EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015020471 (Gene tree)
Gene ID: -
Gene Symbol: srek1
Alias: -
Full Name: splicing regulatory glutamine/lysine-rich protein 1
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 2700 bases
Position: chr12:4260791-4263490
Accession: ZDB-GENE-040801-132
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015034472	RRM_1	PF00076.22	9.8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015035551	-	585	-	ENSORLP00015034472	194 (aa)	-	-

Gene Model

Click here to download ENSORLG00015020471's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015020471's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015020471	srek1	54	30.631	ENSORLG00015004376	ncbp2	67	30.631

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015020471	srek1	92	76.503	ENSG00000153914	SREK1	73	86.364	Homo_sapiens
ENSORLG00015020471	srek1	96	84.409	ENSACIG00000015041	srek1	98	84.409	Amphilophus_citrinellus
ENSORLG00015020471	srek1	99	72.959	ENSANAG00000031358	SREK1	91	76.630	Aotus_nancymaae
ENSORLG00015020471	srek1	94	86.339	ENSACLG00000026754	srek1	61	86.339	Astatotilapia_calliptera
ENSORLG00015020471	srek1	99	72.959	ENSCJAG00000015950	SREK1	91	76.630	Callithrix_jacchus
ENSORLG00015020471	srek1	91	74.444	ENSCAFG00020019448	-	89	74.444	Canis_lupus_dingo
ENSORLG00015020471	srek1	93	77.174	ENSTSYG00000036957	SREK1	91	77.174	Carlito_syrichta
ENSORLG00015020471	srek1	93	76.630	ENSCATG00000031482	SREK1	91	76.630	Cercocebus_atys
ENSORLG00015020471	srek1	69	89.474	ENSCPBG00000026866	SREK1	59	71.642	Chrysemys_picta_bellii
ENSORLG00015020471	srek1	93	76.630	ENSCANG00000030421	SREK1	91	76.630	Colobus_angolensis_palliatus
ENSORLG00015020471	srek1	94	86.813	ENSCVAG00000002411	srek1	86	86.813	Cyprinodon_variegatus
ENSORLG00015020471	srek1	93	76.630	ENSDORG00000023425	-	91	76.630	Dipodomys_ordii
ENSORLG00015020471	srek1	93	77.174	ENSEASG00005006829	-	91	77.174	Equus_asinus_asinus
ENSORLG00015020471	srek1	93	77.174	ENSECAG00000036994	-	91	77.174	Equus_caballus
ENSORLG00015020471	srek1	93	76.630	ENSGGOG00000004737	SREK1	91	76.630	Gorilla_gorilla
ENSORLG00015020471	srek1	94	86.339	ENSHBUG00000007057	srek1	97	86.339	Haplochromis_burtoni
ENSORLG00015020471	srek1	94	80.220	ENSHCOG00000017240	SREK1	53	80.220	Hippocampus_comes
ENSORLG00015020471	srek1	93	76.087	ENSJJAG00000000214	-	91	76.087	Jaculus_jaculus
ENSORLG00015020471	srek1	99	80.829	ENSLBEG00000022980	srek1	96	80.829	Labrus_bergylta
ENSORLG00015020471	srek1	93	76.630	ENSMFAG00000039823	SREK1	91	76.630	Macaca_fascicularis
ENSORLG00015020471	srek1	93	76.630	ENSMNEG00000030723	SREK1	91	76.630	Macaca_nemestrina
ENSORLG00015020471	srek1	93	76.630	ENSMLEG00000039078	SREK1	91	76.630	Mandrillus_leucophaeus
ENSORLG00015020471	srek1	94	86.339	ENSMZEG00005005719	srek1	97	86.339	Maylandia_zebra
ENSORLG00015020471	srek1	65	75.781	ENSMGAG00000002047	SREK1	68	64.444	Meleagris_gallopavo
ENSORLG00015020471	srek1	92	76.923	ENSMAUG00000010066	-	57	77.049	Mesocricetus_auratus
ENSORLG00015020471	srek1	93	76.630	ENSMICG00000034959	SREK1	91	76.630	Microcebus_murinus
ENSORLG00015020471	srek1	92	76.923	ENSMOCG00000001536	-	56	77.049	Microtus_ochrogaster
ENSORLG00015020471	srek1	94	86.264	ENSMMOG00000008409	srek1	91	86.264	Mola_mola
ENSORLG00015020471	srek1	93	77.049	ENSNGAG00000017527	-	91	77.174	Nannospalax_galili
ENSORLG00015020471	srek1	94	86.885	ENSNBRG00000010718	srek1	97	86.885	Neolamprologus_brichardi
ENSORLG00015020471	srek1	94	89.071	ENSONIG00000011080	srek1	53	86.082	Oreochromis_niloticus
ENSORLG00015020471	srek1	93	76.630	ENSPPAG00000031605	SREK1	91	76.630	Pan_paniscus
ENSORLG00015020471	srek1	93	76.630	ENSPTRG00000016936	SREK1	91	76.630	Pan_troglodytes
ENSORLG00015020471	srek1	93	76.630	ENSPANG00000008953	SREK1	91	76.630	Papio_anubis
ENSORLG00015020471	srek1	94	79.121	ENSPMGG00000017031	srek1	98	79.121	Periophthalmus_magnuspinnatus
ENSORLG00015020471	srek1	92	76.923	ENSPEMG00000024051	-	63	72.637	Peromyscus_maniculatus_bairdii
ENSORLG00015020471	srek1	93	77.174	ENSPCIG00000017750	-	91	77.174	Phascolarctos_cinereus
ENSORLG00015020471	srek1	94	88.462	ENSPLAG00000008827	srek1	99	88.462	Poecilia_latipinna
ENSORLG00015020471	srek1	91	89.205	ENSPREG00000019912	srek1	98	89.205	Poecilia_reticulata
ENSORLG00015020471	srek1	93	76.630	ENSPCOG00000026230	SREK1	91	76.630	Propithecus_coquereli
ENSORLG00015020471	srek1	93	77.174	ENSRBIG00000033818	SREK1	92	77.174	Rhinopithecus_bieti
ENSORLG00015020471	srek1	93	76.630	ENSRROG00000017210	SREK1	91	76.630	Rhinopithecus_roxellana
ENSORLG00015020471	srek1	93	76.630	ENSSBOG00000031230	SREK1	91	76.630	Saimiri_boliviensis_boliviensis
ENSORLG00015020471	srek1	93	74.332	ENSSPUG00000016553	SREK1	57	74.332	Sphenodon_punctatus
ENSORLG00015020471	srek1	94	87.978	ENSSPAG00000022298	srek1	99	87.978	Stegastes_partitus
ENSORLG00015020471	srek1	95	81.522	ENSTRUG00000002960	srek1	97	81.522	Takifugu_rubripes
ENSORLG00015020471	srek1	93	76.630	ENSUAMG00000022661	-	91	76.630	Ursus_americanus
ENSORLG00015020471	srek1	81	79.012	ENSVVUG00000005890	-	89	74.444	Vulpes_vulpes
ENSORLG00015020471	srek1	94	86.813	ENSXCOG00000017793	srek1	97	86.813	Xiphophorus_couchianus