EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSORLG00015020383 (Gene tree)
Gene ID
-
Gene Symbol
RPA1 (1 of many)
Alias
-
Full Name
replication protein A1
Gene Type
protein_coding
Species
Oryzias_latipes_hsok
Status
putative
Strand
Minus strand
Length
40576 bases
Position
chr14:9560227-9600802
Accession
10289
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00015019301tRNA_anti-codonPF01336.253e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00015035505RPA1 (1 of many)-2014138-ENSORLP00015019285645 (aa)--
ENSORLT00015035525RPA1 (1 of many)-2023926-ENSORLP00015019301643 (aa)--
Gene Model
Click here to download ENSORLG00015020383's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015020383's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSORLG00015020383RPA167100.000ENSORLG00015005867-99100.000
ENSORLG00015020383RPA19958.034ENSORLG00015013982rpa19958.034
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00015020383RPA19971.159ENSAPOG00000019409RPA19971.159Acanthochromis_polyacanthus
ENSORLG00015020383RPA19957.524ENSAPOG00000011658rpa19957.994Acanthochromis_polyacanthus
ENSORLG00015020383RPA19754.487ENSAMEG00000007706RPA19654.487Ailuropoda_melanoleuca
ENSORLG00015020383RPA19651.378ENSACIG00000007277rpa19951.378Amphilophus_citrinellus
ENSORLG00015020383RPA19675.000ENSACIG00000012881RPA19975.000Amphilophus_citrinellus
ENSORLG00015020383RPA19975.535ENSAOCG00000009003RPA19975.535Amphiprion_ocellaris
ENSORLG00015020383RPA19958.255ENSAOCG00000023376rpa19958.484Amphiprion_ocellaris
ENSORLG00015020383RPA19957.680ENSAPEG00000008634rpa19957.680Amphiprion_percula
ENSORLG00015020383RPA19974.737ENSAPEG00000019132RPA19974.737Amphiprion_percula
ENSORLG00015020383RPA19973.002ENSATEG00000006443RPA19973.002Anabas_testudineus
ENSORLG00015020383RPA19557.166ENSATEG00000022024rpa19957.166Anabas_testudineus
ENSORLG00015020383RPA19848.039ENSAPLG00000012442RPA110048.237Anas_platyrhynchos
ENSORLG00015020383RPA19949.226ENSACAG00000014490RPA19950.000Anolis_carolinensis
ENSORLG00015020383RPA19754.299ENSANAG00000023456RPA19854.299Aotus_nancymaae
ENSORLG00015020383RPA19459.272ENSACLG00000006640rpa19959.272Astatotilapia_calliptera
ENSORLG00015020383RPA19976.006ENSACLG00000005223RPA19976.006Astatotilapia_calliptera
ENSORLG00015020383RPA19959.168ENSAMXG00000008418rpa19959.657Astyanax_mexicanus
ENSORLG00015020383RPA19954.673ENSBTAG00000009711RPA19954.673Bos_taurus
ENSORLG00015020383RPA19953.427ENSCJAG00000001848RPA19953.787Callithrix_jacchus
ENSORLG00015020383RPA19954.134ENSCAFG00000019249RPA19954.290Canis_familiaris
ENSORLG00015020383RPA19954.134ENSCAFG00020009847RPA19954.290Canis_lupus_dingo
ENSORLG00015020383RPA19953.894ENSCHIG00000026308RPA19954.290Capra_hircus
ENSORLG00015020383RPA19953.738ENSTSYG00000003482-9953.738Carlito_syrichta
ENSORLG00015020383RPA19953.385ENSCPOG00000000035RPA19953.385Cavia_porcellus
ENSORLG00015020383RPA19945.242ENSCCAG00000010981RPA19945.666Cebus_capucinus
ENSORLG00015020383RPA19954.884ENSCLAG00000005185-9954.884Chinchilla_lanigera
ENSORLG00015020383RPA19951.002ENSCLAG00000015045-9951.002Chinchilla_lanigera
ENSORLG00015020383RPA19945.639ENSCSAG00000013833RPA19945.807Chlorocebus_sabaeus
ENSORLG00015020383RPA16764.352ENSCHOG00000009454-9864.352Choloepus_hoffmanni
ENSORLG00015020383RPA19654.369ENSCHOG00000013540-9954.369Choloepus_hoffmanni
ENSORLG00015020383RPA19954.814ENSCPBG00000020377RPA19956.000Chrysemys_picta_bellii
ENSORLG00015020383RPA19940.217ENSCING00000023482-9940.217Ciona_intestinalis
ENSORLG00015020383RPA19754.414ENSCANG00000030911RPA19854.414Colobus_angolensis_palliatus
ENSORLG00015020383RPA19954.673ENSCGRG00001008197Rpa19954.673Cricetulus_griseus_chok1gshd
ENSORLG00015020383RPA17558.727ENSCGRG00000000582Rpa19558.727Cricetulus_griseus_crigri
ENSORLG00015020383RPA19964.506ENSCSEG00000012726RPA19965.391Cynoglossus_semilaevis
ENSORLG00015020383RPA19957.524ENSCSEG00000013066rpa19957.524Cynoglossus_semilaevis
ENSORLG00015020383RPA19957.053ENSCVAG00000019431rpa19957.930Cyprinodon_variegatus
ENSORLG00015020383RPA19672.994ENSCVAG00000013446-9672.994Cyprinodon_variegatus
ENSORLG00015020383RPA19959.034ENSDARG00000003938rpa19959.034Danio_rerio
ENSORLG00015020383RPA19954.702ENSDNOG00000017218RPA19854.702Dasypus_novemcinctus
ENSORLG00015020383RPA19955.296ENSDORG00000006199Rpa19955.296Dipodomys_ordii
ENSORLG00015020383RPA19937.209FBgn0010173RpA-709838.140Drosophila_melanogaster
ENSORLG00015020383RPA18466.327ENSETEG00000017608RPA18366.327Echinops_telfairi
ENSORLG00015020383RPA19654.911ENSEASG00005009372RPA19961.087Equus_asinus_asinus
ENSORLG00015020383RPA19953.978ENSECAG00000023886RPA19953.978Equus_caballus
ENSORLG00015020383RPA16563.636ENSEEUG00000002186-6863.636Erinaceus_europaeus
ENSORLG00015020383RPA19958.540ENSELUG00000021071rpa19958.540Esox_lucius
ENSORLG00015020383RPA16571.703ENSELUG00000006136RPA19271.703Esox_lucius
ENSORLG00015020383RPA19954.134ENSFCAG00000006306RPA19954.134Felis_catus
ENSORLG00015020383RPA19952.550ENSFALG00000006575RPA19952.550Ficedula_albicollis
ENSORLG00015020383RPA19954.729ENSFDAG00000007720RPA19954.729Fukomys_damarensis
ENSORLG00015020383RPA19957.031ENSFHEG00000003580rpa19957.031Fundulus_heteroclitus
ENSORLG00015020383RPA19266.143ENSGMOG00000010382rpa19956.006Gadus_morhua
ENSORLG00015020383RPA19953.333ENSGALG00000003072RPA19953.333Gallus_gallus
ENSORLG00015020383RPA19957.433ENSGAFG00000012916rpa19957.433Gambusia_affinis
ENSORLG00015020383RPA19973.364ENSGAFG00000020953RPA19974.125Gambusia_affinis
ENSORLG00015020383RPA19956.474ENSGACG00000010856rpa19956.474Gasterosteus_aculeatus
ENSORLG00015020383RPA19954.503ENSGAGG00000013611RPA19954.503Gopherus_agassizii
ENSORLG00015020383RPA19953.822ENSGGOG00000014186RPA19953.822Gorilla_gorilla
ENSORLG00015020383RPA19958.216ENSHBUG00000017773rpa19958.216Haplochromis_burtoni
ENSORLG00015020383RPA19661.997ENSHBUG00000009348RPA19861.997Haplochromis_burtoni
ENSORLG00015020383RPA19953.643ENSHGLG00000008846RPA110055.039Heterocephalus_glaber_female
ENSORLG00015020383RPA19946.562ENSHGLG00100002005-9946.562Heterocephalus_glaber_male
ENSORLG00015020383RPA19951.163ENSHGLG00100000799-9951.163Heterocephalus_glaber_male
ENSORLG00015020383RPA19953.643ENSHGLG00100017755-10055.039Heterocephalus_glaber_male
ENSORLG00015020383RPA19953.365ENSHCOG00000001401rpa19953.991Hippocampus_comes
ENSORLG00015020383RPA19946.995ENSHCOG00000000351RPA19656.132Hippocampus_comes
ENSORLG00015020383RPA19958.879ENSIPUG00000004400rpa19958.879Ictalurus_punctatus
ENSORLG00015020383RPA19652.070ENSSTOG00000022475RPA19952.070Ictidomys_tridecemlineatus
ENSORLG00015020383RPA19655.000ENSJJAG00000000876Rpa19855.000Jaculus_jaculus
ENSORLG00015020383RPA19972.628ENSKMAG00000000234RPA19972.628Kryptolebias_marmoratus
ENSORLG00015020383RPA19957.566ENSKMAG00000005605rpa19958.346Kryptolebias_marmoratus
ENSORLG00015020383RPA19956.786ENSLBEG00000021604rpa19956.786Labrus_bergylta
ENSORLG00015020383RPA19965.957ENSLBEG00000002281RPA19966.525Labrus_bergylta
ENSORLG00015020383RPA17057.235ENSLACG00000007210RPA19357.235Latimeria_chalumnae
ENSORLG00015020383RPA19957.076ENSLOCG00000006397rpa19957.232Lepisosteus_oculatus
ENSORLG00015020383RPA19755.056ENSLAFG00000015354RPA19952.273Loxodonta_africana
ENSORLG00015020383RPA18152.372ENSMFAG00000036138-9852.372Macaca_fascicularis
ENSORLG00015020383RPA19953.678ENSMMUG00000011604-9953.822Macaca_mulatta
ENSORLG00015020383RPA19950.467ENSMMUG00000002442-9950.467Macaca_mulatta
ENSORLG00015020383RPA19653.548ENSMNEG00000031632-9853.698Macaca_nemestrina
ENSORLG00015020383RPA18058.259ENSMNEG00000029837-9558.259Macaca_nemestrina
ENSORLG00015020383RPA19751.204ENSMLEG00000038768-9852.000Mandrillus_leucophaeus
ENSORLG00015020383RPA19957.210ENSMAMG00000017993rpa19957.210Mastacembelus_armatus
ENSORLG00015020383RPA110072.230ENSMAMG00000020097RPA110072.511Mastacembelus_armatus
ENSORLG00015020383RPA19958.216ENSMZEG00005007551rpa19958.216Maylandia_zebra
ENSORLG00015020383RPA19976.006ENSMZEG00005024731RPA19976.006Maylandia_zebra
ENSORLG00015020383RPA19952.904ENSMGAG00000005315RPA19852.904Meleagris_gallopavo
ENSORLG00015020383RPA19654.984ENSMAUG00000010474Rpa19854.750Mesocricetus_auratus
ENSORLG00015020383RPA19953.906ENSMICG00000012867RPA19954.062Microcebus_murinus
ENSORLG00015020383RPA19953.882ENSMOCG00000013019Rpa19953.882Microtus_ochrogaster
ENSORLG00015020383RPA19956.113ENSMMOG00000014292rpa19957.258Mola_mola
ENSORLG00015020383RPA19870.774ENSMMOG00000010868RPA19782.494Mola_mola
ENSORLG00015020383RPA19954.109ENSMODG00000010549RPA19954.109Monodelphis_domestica
ENSORLG00015020383RPA19966.481ENSMALG00000001208RPA19879.089Monopterus_albus
ENSORLG00015020383RPA19957.704ENSMALG00000011453rpa19957.704Monopterus_albus
ENSORLG00015020383RPA19953.991MGP_CAROLIEiJ_G0016734Rpa19954.219Mus_caroli
ENSORLG00015020383RPA19953.978ENSMUSG00000000751Rpa19953.978Mus_musculus
ENSORLG00015020383RPA19954.304MGP_PahariEiJ_G0017871Rpa19954.304Mus_pahari
ENSORLG00015020383RPA19953.906MGP_SPRETEiJ_G0017577Rpa19954.037Mus_spretus
ENSORLG00015020383RPA19953.666ENSMPUG00000013119RPA19953.666Mustela_putorius_furo
ENSORLG00015020383RPA19755.326ENSMLUG00000006113RPA19555.326Myotis_lucifugus
ENSORLG00015020383RPA19654.927ENSNGAG00000004522Rpa19454.927Nannospalax_galili
ENSORLG00015020383RPA19458.717ENSNBRG00000020595rpa19958.717Neolamprologus_brichardi
ENSORLG00015020383RPA19868.388ENSNBRG00000009672RPA19768.388Neolamprologus_brichardi
ENSORLG00015020383RPA19953.894ENSNLEG00000017149RPA19954.348Nomascus_leucogenys
ENSORLG00015020383RPA19747.143ENSMEUG00000006714RPA19846.900Notamacropus_eugenii
ENSORLG00015020383RPA19656.220ENSODEG00000009038RPA19656.220Octodon_degus
ENSORLG00015020383RPA19958.190ENSONIG00000013135rpa19958.190Oreochromis_niloticus
ENSORLG00015020383RPA19755.128ENSOANG00000010880RPA19855.288Ornithorhynchus_anatinus
ENSORLG00015020383RPA19952.410ENSOCUG00000001504RPA19952.410Oryctolagus_cuniculus
ENSORLG00015020383RPA110096.794ENSORLG00000003368RPA110096.641Oryzias_latipes
ENSORLG00015020383RPA19957.878ENSORLG00000004856rpa19957.878Oryzias_latipes
ENSORLG00015020383RPA19958.034ENSORLG00020008980rpa19958.034Oryzias_latipes_hni
ENSORLG00015020383RPA110095.052ENSORLG00020015284RPA110094.753Oryzias_latipes_hni
ENSORLG00015020383RPA19956.786ENSOMEG00000004704rpa19859.914Oryzias_melastigma
ENSORLG00015020383RPA19982.839ENSOMEG00000011040RPA19884.491Oryzias_melastigma
ENSORLG00015020383RPA19448.980ENSOGAG00000029379-9948.980Otolemur_garnettii
ENSORLG00015020383RPA19954.290ENSOGAG00000005581-9954.290Otolemur_garnettii
ENSORLG00015020383RPA19953.894ENSOARG00000014479RPA19954.290Ovis_aries
ENSORLG00015020383RPA19953.894ENSPPAG00000039680RPA19954.348Pan_paniscus
ENSORLG00015020383RPA19953.953ENSPPRG00000011807RPA19953.953Panthera_pardus
ENSORLG00015020383RPA19954.134ENSPTIG00000007898RPA19954.134Panthera_tigris_altaica
ENSORLG00015020383RPA19953.738ENSPTRG00000008539RPA19954.193Pan_troglodytes
ENSORLG00015020383RPA19953.583ENSPANG00000024592RPA19953.583Papio_anubis
ENSORLG00015020383RPA19558.497ENSPKIG00000008053rpa19459.314Paramormyrops_kingsleyae
ENSORLG00015020383RPA19753.933ENSPSIG00000015617RPA19853.933Pelodiscus_sinensis
ENSORLG00015020383RPA19955.781ENSPMGG00000011589rpa19955.781Periophthalmus_magnuspinnatus
ENSORLG00015020383RPA19963.037ENSPMGG00000000543RPA19965.997Periophthalmus_magnuspinnatus
ENSORLG00015020383RPA19954.219ENSPEMG00000021061Rpa19954.219Peromyscus_maniculatus_bairdii
ENSORLG00015020383RPA19953.023ENSPCIG00000019049RPA19953.798Phascolarctos_cinereus
ENSORLG00015020383RPA19956.964ENSPFOG00000003987rpa19956.964Poecilia_formosa
ENSORLG00015020383RPA19957.121ENSPLAG00000004984rpa19957.121Poecilia_latipinna
ENSORLG00015020383RPA19574.038ENSPLAG00000008844-9774.038Poecilia_latipinna
ENSORLG00015020383RPA19956.964ENSPMEG00000020602rpa19957.095Poecilia_mexicana
ENSORLG00015020383RPA19573.151ENSPMEG00000003627-9773.955Poecilia_mexicana
ENSORLG00015020383RPA19749.920ENSPREG00000010174rpa19949.920Poecilia_reticulata
ENSORLG00015020383RPA19971.852ENSPREG00000010119RPA19972.781Poecilia_reticulata
ENSORLG00015020383RPA19953.727ENSPCOG00000001799RPA19953.727Propithecus_coquereli
ENSORLG00015020383RPA19953.488ENSPVAG00000002149RPA19953.488Pteropus_vampyrus
ENSORLG00015020383RPA19958.372ENSPNYG00000016316rpa19959.272Pundamilia_nyererei
ENSORLG00015020383RPA19976.006ENSPNYG00000024165RPA19976.006Pundamilia_nyererei
ENSORLG00015020383RPA19951.969ENSPNAG00000008599rpa19951.235Pygocentrus_nattereri
ENSORLG00015020383RPA19953.834ENSRNOG00000003123Rpa19954.617Rattus_norvegicus
ENSORLG00015020383RPA19953.560ENSRBIG00000036587RPA19953.560Rhinopithecus_bieti
ENSORLG00015020383RPA19950.464ENSRROG00000043278RPA19950.464Rhinopithecus_roxellana
ENSORLG00015020383RPA16935.045YAR007CRFA17235.045Saccharomyces_cerevisiae
ENSORLG00015020383RPA19153.729ENSSBOG00000030233RPA19754.118Saimiri_boliviensis_boliviensis
ENSORLG00015020383RPA19754.896ENSSHAG00000007969RPA19555.377Sarcophilus_harrisii
ENSORLG00015020383RPA19959.409ENSSFOG00015005362rpa19259.409Scleropages_formosus
ENSORLG00015020383RPA19973.083ENSSMAG00000019746RPA19973.343Scophthalmus_maximus
ENSORLG00015020383RPA19957.210ENSSDUG00000011949rpa19957.210Seriola_dumerili
ENSORLG00015020383RPA19972.247ENSSDUG00000016358RPA19972.459Seriola_dumerili
ENSORLG00015020383RPA19971.429ENSSLDG00000020784RPA19971.491Seriola_lalandi_dorsalis
ENSORLG00015020383RPA19957.367ENSSLDG00000011806rpa19957.367Seriola_lalandi_dorsalis
ENSORLG00015020383RPA18671.875ENSSARG00000007506RPA18771.875Sorex_araneus
ENSORLG00015020383RPA19753.612ENSSPUG00000007223RPA19853.612Sphenodon_punctatus
ENSORLG00015020383RPA19870.886ENSSPAG00000011165RPA19871.339Stegastes_partitus
ENSORLG00015020383RPA19956.583ENSSPAG00000009903rpa19956.583Stegastes_partitus
ENSORLG00015020383RPA19754.647ENSSSCG00000017822RPA19762.556Sus_scrofa
ENSORLG00015020383RPA19952.713ENSTGUG00000005775RPA19952.713Taeniopygia_guttata
ENSORLG00015020383RPA19958.438ENSTRUG00000003616rpa19958.438Takifugu_rubripes
ENSORLG00015020383RPA19965.826ENSTRUG00000000405RPA19966.014Takifugu_rubripes
ENSORLG00015020383RPA19958.696ENSTNIG00000016199rpa19958.696Tetraodon_nigroviridis
ENSORLG00015020383RPA16862.557ENSTBEG00000002709RPA17362.557Tupaia_belangeri
ENSORLG00015020383RPA19953.583ENSTTRG00000001169RPA19954.134Tursiops_truncatus
ENSORLG00015020383RPA18775.000ENSUAMG00000015676RPA19575.000Ursus_americanus
ENSORLG00015020383RPA19953.894ENSUMAG00000009328RPA19953.822Ursus_maritimus
ENSORLG00015020383RPA19952.648ENSVPAG00000009443RPA19952.648Vicugna_pacos
ENSORLG00015020383RPA19953.966ENSVVUG00000021715RPA19954.121Vulpes_vulpes
ENSORLG00015020383RPA19955.156ENSXETG00000013538rpa19955.625Xenopus_tropicalis
ENSORLG00015020383RPA19356.240ENSXCOG00000010068rpa19457.290Xiphophorus_couchianus
ENSORLG00015020383RPA19571.475ENSXCOG00000009899-9971.475Xiphophorus_couchianus
ENSORLG00015020383RPA19957.590ENSXMAG00000004102rpa19958.097Xiphophorus_maculatus
ENSORLG00015020383RPA19969.429ENSXMAG00000010333RPA19970.000Xiphophorus_maculatus

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