EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015020297 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-256m1.8
Alias: -
Full Name: si:ch211-256m1.8
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 15232 bases
Position: chr8:19737107-19752338
Accession: ZDB-GENE-131127-417
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015034366	tRNA-synt_2	PF00152.20	2.4e-29	1	1
ENSORLP00015034364	tRNA-synt_2	PF00152.20	2.9e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015035485	-	7088	-	ENSORLP00015034364	1573 (aa)	-	-
ENSORLT00015035488	-	6945	-	ENSORLP00015034366	1379 (aa)	-	-

Gene Model

Click here to download ENSORLG00015020297's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015020297's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015020297	si:ch211-256m1.8	100	75.459	ENSAPOG00000007012	si:ch211-256m1.8	100	75.459	Acanthochromis_polyacanthus
ENSORLG00015020297	si:ch211-256m1.8	100	75.490	ENSAOCG00000012258	si:ch211-256m1.8	100	75.490	Amphiprion_ocellaris
ENSORLG00015020297	si:ch211-256m1.8	100	75.553	ENSAPEG00000002724	si:ch211-256m1.8	100	75.553	Amphiprion_percula
ENSORLG00015020297	si:ch211-256m1.8	100	74.937	ENSATEG00000006278	si:ch211-256m1.8	100	74.937	Anabas_testudineus
ENSORLG00015020297	si:ch211-256m1.8	100	76.500	ENSACLG00000011503	si:ch211-256m1.8	100	76.500	Astatotilapia_calliptera
ENSORLG00015020297	si:ch211-256m1.8	100	65.354	ENSAMXG00000038245	si:ch211-256m1.8	100	65.138	Astyanax_mexicanus
ENSORLG00015020297	si:ch211-256m1.8	100	70.266	ENSCSEG00000006255	si:ch211-256m1.8	100	70.120	Cynoglossus_semilaevis
ENSORLG00015020297	si:ch211-256m1.8	100	75.427	ENSCVAG00000003376	si:ch211-256m1.8	100	75.427	Cyprinodon_variegatus
ENSORLG00015020297	si:ch211-256m1.8	100	65.014	ENSDARG00000055172	si:ch211-256m1.8	100	64.358	Danio_rerio
ENSORLG00015020297	si:ch211-256m1.8	100	68.710	ENSELUG00000010546	si:ch211-256m1.8	100	68.523	Esox_lucius
ENSORLG00015020297	si:ch211-256m1.8	100	74.018	ENSFHEG00000005847	si:ch211-256m1.8	100	74.018	Fundulus_heteroclitus
ENSORLG00015020297	si:ch211-256m1.8	100	75.807	ENSGAFG00000010269	si:ch211-256m1.8	100	75.807	Gambusia_affinis
ENSORLG00015020297	si:ch211-256m1.8	100	76.437	ENSHBUG00000014407	si:ch211-256m1.8	100	76.437	Haplochromis_burtoni
ENSORLG00015020297	si:ch211-256m1.8	100	70.274	ENSHCOG00000006884	si:ch211-256m1.8	100	70.436	Hippocampus_comes
ENSORLG00015020297	si:ch211-256m1.8	100	64.744	ENSIPUG00000022659	si:ch211-256m1.8	100	63.906	Ictalurus_punctatus
ENSORLG00015020297	si:ch211-256m1.8	100	77.112	ENSKMAG00000016377	si:ch211-256m1.8	100	77.074	Kryptolebias_marmoratus
ENSORLG00015020297	si:ch211-256m1.8	100	74.605	ENSLBEG00000010639	si:ch211-256m1.8	100	74.605	Labrus_bergylta
ENSORLG00015020297	si:ch211-256m1.8	99	61.370	ENSLOCG00000011127	si:ch211-256m1.8	100	59.899	Lepisosteus_oculatus
ENSORLG00015020297	si:ch211-256m1.8	100	74.224	ENSMAMG00000005651	si:ch211-256m1.8	99	74.048	Mastacembelus_armatus
ENSORLG00015020297	si:ch211-256m1.8	100	76.500	ENSMZEG00005006924	si:ch211-256m1.8	100	76.500	Maylandia_zebra
ENSORLG00015020297	si:ch211-256m1.8	100	71.098	ENSMMOG00000001736	si:ch211-256m1.8	100	70.949	Mola_mola
ENSORLG00015020297	si:ch211-256m1.8	100	76.184	ENSNBRG00000005143	si:ch211-256m1.8	100	76.184	Neolamprologus_brichardi
ENSORLG00015020297	si:ch211-256m1.8	100	98.696	ENSORLG00000022248	si:ch211-256m1.8	100	98.475	Oryzias_latipes
ENSORLG00015020297	si:ch211-256m1.8	100	98.696	ENSORLG00020000214	si:ch211-256m1.8	100	98.666	Oryzias_latipes_hni
ENSORLG00015020297	si:ch211-256m1.8	100	90.690	ENSOMEG00000004519	si:ch211-256m1.8	100	90.690	Oryzias_melastigma
ENSORLG00015020297	si:ch211-256m1.8	95	66.721	ENSPKIG00000007399	si:ch211-256m1.8	99	66.721	Paramormyrops_kingsleyae
ENSORLG00015020297	si:ch211-256m1.8	99	65.841	ENSPMGG00000007698	si:ch211-256m1.8	100	63.228	Periophthalmus_magnuspinnatus
ENSORLG00015020297	si:ch211-256m1.8	100	75.617	ENSPFOG00000005178	si:ch211-256m1.8	100	75.617	Poecilia_formosa
ENSORLG00015020297	si:ch211-256m1.8	100	75.554	ENSPLAG00000006872	si:ch211-256m1.8	100	75.554	Poecilia_latipinna
ENSORLG00015020297	si:ch211-256m1.8	100	75.491	ENSPMEG00000021815	si:ch211-256m1.8	100	75.491	Poecilia_mexicana
ENSORLG00015020297	si:ch211-256m1.8	100	75.427	ENSPREG00000018669	si:ch211-256m1.8	100	75.427	Poecilia_reticulata
ENSORLG00015020297	si:ch211-256m1.8	100	76.184	ENSPNYG00000018038	si:ch211-256m1.8	100	76.184	Pundamilia_nyererei
ENSORLG00015020297	si:ch211-256m1.8	99	65.346	ENSPNAG00000018965	-	99	64.962	Pygocentrus_nattereri
ENSORLG00015020297	si:ch211-256m1.8	99	66.499	ENSPNAG00000003552	si:ch211-256m1.8	99	65.909	Pygocentrus_nattereri
ENSORLG00015020297	si:ch211-256m1.8	100	65.183	ENSSFOG00015008344	si:ch211-256m1.8	100	64.421	Scleropages_formosus
ENSORLG00015020297	si:ch211-256m1.8	100	74.479	ENSSMAG00000007562	si:ch211-256m1.8	100	74.479	Scophthalmus_maximus
ENSORLG00015020297	si:ch211-256m1.8	100	76.631	ENSSDUG00000018180	si:ch211-256m1.8	100	76.631	Seriola_dumerili
ENSORLG00015020297	si:ch211-256m1.8	100	76.567	ENSSLDG00000020310	si:ch211-256m1.8	100	76.567	Seriola_lalandi_dorsalis
ENSORLG00015020297	si:ch211-256m1.8	100	75.869	ENSSPAG00000013419	si:ch211-256m1.8	100	75.869	Stegastes_partitus
ENSORLG00015020297	si:ch211-256m1.8	100	66.906	ENSTRUG00000023803	si:ch211-256m1.8	100	66.667	Takifugu_rubripes
ENSORLG00015020297	si:ch211-256m1.8	100	76.377	ENSXCOG00000017726	si:ch211-256m1.8	100	76.377	Xiphophorus_couchianus
ENSORLG00015020297	si:ch211-256m1.8	100	76.251	ENSXMAG00000026576	si:ch211-256m1.8	100	76.251	Xiphophorus_maculatus