EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015020441 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 14273 bases
Position: chr7:29002496-29016768
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015034440	MMR_HSR1	PF01926.23	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015028281	-	1994	-	ENSORLP00015034440	204 (aa)	-	-

Gene Model

Click here to download ENSORLG00015020441's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015020441's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015020441	-	89	32.240	ENSORLG00015012854	rab5aa	80	32.240
ENSORLG00015020441	-	90	33.333	ENSORLG00015000142	si:dkey-34d22.5	82	33.333
ENSORLG00015020441	-	84	31.214	ENSORLG00015019591	rab11al	77	31.214
ENSORLG00015020441	-	84	34.104	ENSORLG00015004273	rab42a	78	34.104
ENSORLG00015020441	-	85	33.333	ENSORLG00015013638	rab15	79	32.759
ENSORLG00015020441	-	81	30.000	ENSORLG00015006780	-	87	30.000
ENSORLG00015020441	-	84	35.465	ENSORLG00015015121	si:dkey-13a21.4	83	35.465
ENSORLG00015020441	-	60	30.328	ENSORLG00015018436	arl8bb	61	30.328
ENSORLG00015020441	-	67	34.507	ENSORLG00015013453	-	57	34.507
ENSORLG00015020441	-	83	33.529	ENSORLG00015003202	RAB39B	79	33.140
ENSORLG00015020441	-	98	32.000	ENSORLG00015004265	rab9b	93	32.000
ENSORLG00015020441	-	83	34.706	ENSORLG00015010986	rab1ab	81	34.706
ENSORLG00015020441	-	87	32.990	ENSORLG00015006881	rab14	87	32.990
ENSORLG00015020441	-	84	31.395	ENSORLG00015004377	RAB15	80	31.395
ENSORLG00015020441	-	82	38.462	ENSORLG00015014594	rab3db	74	38.462
ENSORLG00015020441	-	87	33.679	ENSORLG00015000893	-	87	33.679
ENSORLG00015020441	-	83	35.294	ENSORLG00015010042	rab35b	98	33.010
ENSORLG00015020441	-	88	33.149	ENSORLG00015022289	-	83	33.149
ENSORLG00015020441	-	80	30.120	ENSORLG00015002191	rheb	86	30.120
ENSORLG00015020441	-	90	32.000	ENSORLG00015000618	-	97	32.000
ENSORLG00015020441	-	60	30.894	ENSORLG00015018698	-	61	31.707
ENSORLG00015020441	-	75	33.333	ENSORLG00015016047	zgc:101559	64	33.333
ENSORLG00015020441	-	97	30.841	ENSORLG00015012872	rab33ba	88	30.841
ENSORLG00015020441	-	83	34.503	ENSORLG00015013564	-	81	32.934
ENSORLG00015020441	-	97	33.838	ENSORLG00015007182	rab18b	93	33.838
ENSORLG00015020441	-	91	33.684	ENSORLG00015004033	rab23	83	34.634
ENSORLG00015020441	-	82	32.738	ENSORLG00015006820	-	81	32.738
ENSORLG00015020441	-	88	37.569	ENSORLG00015015518	-	87	37.569
ENSORLG00015020441	-	83	33.140	ENSORLG00015020173	rab11bb	76	33.140
ENSORLG00015020441	-	84	32.759	ENSORLG00015016946	rab11ba	63	32.759
ENSORLG00015020441	-	91	36.170	ENSORLG00015007869	rab12	77	35.938
ENSORLG00015020441	-	84	33.333	ENSORLG00015010098	zgc:171927	78	33.333
ENSORLG00015020441	-	84	33.333	ENSORLG00015010257	rab11a	78	33.333
ENSORLG00015020441	-	83	33.140	ENSORLG00015016999	RAB11B	76	33.140
ENSORLG00015020441	-	83	33.918	ENSORLG00015020972	rab30	81	33.918
ENSORLG00015020441	-	81	31.737	ENSORLG00015021900	rab5c	74	31.737
ENSORLG00015020441	-	86	30.114	ENSORLG00015010161	RAB41	81	30.114
ENSORLG00015020441	-	82	33.533	ENSORLG00015004739	rab18a	79	33.533
ENSORLG00015020441	-	88	43.103	ENSORLG00015002344	-	87	31.868

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015020441	-	100	72.330	ENSATEG00000024739	RAB29	100	72.330	Anabas_testudineus
ENSORLG00015020441	-	81	83.636	ENSACLG00000008602	RAB29	100	83.636	Astatotilapia_calliptera
ENSORLG00015020441	-	100	69.417	ENSCVAG00000014038	RAB29	100	69.417	Cyprinodon_variegatus
ENSORLG00015020441	-	98	50.000	ENSEBUG00000002259	RAB29	98	49.020	Eptatretus_burgeri
ENSORLG00015020441	-	80	73.006	ENSFHEG00000015993	RAB29	80	73.006	Fundulus_heteroclitus
ENSORLG00015020441	-	80	69.512	ENSGMOG00000018475	RAB29	99	69.512	Gadus_morhua
ENSORLG00015020441	-	100	69.903	ENSGAFG00000000629	RAB29	100	69.903	Gambusia_affinis
ENSORLG00015020441	-	100	70.874	ENSGACG00000010473	RAB29	99	70.874	Gasterosteus_aculeatus
ENSORLG00015020441	-	100	76.923	ENSHBUG00000012594	RAB29	100	76.923	Haplochromis_burtoni
ENSORLG00015020441	-	99	69.458	ENSKMAG00000017150	-	91	69.458	Kryptolebias_marmoratus
ENSORLG00015020441	-	99	74.146	ENSLBEG00000006152	-	100	74.146	Labrus_bergylta
ENSORLG00015020441	-	99	74.146	ENSLBEG00000018812	RAB29	100	74.146	Labrus_bergylta
ENSORLG00015020441	-	84	55.556	ENSLACG00000002523	RAB29	83	55.556	Latimeria_chalumnae
ENSORLG00015020441	-	100	72.330	ENSMAMG00000006963	RAB29	100	72.330	Mastacembelus_armatus
ENSORLG00015020441	-	100	76.442	ENSMZEG00005026799	RAB29	100	76.442	Maylandia_zebra
ENSORLG00015020441	-	100	73.786	ENSMALG00000018436	RAB29	90	73.786	Monopterus_albus
ENSORLG00015020441	-	79	82.609	ENSNBRG00000008714	RAB29	71	82.609	Neolamprologus_brichardi
ENSORLG00015020441	-	100	75.962	ENSONIG00000014892	RAB29	100	75.962	Oreochromis_niloticus
ENSORLG00015020441	-	100	98.529	ENSORLG00000027892	RAB29	100	98.529	Oryzias_latipes
ENSORLG00015020441	-	100	95.098	ENSORLG00020005240	RAB29	100	95.098	Oryzias_latipes_hni
ENSORLG00015020441	-	100	91.667	ENSOMEG00000000336	RAB29	100	91.667	Oryzias_melastigma
ENSORLG00015020441	-	86	74.286	ENSPMGG00000008290	-	100	68.137	Periophthalmus_magnuspinnatus
ENSORLG00015020441	-	100	64.078	ENSPFOG00000013066	RAB29	99	64.078	Poecilia_formosa
ENSORLG00015020441	-	99	65.025	ENSPLAG00000002600	RAB29	95	65.025	Poecilia_latipinna
ENSORLG00015020441	-	100	64.563	ENSPMEG00000021807	RAB29	100	64.563	Poecilia_mexicana
ENSORLG00015020441	-	100	67.961	ENSPREG00000020276	RAB29	100	67.961	Poecilia_reticulata
ENSORLG00015020441	-	100	76.442	ENSPNYG00000015355	RAB29	100	76.442	Pundamilia_nyererei
ENSORLG00015020441	-	100	69.565	ENSSDUG00000006543	RAB29	100	69.565	Seriola_dumerili
ENSORLG00015020441	-	84	54.971	ENSSPUG00000015007	RAB29	84	54.971	Sphenodon_punctatus
ENSORLG00015020441	-	100	68.932	ENSSPAG00000002062	RAB29	100	68.932	Stegastes_partitus
ENSORLG00015020441	-	100	69.417	ENSXCOG00000016370	RAB29	100	69.417	Xiphophorus_couchianus
ENSORLG00015020441	-	100	69.903	ENSXMAG00000029823	RAB29	100	69.903	Xiphophorus_maculatus