	rbm46	95	63.158	ENSCGRG00000011738	Rbm46	99	62.579	Cricetulus_griseus_crigri
ENSORLG00015020234	rbm46	92	61.623	ENSCSEG00000005530	rbm46	97	63.182	Cynoglossus_semilaevis
ENSORLG00015020234	rbm46	89	71.918	ENSCVAG00000021013	rbm46	94	71.918	Cyprinodon_variegatus
ENSORLG00015020234	rbm46	93	66.739	ENSDARG00000079452	rbm46	88	67.763	Danio_rerio
ENSORLG00015020234	rbm46	94	62.316	ENSDNOG00000016195	RBM46	88	61.975	Dasypus_novemcinctus
ENSORLG00015020234	rbm46	95	62.815	ENSDORG00000006405	Rbm46	98	63.399	Dipodomys_ordii
ENSORLG00015020234	rbm46	92	62.553	ENSETEG00000014902	RBM46	86	63.557	Echinops_telfairi
ENSORLG00015020234	rbm46	92	63.793	ENSEASG00005015821	RBM46	88	62.395	Equus_asinus_asinus
ENSORLG00015020234	rbm46	92	64.147	ENSECAG00000007649	RBM46	96	62.579	Equus_caballus
ENSORLG00015020234	rbm46	94	60.970	ENSEEUG00000011824	RBM46	88	60.294	Erinaceus_europaeus
ENSORLG00015020234	rbm46	77	68.490	ENSELUG00000008166	rbm46	97	68.733	Esox_lucius
ENSORLG00015020234	rbm46	97	61.983	ENSFCAG00000029812	RBM46	99	62.368	Felis_catus
ENSORLG00015020234	rbm46	91	61.926	ENSFALG00000013157	RBM46	94	58.607	Ficedula_albicollis
ENSORLG00015020234	rbm46	94	60.504	ENSFDAG00000006445	-	92	60.377	Fukomys_damarensis
ENSORLG00015020234	rbm46	92	62.419	ENSFDAG00000019281	-	88	60.504	Fukomys_damarensis
ENSORLG00015020234	rbm46	77	73.458	ENSFHEG00000013257	rbm46	87	73.458	Fundulus_heteroclitus
ENSORLG00015020234	rbm46	95	57.053	ENSGALG00000009278	RBM46	98	58.495	Gallus_gallus
ENSORLG00015020234	rbm46	80	78.632	ENSGAFG00000020245	rbm46	74	86.598	Gambusia_affinis
ENSORLG00015020234	rbm46	94	61.522	ENSGAGG00000002019	RBM46	89	61.229	Gopherus_agassizii
ENSORLG00015020234	rbm46	95	63.291	ENSGGOG00000001876	RBM46	99	62.869	Gorilla_gorilla
ENSORLG00015020234	rbm46	89	75.446	ENSHBUG00000009609	rbm46	97	75.000	Haplochromis_burtoni
ENSORLG00015020234	rbm46	92	54.525	ENSHGLG00000002940	-	88	54.525	Heterocephalus_glaber_female
ENSORLG00015020234	rbm46	89	55.227	ENSHGLG00000010742	-	84	56.075	Heterocephalus_glaber_female
ENSORLG00015020234	rbm46	91	61.778	ENSHGLG00000002463	-	97	64.387	Heterocephalus_glaber_female
ENSORLG00015020234	rbm46	97	60.537	ENSHGLG00100012752	-	98	63.399	Heterocephalus_glaber_male
ENSORLG00015020234	rbm46	89	55.227	ENSHGLG00100004977	-	84	56.075	Heterocephalus_glaber_male
ENSORLG00015020234	rbm46	94	48.941	ENSHGLG00100018987	-	87	50.000	Heterocephalus_glaber_male
ENSORLG00015020234	rbm46	92	53.407	ENSHCOG00000012998	rbm46	92	52.258	Hippocampus_comes
ENSORLG00015020234	rbm46	96	62.651	ENSIPUG00000024038	rbm46	99	62.602	Ictalurus_punctatus
ENSORLG00015020234	rbm46	92	64.009	ENSSTOG00000007918	RBM46	98	63.399	Ictidomys_tridecemlineatus
ENSORLG00015020234	rbm46	92	64.655	ENSJJAG00000003902	Rbm46	97	63.877	Jaculus_jaculus
ENSORLG00015020234	rbm46	95	71.550	ENSKMAG00000015127	rbm46	99	65.934	Kryptolebias_marmoratus
ENSORLG00015020234	rbm46	94	62.658	ENSLACG00000002062	RBM46	88	62.395	Latimeria_chalumnae
ENSORLG00015020234	rbm46	92	67.834	ENSLOCG00000008298	rbm46	95	68.000	Lepisosteus_oculatus
ENSORLG00015020234	rbm46	95	62.737	ENSLAFG00000015448	RBM46	98	63.181	Loxodonta_africana
ENSORLG00015020234	rbm46	95	63.291	ENSMFAG00000043485	RBM46	99	62.869	Macaca_fascicularis
ENSORLG00015020234	rbm46	94	63.214	ENSMMUG00000021147	RBM46	96	62.869	Macaca_mulatta
ENSORLG00015020234	rbm46	95	63.291	ENSMNEG00000002787	RBM46	99	62.869	Macaca_nemestrina
ENSORLG00015020234	rbm46	95	63.080	ENSMLEG00000029756	RBM46	99	62.658	Mandrillus_leucophaeus
ENSORLG00015020234	rbm46	92	73.187	ENSMAMG00000009093	rbm46	91	71.840	Mastacembelus_armatus
ENSORLG00015020234	rbm46	93	74.353	ENSMZEG00005027849	rbm46	95	74.330	Maylandia_zebra
ENSORLG00015020234	rbm46	95	56.173	ENSMGAG00000001457	RBM46	98	58.225	Meleagris_gallopavo
ENSORLG00015020234	rbm46	95	63.368	ENSMAUG00000009911	Rbm46	99	62.791	Mesocricetus_auratus
ENSORLG00015020234	rbm46	95	62.947	ENSMICG00000042747	RBM46	99	62.368	Microcebus_murinus
ENSORLG00015020234	rbm46	95	63.158	ENSMOCG00000001188	Rbm46	99	62.579	Microtus_ochrogaster
ENSORLG00015020234	rbm46	94	66.596	ENSMMOG00000011214	rbm46	90	66.173	Mola_mola
ENSORLG00015020234	rbm46	94	62.579	ENSMODG00000001302	RBM46	80	62.368	Monodelphis_domestica
ENSORLG00015020234	rbm46	90	69.556	ENSMALG00000006185	rbm46	97	67.804	Monopterus_albus
ENSORLG00015020234	rbm46	95	63.368	MGP_CAROLIEiJ_G0025101	Rbm46	99	62.791	Mus_caroli
ENSORLG00015020234	rbm46	97	62.346	ENSMUSG00000033882	Rbm46	99	63.002	Mus_musculus
ENSORLG00015020234	rbm46	95	62.947	MGP_PahariEiJ_G0026544	Rbm46	98	63.636	Mus_pahari
ENSORLG00015020234	rbm46	97	62.551	MGP_SPRETEiJ_G0026043	Rbm46	99	63.214	Mus_spretus
ENSORLG00015020234	rbm46	94	62.869	ENSMPUG00000005670	RBM46	96	62.368	Mustela_putorius_furo
ENSORLG00015020234	rbm46	94	62.526	ENSMLUG00000003221	RBM46	88	61.845	Myotis_lucifugus
ENSORLG00015020234	rbm46	95	63.368	ENSNGAG00000004231	Rbm46	99	62.791	Nannospalax_galili
ENSORLG00015020234	rbm46	90	77.962	ENSNBRG00000000273	rbm46	87	83.648	Neolamprologus_brichardi
ENSORLG00015020234	rbm46	95	63.080	ENSNLEG00000006184	RBM46	99	62.658	Nomascus_leucogenys
ENSORLG00015020234	rbm46	85	62.353	ENSMEUG00000013328	RBM46	99	61.722	Notamacropus_eugenii
ENSORLG00015020234	rbm46	57	75.465	ENSOPRG00000007136	RBM46	98	75.636	Ochotona_princeps
ENSORLG00015020234	rbm46	95	62.316	ENSODEG00000000735	-	98	63.261	Octodon_degus
ENSORLG00015020234	rbm46	91	64.176	ENSODEG00000018002	-	89	62.690	Octodon_degus
ENSORLG00015020234	rbm46	91	70.370	ENSONIG00000014096	rbm46	99	68.750	Oreochromis_niloticus
ENSORLG00015020234	rbm46	95	60.288	ENSOANG00000002141	RBM46	95	62.635	Ornithorhynchus_anatinus
ENSORLG00015020234	rbm46	94	62.737	ENSOCUG00000017859	RBM46	88	62.395	Oryctolagus_cuniculus
ENSORLG00015020234	rbm46	100	98.198	ENSORLG00000002429	rbm46	100	98.198	Oryzias_latipes
ENSORLG00015020234	rbm46	100	97.658	ENSORLG00020022154	rbm46	100	97.658	Oryzias_latipes_hni
ENSORLG00015020234	rbm46	91	87.333	ENSOMEG00000022580	rbm46	100	82.667	Oryzias_melastigma
ENSORLG00015020234	rbm46	94	62.869	ENSOGAG00000005647	RBM46	88	62.185	Otolemur_garnettii
ENSORLG00015020234	rbm46	97	61.934	ENSOARG00000016406	RBM46	97	62.340	Ovis_aries
ENSORLG00015020234	rbm46	95	63.291	ENSPPAG00000043236	RBM46	99	62.869	Pan_paniscus
ENSORLG00015020234	rbm46	97	61.237	ENSPPRG00000009416	RBM46	99	62.156	Panthera_pardus
ENSORLG00015020234	rbm46	97	61.237	ENSPTIG00000017449	RBM46	99	62.156	Panthera_tigris_altaica
ENSORLG00015020234	rbm46	95	63.291	ENSPTRG00000016538	RBM46	99	62.869	Pan_troglodytes
ENSORLG00015020234	rbm46	95	63.291	ENSPANG00000004186	RBM46	99	62.869	Papio_anubis
ENSORLG00015020234	rbm46	92	65.948	ENSPKIG00000015334	rbm46	79	65.996	Paramormyrops_kingsleyae
ENSORLG00015020234	rbm46	96	61.031	ENSPSIG00000006429	RBM46	98	61.331	Pelodiscus_sinensis
ENSORLG00015020234	rbm46	92	83.333	ENSPMGG00000019872	rbm46	95	83.333	Periophthalmus_magnuspinnatus
ENSORLG00015020234	rbm46	95	63.158	ENSPEMG00000013899	Rbm46	99	62.579	Peromyscus_maniculatus_bairdii
ENSORLG00015020234	rbm46	94	62.791	ENSPCIG00000029626	RBM46	96	62.579	Phascolarctos_cinereus
ENSORLG00015020234	rbm46	89	85.714	ENSPFOG00000001079	rbm46	77	85.714	Poecilia_formosa
ENSORLG00015020234	rbm46	97	74.538	ENSPLAG00000004541	rbm46	84	73.967	Poecilia_latipinna
ENSORLG00015020234	rbm46	97	74.538	ENSPMEG00000015724	rbm46	95	76.538	Poecilia_mexicana
ENSORLG00015020234	rbm46	97	74.538	ENSPREG00000014464	rbm46	99	73.799	Poecilia_reticulata
ENSORLG00015020234	rbm46	94	63.214	ENSPPYG00000015144	RBM46	88	62.683	Pongo_abelii
ENSORLG00015020234	rbm46	94	58.774	ENSPCAG00000003110	RBM46	88	59.034	Procavia_capensis
ENSORLG00015020234	rbm46	95	62.526	ENSPCOG00000024347	RBM46	99	61.945	Propithecus_coquereli
ENSORLG00015020234	rbm46	94	62.526	ENSPVAG00000008376	RBM46	88	62.185	Pteropus_vampyrus
ENSORLG00015020234	rbm46	92	68.094	ENSPNAG00000025312	rbm46	88	68.251	Pygocentrus_nattereri
ENSORLG00015020234	rbm46	94	63.291	ENSRNOG00000025823	Rbm46	88	62.605	Rattus_norvegicus
ENSORLG00015020234	rbm46	95	63.713	ENSRBIG00000032583	RBM46	99	63.291	Rhinopithecus_bieti
ENSORLG00015020234	rbm46	95	63.502	ENSRROG00000044288	RBM46	99	63.080	Rhinopithecus_roxellana
ENSORLG00015020234	rbm46	95	63.502	ENSSBOG00000033028	RBM46	99	63.080	Saimiri_boliviensis_boliviensis
ENSORLG00015020234	rbm46	94	62.579	ENSSHAG00000012596	RBM46	88	62.185	Sarcophilus_harrisii
ENSORLG00015020234	rbm46	91	64.758	ENSSFOG00015000087	rbm46	85	65.753	Scleropages_formosus
ENSORLG00015020234	rbm46	89	71.971	ENSSMAG00000017042	rbm46	93	71.734	Scophthalmus_maximus
ENSORLG00015020234	rbm46	94	72.318	ENSSDUG00000020645	rbm46	94	72.246	Seriola_dumerili
ENSORLG00015020234	rbm46	94	62.658	ENSSARG00000006520	RBM46	88	61.975	Sorex_araneus
ENSORLG00015020234	rbm46	94	61.603	ENSSPUG00000012525	-	87	61.653	Sphenodon_punctatus
ENSORLG00015020234	rbm46	95	63.291	ENSSPUG00000004773	-	97	63.734	Sphenodon_punctatus
ENSORLG00015020234	rbm46	94	73.744	ENSSPAG00000013697	rbm46	99	73.744	Stegastes_partitus
ENSORLG00015020234	rbm46	96	62.397	ENSSSCG00000008994	RBM46	96	62.156	Sus_scrofa
ENSORLG00015020234	rbm46	90	61.369	ENSTGUG00000005307	RBM46	98	60.349	Taeniopygia_guttata
ENSORLG00015020234	rbm46	98	65.979	ENSTRUG00000004237	rbm46	93	69.128	Takifugu_rubripes
ENSORLG00015020234	rbm46	94	66.385	ENSTNIG00000008714	rbm46	90	63.750	Tetraodon_nigroviridis
ENSORLG00015020234	rbm46	92	62.635	ENSTBEG00000013949	RBM46	86	62.745	Tupaia_belangeri
ENSORLG00015020234	rbm46	94	62.579	ENSTTRG00000001239	RBM46	88	62.395	Tursiops_truncatus
ENSORLG00015020234	rbm46	94	62.869	ENSUAMG00000026593	RBM46	96	62.368	Ursus_americanus
ENSORLG00015020234	rbm46	94	62.658	ENSUMAG00000016442	RBM46	96	62.156	Ursus_maritimus
ENSORLG00015020234	rbm46	95	62.947	ENSVVUG00000024957	RBM46	99	62.368	Vulpes_vulpes
ENSORLG00015020234	rbm46	64	63.192	ENSXETG00000032067	-	83	63.961	Xenopus_tropicalis
ENSORLG00015020234	rbm46	94	60.085	ENSXETG00000022412	-	91	57.260	Xenopus_tropicalis
ENSORLG00015020234	rbm46	94	44.118	ENSXETG00000032344	-	86	43.413	Xenopus_tropicalis
ENSORLG00015020234	rbm46	89	74.266	ENSXMAG00000008237	rbm46	90	74.434	Xiphophorus_maculatus