EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015020608 (Gene tree)
Gene ID: -
Gene Symbol: LARP4B
Alias: -
Full Name: La ribonucleoprotein domain family member 4B
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 48317 bases
Position: chr17:8908879-8957195
Accession: 28987
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015034540	La	PF05383.17	1.5e-13	1	1
ENSORLP00015019516	La	PF05383.17	1.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015028480	LARP4B-202	6474	-	ENSORLP00015019516	758 (aa)	-	-
ENSORLT00015028460	LARP4B-201	6300	-	ENSORLP00015034540	700 (aa)	-	-

Gene Model

Click here to download ENSORLG00015020608's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015020608's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015020608	LARP4B	74	40.942	ENSORLG00015002292	larp4aa	67	40.942

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015020608	LARP4B	100	54.705	ENSG00000107929	LARP4B	100	54.580	Homo_sapiens
ENSORLG00015020608	LARP4B	100	74.828	ENSAPOG00000020531	LARP4B	95	86.762	Acanthochromis_polyacanthus
ENSORLG00015020608	LARP4B	91	55.055	ENSAMEG00000001810	LARP4B	100	53.191	Ailuropoda_melanoleuca
ENSORLG00015020608	LARP4B	98	70.845	ENSAOCG00000007887	-	99	86.404	Amphiprion_ocellaris
ENSORLG00015020608	LARP4B	93	83.310	ENSAPEG00000002512	LARP4B	96	81.165	Amphiprion_percula
ENSORLG00015020608	LARP4B	100	81.830	ENSATEG00000012614	LARP4B	100	81.830	Anabas_testudineus
ENSORLG00015020608	LARP4B	100	57.769	ENSAPLG00000003813	LARP4B	98	57.143	Anas_platyrhynchos
ENSORLG00015020608	LARP4B	100	59.539	ENSACAG00000002858	LARP4B	100	59.283	Anolis_carolinensis
ENSORLG00015020608	LARP4B	100	54.010	ENSANAG00000007531	-	100	53.885	Aotus_nancymaae
ENSORLG00015020608	LARP4B	100	83.520	ENSACLG00000026356	LARP4B	100	83.799	Astatotilapia_calliptera
ENSORLG00015020608	LARP4B	94	53.721	ENSAMXG00000003335	larp4b	96	53.586	Astyanax_mexicanus
ENSORLG00015020608	LARP4B	97	55.601	ENSBTAG00000013899	LARP4B	97	55.466	Bos_taurus
ENSORLG00015020608	LARP4B	100	54.397	ENSCJAG00000018434	LARP4B	100	54.271	Callithrix_jacchus
ENSORLG00015020608	LARP4B	91	56.181	ENSCAFG00020004209	LARP4B	100	54.214	Canis_lupus_dingo
ENSORLG00015020608	LARP4B	97	54.271	ENSCHIG00000013543	LARP4B	98	53.876	Capra_hircus
ENSORLG00015020608	LARP4B	88	59.936	ENSTSYG00000002568	LARP4B	99	59.777	Carlito_syrichta
ENSORLG00015020608	LARP4B	88	55.079	ENSCAPG00000009725	LARP4B	85	53.544	Cavia_aperea
ENSORLG00015020608	LARP4B	100	54.843	ENSCPOG00000009375	LARP4B	100	54.717	Cavia_porcellus
ENSORLG00015020608	LARP4B	100	54.135	ENSCCAG00000024869	LARP4B	100	54.010	Cebus_capucinus
ENSORLG00015020608	LARP4B	100	55.082	ENSCATG00000019750	LARP4B	100	54.956	Cercocebus_atys
ENSORLG00015020608	LARP4B	100	55.425	ENSCLAG00000011570	LARP4B	100	55.556	Chinchilla_lanigera
ENSORLG00015020608	LARP4B	64	75.758	ENSCHOG00000007831	-	59	75.758	Choloepus_hoffmanni
ENSORLG00015020608	LARP4B	100	59.126	ENSCPBG00000017063	LARP4B	100	58.355	Chrysemys_picta_bellii
ENSORLG00015020608	LARP4B	100	53.199	ENSCANG00000038021	LARP4B	100	53.074	Colobus_angolensis_palliatus
ENSORLG00015020608	LARP4B	100	54.300	ENSCGRG00001022930	Larp4b	100	60.315	Cricetulus_griseus_chok1gshd
ENSORLG00015020608	LARP4B	100	54.300	ENSCGRG00000006022	Larp4b	100	60.315	Cricetulus_griseus_crigri
ENSORLG00015020608	LARP4B	100	72.524	ENSCSEG00000007342	LARP4B	100	72.524	Cynoglossus_semilaevis
ENSORLG00015020608	LARP4B	100	81.294	ENSCVAG00000008910	LARP4B	100	82.203	Cyprinodon_variegatus
ENSORLG00015020608	LARP4B	97	52.756	ENSDARG00000062146	larp4b	98	53.150	Danio_rerio
ENSORLG00015020608	LARP4B	96	54.886	ENSDNOG00000045543	-	100	60.437	Dasypus_novemcinctus
ENSORLG00015020608	LARP4B	100	52.196	ENSDORG00000009328	Larp4b	100	52.070	Dipodomys_ordii
ENSORLG00015020608	LARP4B	88	57.265	ENSETEG00000011249	LARP4B	90	57.771	Echinops_telfairi
ENSORLG00015020608	LARP4B	91	55.267	ENSEASG00005019068	-	100	53.383	Equus_asinus_asinus
ENSORLG00015020608	LARP4B	91	55.677	ENSECAG00000024040	LARP4B	100	53.759	Equus_caballus
ENSORLG00015020608	LARP4B	91	54.772	ENSEEUG00000008391	LARP4B	98	52.994	Erinaceus_europaeus
ENSORLG00015020608	LARP4B	100	69.975	ENSELUG00000008626	LARP4B	100	69.975	Esox_lucius
ENSORLG00015020608	LARP4B	88	41.752	ENSELUG00000001417	-	94	42.618	Esox_lucius
ENSORLG00015020608	LARP4B	91	56.241	ENSFCAG00000000721	-	100	54.340	Felis_catus
ENSORLG00015020608	LARP4B	100	59.794	ENSFALG00000006961	LARP4B	100	58.333	Ficedula_albicollis
ENSORLG00015020608	LARP4B	100	54.937	ENSFDAG00000006158	LARP4B	97	54.810	Fukomys_damarensis
ENSORLG00015020608	LARP4B	100	67.018	ENSFHEG00000013037	LARP4B	100	67.150	Fundulus_heteroclitus
ENSORLG00015020608	LARP4B	78	75.591	ENSGMOG00000010818	-	83	76.115	Gadus_morhua
ENSORLG00015020608	LARP4B	100	58.333	ENSGALG00000006672	LARP4B	100	57.436	Gallus_gallus
ENSORLG00015020608	LARP4B	100	72.581	ENSGACG00000017535	LARP4B	98	72.705	Gasterosteus_aculeatus
ENSORLG00015020608	LARP4B	94	57.666	ENSGAGG00000008598	LARP4B	100	57.395	Gopherus_agassizii
ENSORLG00015020608	LARP4B	100	54.580	ENSGGOG00000003572	LARP4B	100	54.386	Gorilla_gorilla
ENSORLG00015020608	LARP4B	100	84.626	ENSHBUG00000007535	LARP4B	100	84.908	Haplochromis_burtoni
ENSORLG00015020608	LARP4B	100	55.344	ENSHGLG00000012936	LARP4B	100	61.565	Heterocephalus_glaber_female
ENSORLG00015020608	LARP4B	100	55.220	ENSHGLG00100016220	-	100	55.094	Heterocephalus_glaber_male
ENSORLG00015020608	LARP4B	86	49.923	ENSHGLG00100017261	-	100	49.770	Heterocephalus_glaber_male
ENSORLG00015020608	LARP4B	99	68.793	ENSHCOG00000011581	LARP4B	89	68.793	Hippocampus_comes
ENSORLG00015020608	LARP4B	94	53.324	ENSIPUG00000009705	larp4b	97	53.053	Ictalurus_punctatus
ENSORLG00015020608	LARP4B	100	54.731	ENSSTOG00000000587	LARP4B	100	53.197	Ictidomys_tridecemlineatus
ENSORLG00015020608	LARP4B	100	54.899	ENSJJAG00000020847	Larp4b	100	54.774	Jaculus_jaculus
ENSORLG00015020608	LARP4B	100	83.780	ENSKMAG00000021674	LARP4B	100	84.485	Kryptolebias_marmoratus
ENSORLG00015020608	LARP4B	80	82.022	ENSLBEG00000025293	-	85	82.183	Labrus_bergylta
ENSORLG00015020608	LARP4B	94	57.497	ENSLACG00000009492	LARP4B	100	57.634	Latimeria_chalumnae
ENSORLG00015020608	LARP4B	100	63.449	ENSLOCG00000012290	larp4b	100	63.974	Lepisosteus_oculatus
ENSORLG00015020608	LARP4B	100	55.006	ENSLAFG00000015334	LARP4B	100	54.880	Loxodonta_africana
ENSORLG00015020608	LARP4B	100	55.082	ENSMFAG00000001766	LARP4B	100	53.074	Macaca_fascicularis
ENSORLG00015020608	LARP4B	100	55.082	ENSMMUG00000005279	LARP4B	100	54.956	Macaca_mulatta
ENSORLG00015020608	LARP4B	100	54.956	ENSMNEG00000014019	LARP4B	100	52.949	Macaca_nemestrina
ENSORLG00015020608	LARP4B	100	54.819	ENSMLEG00000035198	LARP4B	100	54.693	Mandrillus_leucophaeus
ENSORLG00015020608	LARP4B	100	82.315	ENSMAMG00000013742	LARP4B	100	82.315	Mastacembelus_armatus
ENSORLG00015020608	LARP4B	100	72.943	ENSMZEG00005006498	-	97	87.638	Maylandia_zebra
ENSORLG00015020608	LARP4B	94	82.548	ENSMZEG00005014594	-	100	82.825	Maylandia_zebra
ENSORLG00015020608	LARP4B	100	56.391	ENSMGAG00000005472	LARP4B	100	55.764	Meleagris_gallopavo
ENSORLG00015020608	LARP4B	100	54.071	ENSMAUG00000021657	Larp4b	100	53.944	Mesocricetus_auratus
ENSORLG00015020608	LARP4B	100	55.305	ENSMICG00000001301	LARP4B	100	55.585	Microcebus_murinus
ENSORLG00015020608	LARP4B	73	59.729	ENSMOCG00000021452	Larp4b	100	59.560	Microtus_ochrogaster
ENSORLG00015020608	LARP4B	86	93.103	ENSMMOG00000011253	-	100	68.201	Mola_mola
ENSORLG00015020608	LARP4B	100	56.041	ENSMODG00000005957	LARP4B	100	55.913	Monodelphis_domestica
ENSORLG00015020608	LARP4B	100	68.803	ENSMALG00000012432	LARP4B	100	68.803	Monopterus_albus
ENSORLG00015020608	LARP4B	100	55.025	MGP_CAROLIEiJ_G0018216	Larp4b	100	60.764	Mus_caroli
ENSORLG00015020608	LARP4B	100	55.250	ENSMUSG00000033499	Larp4b	100	60.575	Mus_musculus
ENSORLG00015020608	LARP4B	100	54.819	MGP_PahariEiJ_G0019266	Larp4b	100	60.590	Mus_pahari
ENSORLG00015020608	LARP4B	100	55.125	MGP_SPRETEiJ_G0019074	Larp4b	100	60.575	Mus_spretus
ENSORLG00015020608	LARP4B	91	55.983	ENSMPUG00000016220	LARP4B	97	54.282	Mustela_putorius_furo
ENSORLG00015020608	LARP4B	88	56.047	ENSMLUG00000005880	LARP4B	99	53.719	Myotis_lucifugus
ENSORLG00015020608	LARP4B	100	55.025	ENSNGAG00000001750	Larp4b	100	54.899	Nannospalax_galili
ENSORLG00015020608	LARP4B	100	66.436	ENSNBRG00000020018	LARP4B	100	66.436	Neolamprologus_brichardi
ENSORLG00015020608	LARP4B	100	54.580	ENSNLEG00000013442	LARP4B	100	54.454	Nomascus_leucogenys
ENSORLG00015020608	LARP4B	84	46.388	ENSMEUG00000013114	-	83	46.388	Notamacropus_eugenii
ENSORLG00015020608	LARP4B	100	52.559	ENSOPRG00000003300	LARP4B	100	52.025	Ochotona_princeps
ENSORLG00015020608	LARP4B	100	50.754	ENSODEG00000001109	LARP4B	100	50.628	Octodon_degus
ENSORLG00015020608	LARP4B	100	82.946	ENSONIG00000017705	LARP4B	100	83.204	Oreochromis_niloticus
ENSORLG00015020608	LARP4B	100	54.759	ENSOANG00000006100	LARP4B	100	54.579	Ornithorhynchus_anatinus
ENSORLG00015020608	LARP4B	100	52.503	ENSOCUG00000004950	LARP4B	97	52.381	Oryctolagus_cuniculus
ENSORLG00015020608	LARP4B	100	98.684	ENSORLG00000006080	LARP4B	100	98.684	Oryzias_latipes
ENSORLG00015020608	LARP4B	100	98.578	ENSORLG00020020940	LARP4B	100	98.578	Oryzias_latipes_hni
ENSORLG00015020608	LARP4B	100	93.590	ENSOMEG00000019619	LARP4B	100	93.875	Oryzias_melastigma
ENSORLG00015020608	LARP4B	96	54.508	ENSOGAG00000011540	LARP4B	99	54.372	Otolemur_garnettii
ENSORLG00015020608	LARP4B	97	54.058	ENSOARG00000015320	LARP4B	96	53.665	Ovis_aries
ENSORLG00015020608	LARP4B	100	54.847	ENSPPAG00000039232	LARP4B	100	54.719	Pan_paniscus
ENSORLG00015020608	LARP4B	91	56.379	ENSPPRG00000009489	LARP4B	100	54.340	Panthera_pardus
ENSORLG00015020608	LARP4B	91	56.379	ENSPTIG00000008543	LARP4B	100	54.340	Panthera_tigris_altaica
ENSORLG00015020608	LARP4B	100	54.847	ENSPTRG00000002235	LARP4B	100	54.719	Pan_troglodytes
ENSORLG00015020608	LARP4B	100	55.082	ENSPANG00000023546	LARP4B	100	53.074	Papio_anubis
ENSORLG00015020608	LARP4B	98	58.235	ENSPKIG00000012368	LARP4B	96	58.800	Paramormyrops_kingsleyae
ENSORLG00015020608	LARP4B	72	68.750	ENSPSIG00000005600	LARP4B	99	68.125	Pelodiscus_sinensis
ENSORLG00015020608	LARP4B	85	74.542	ENSPMGG00000008261	LARP4B	87	74.359	Periophthalmus_magnuspinnatus
ENSORLG00015020608	LARP4B	100	53.954	ENSPEMG00000014052	Larp4b	100	53.827	Peromyscus_maniculatus_bairdii
ENSORLG00015020608	LARP4B	100	81.453	ENSPFOG00000000029	LARP4B	100	81.453	Poecilia_formosa
ENSORLG00015020608	LARP4B	100	81.712	ENSPLAG00000002871	LARP4B	100	81.712	Poecilia_latipinna
ENSORLG00015020608	LARP4B	100	82.353	ENSPMEG00000016361	LARP4B	100	82.353	Poecilia_mexicana
ENSORLG00015020608	LARP4B	100	54.774	ENSPPYG00000002035	LARP4B	97	54.648	Pongo_abelii
ENSORLG00015020608	LARP4B	100	54.030	ENSPCOG00000014688	LARP4B	100	53.904	Propithecus_coquereli
ENSORLG00015020608	LARP4B	88	53.956	ENSPVAG00000009784	LARP4B	82	53.797	Pteropus_vampyrus
ENSORLG00015020608	LARP4B	100	83.799	ENSPNYG00000024252	LARP4B	100	84.078	Pundamilia_nyererei
ENSORLG00015020608	LARP4B	94	53.159	ENSPNAG00000028956	larp4b	96	53.022	Pygocentrus_nattereri
ENSORLG00015020608	LARP4B	99	54.477	ENSRNOG00000015888	Larp4b	100	54.351	Rattus_norvegicus
ENSORLG00015020608	LARP4B	100	55.207	ENSRBIG00000033294	LARP4B	100	55.082	Rhinopithecus_bieti
ENSORLG00015020608	LARP4B	100	55.332	ENSRROG00000033879	LARP4B	100	55.230	Rhinopithecus_roxellana
ENSORLG00015020608	LARP4B	100	49.623	ENSSBOG00000021109	LARP4B	100	49.497	Saimiri_boliviensis_boliviensis
ENSORLG00015020608	LARP4B	100	56.611	ENSSHAG00000013392	LARP4B	100	56.978	Sarcophilus_harrisii
ENSORLG00015020608	LARP4B	93	59.808	ENSSFOG00015003256	LARP4B	93	58.142	Scleropages_formosus
ENSORLG00015020608	LARP4B	100	71.035	ENSSMAG00000005982	-	100	75.602	Scophthalmus_maximus
ENSORLG00015020608	LARP4B	100	85.493	ENSSDUG00000006704	LARP4B	100	85.493	Seriola_dumerili
ENSORLG00015020608	LARP4B	100	73.501	ENSSLDG00000020660	LARP4B	97	80.000	Seriola_lalandi_dorsalis
ENSORLG00015020608	LARP4B	70	87.755	ENSSARG00000001243	-	77	87.755	Sorex_araneus
ENSORLG00015020608	LARP4B	100	61.806	ENSSPUG00000002102	-	100	62.151	Sphenodon_punctatus
ENSORLG00015020608	LARP4B	100	59.059	ENSSPUG00000013734	-	100	59.583	Sphenodon_punctatus
ENSORLG00015020608	LARP4B	86	89.655	ENSSPAG00000014628	LARP4B	92	89.655	Stegastes_partitus
ENSORLG00015020608	LARP4B	100	55.000	ENSSSCG00000011162	LARP4B	97	60.134	Sus_scrofa
ENSORLG00015020608	LARP4B	100	58.036	ENSTGUG00000000811	-	100	57.653	Taeniopygia_guttata
ENSORLG00015020608	LARP4B	100	67.350	ENSTNIG00000004571	-	98	67.734	Tetraodon_nigroviridis
ENSORLG00015020608	LARP4B	99	65.938	ENSTNIG00000007991	LARP4B	100	71.667	Tetraodon_nigroviridis
ENSORLG00015020608	LARP4B	77	57.935	ENSTTRG00000011151	LARP4B	87	58.882	Tursiops_truncatus
ENSORLG00015020608	LARP4B	86	56.831	ENSUAMG00000016461	LARP4B	95	56.686	Ursus_americanus
ENSORLG00015020608	LARP4B	91	56.164	ENSUMAG00000016127	LARP4B	100	54.203	Ursus_maritimus
ENSORLG00015020608	LARP4B	91	56.044	ENSVVUG00000008641	LARP4B	100	54.088	Vulpes_vulpes
ENSORLG00015020608	LARP4B	99	58.376	ENSXETG00000016882	larp4b	100	58.634	Xenopus_tropicalis
ENSORLG00015020608	LARP4B	100	70.470	ENSXCOG00000019952	LARP4B	100	70.470	Xiphophorus_couchianus
ENSORLG00015020608	LARP4B	100	82.394	ENSXMAG00000021533	LARP4B	100	81.972	Xiphophorus_maculatus