EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015020619 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 38465 bases
Position: chr21:4718659-4757123
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015034544	RNase_Zc3h12a	PF11977.8	3.1e-64	1	1
ENSORLP00015019513	RNase_Zc3h12a	PF11977.8	4.1e-64	1	1
ENSORLP00015034560	RNase_Zc3h12a	PF11977.8	4.1e-64	1	1
ENSORLP00015034549	RNase_Zc3h12a	PF11977.8	7.9e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015035618	-	5084	-	ENSORLP00015034560	884 (aa)	-	-
ENSORLT00015035603	-	2223	-	ENSORLP00015034544	740 (aa)	-	-
ENSORLT00015028445	-	804	-	ENSORLP00015034549	267 (aa)	-	-
ENSORLT00015028472	-	5264	-	ENSORLP00015019513	884 (aa)	-	-

Gene Model

Click here to download ENSORLG00015020619's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015020619's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015020619	-	87	69.038	ENSORLG00015004818	zc3h12b	59	69.325
ENSORLG00015020619	-	87	76.496	ENSORLG00015015211	-	99	43.295
ENSORLG00015020619	-	86	56.118	ENSORLG00015007634	ZC3H12A	53	56.748

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015020619	-	87	68.966	ENSG00000102053	ZC3H12B	71	56.180	Homo_sapiens
ENSORLG00015020619	-	87	71.121	ENSAPOG00000001738	zc3h12b	58	71.473	Acanthochromis_polyacanthus
ENSORLG00015020619	-	56	77.632	ENSAMEG00000006955	ZC3H12B	63	77.632	Ailuropoda_melanoleuca
ENSORLG00015020619	-	97	78.764	ENSACIG00000005689	-	74	83.404	Amphilophus_citrinellus
ENSORLG00015020619	-	96	66.275	ENSACIG00000009787	zc3h12b	61	70.679	Amphilophus_citrinellus
ENSORLG00015020619	-	87	70.690	ENSAOCG00000010094	zc3h12b	60	71.429	Amphiprion_ocellaris
ENSORLG00015020619	-	87	70.690	ENSAPEG00000007479	zc3h12b	58	71.787	Amphiprion_percula
ENSORLG00015020619	-	90	69.167	ENSATEG00000011175	zc3h12b	58	71.160	Anabas_testudineus
ENSORLG00015020619	-	87	68.966	ENSAPLG00000003874	ZC3H12B	99	73.064	Anas_platyrhynchos
ENSORLG00015020619	-	87	68.966	ENSACAG00000013582	ZC3H12B	59	67.359	Anolis_carolinensis
ENSORLG00015020619	-	87	68.534	ENSANAG00000010296	ZC3H12B	71	55.730	Aotus_nancymaae
ENSORLG00015020619	-	95	66.797	ENSACLG00000007669	zc3h12b	59	73.397	Astatotilapia_calliptera
ENSORLG00015020619	-	87	70.085	ENSAMXG00000011328	zc3h12b	53	69.048	Astyanax_mexicanus
ENSORLG00015020619	-	97	63.707	ENSAMXG00000038308	-	89	50.000	Astyanax_mexicanus
ENSORLG00015020619	-	97	67.568	ENSAMXG00000005320	-	89	49.752	Astyanax_mexicanus
ENSORLG00015020619	-	87	69.828	ENSBTAG00000002206	ZC3H12B	55	71.753	Bos_taurus
ENSORLG00015020619	-	87	68.966	ENSCJAG00000001427	ZC3H12B	58	66.766	Callithrix_jacchus
ENSORLG00015020619	-	87	68.966	ENSCAFG00000031307	ZC3H12B	58	69.231	Canis_familiaris
ENSORLG00015020619	-	87	68.966	ENSCAFG00020017995	ZC3H12B	58	69.231	Canis_lupus_dingo
ENSORLG00015020619	-	87	68.966	ENSTSYG00000011302	ZC3H12B	55	71.753	Carlito_syrichta
ENSORLG00015020619	-	87	68.534	ENSCCAG00000030171	ZC3H12B	71	55.730	Cebus_capucinus
ENSORLG00015020619	-	87	68.966	ENSCATG00000044845	ZC3H12B	71	56.180	Cercocebus_atys
ENSORLG00015020619	-	87	68.966	ENSCLAG00000003600	ZC3H12B	65	60.050	Chinchilla_lanigera
ENSORLG00015020619	-	87	69.828	ENSCSAG00000011955	-	95	54.518	Chlorocebus_sabaeus
ENSORLG00015020619	-	87	69.828	ENSCPBG00000006983	ZC3H12B	62	72.063	Chrysemys_picta_bellii
ENSORLG00015020619	-	87	68.966	ENSCANG00000006746	ZC3H12B	71	55.955	Colobus_angolensis_palliatus
ENSORLG00015020619	-	87	68.966	ENSCGRG00001018643	Zc3h12b	51	73.179	Cricetulus_griseus_chok1gshd
ENSORLG00015020619	-	87	68.966	ENSCGRG00000015623	Zc3h12b	51	73.179	Cricetulus_griseus_crigri
ENSORLG00015020619	-	90	69.835	ENSCSEG00000013686	zc3h12b	60	73.418	Cynoglossus_semilaevis
ENSORLG00015020619	-	87	70.690	ENSCVAG00000010473	zc3h12b	59	72.063	Cyprinodon_variegatus
ENSORLG00015020619	-	87	68.511	ENSDARG00000062463	zc3h12b	63	69.419	Danio_rerio
ENSORLG00015020619	-	87	68.966	ENSDNOG00000038439	ZC3H12B	63	67.976	Dasypus_novemcinctus
ENSORLG00015020619	-	87	68.534	ENSDORG00000024832	Zc3h12b	63	71.104	Dipodomys_ordii
ENSORLG00015020619	-	58	64.000	ENSETEG00000012095	ZC3H12B	52	64.257	Echinops_telfairi
ENSORLG00015020619	-	86	57.205	ENSEASG00005006995	ZC3H12B	66	51.970	Equus_asinus_asinus
ENSORLG00015020619	-	96	60.777	ENSECAG00000020993	ZC3H12B	95	53.731	Equus_caballus
ENSORLG00015020619	-	87	69.397	ENSELUG00000010689	zc3h12b	50	71.609	Esox_lucius
ENSORLG00015020619	-	87	70.259	ENSFCAG00000032299	ZC3H12B	59	66.172	Felis_catus
ENSORLG00015020619	-	87	69.397	ENSFALG00000004293	ZC3H12B	69	73.171	Ficedula_albicollis
ENSORLG00015020619	-	87	68.534	ENSFDAG00000014258	ZC3H12B	51	72.517	Fukomys_damarensis
ENSORLG00015020619	-	99	76.894	ENSFHEG00000014717	-	95	82.958	Fundulus_heteroclitus
ENSORLG00015020619	-	96	65.637	ENSFHEG00000002391	zc3h12b	57	72.843	Fundulus_heteroclitus
ENSORLG00015020619	-	87	68.966	ENSGALG00000039391	ZC3H12B	60	71.795	Gallus_gallus
ENSORLG00015020619	-	99	76.136	ENSGAFG00000004701	-	99	57.314	Gambusia_affinis
ENSORLG00015020619	-	87	70.259	ENSGAFG00000006871	zc3h12b	60	70.393	Gambusia_affinis
ENSORLG00015020619	-	53	90.071	ENSGACG00000020334	zc3h12b	51	82.845	Gasterosteus_aculeatus
ENSORLG00015020619	-	87	70.259	ENSGAGG00000005569	ZC3H12B	62	72.381	Gopherus_agassizii
ENSORLG00015020619	-	87	68.966	ENSGGOG00000024638	ZC3H12B	71	56.180	Gorilla_gorilla
ENSORLG00015020619	-	87	83.262	ENSHBUG00000003376	-	91	70.130	Haplochromis_burtoni
ENSORLG00015020619	-	87	68.103	ENSHGLG00000003107	ZC3H12B	68	56.250	Heterocephalus_glaber_female
ENSORLG00015020619	-	87	68.103	ENSHGLG00100010721	ZC3H12B	68	56.250	Heterocephalus_glaber_male
ENSORLG00015020619	-	87	67.782	ENSHCOG00000008487	zc3h12b	60	69.113	Hippocampus_comes
ENSORLG00015020619	-	88	74.262	ENSHCOG00000017425	-	89	71.429	Hippocampus_comes
ENSORLG00015020619	-	97	72.201	ENSIPUG00000014830	-	87	48.052	Ictalurus_punctatus
ENSORLG00015020619	-	90	69.106	ENSIPUG00000016745	zc3h12b	55	67.246	Ictalurus_punctatus
ENSORLG00015020619	-	87	68.103	ENSSTOG00000020962	ZC3H12B	69	56.532	Ictidomys_tridecemlineatus
ENSORLG00015020619	-	87	68.103	ENSJJAG00000015755	Zc3h12b	60	70.199	Jaculus_jaculus
ENSORLG00015020619	-	87	71.552	ENSKMAG00000004921	zc3h12b	60	69.091	Kryptolebias_marmoratus
ENSORLG00015020619	-	90	66.802	ENSLBEG00000006448	zc3h12b	53	71.473	Labrus_bergylta
ENSORLG00015020619	-	87	69.828	ENSLACG00000014526	ZC3H12B	62	69.091	Latimeria_chalumnae
ENSORLG00015020619	-	88	69.658	ENSLOCG00000014631	zc3h12b	55	70.393	Lepisosteus_oculatus
ENSORLG00015020619	-	90	75.620	ENSLOCG00000010717	-	97	44.480	Lepisosteus_oculatus
ENSORLG00015020619	-	87	69.828	ENSLAFG00000014891	ZC3H12B	65	67.665	Loxodonta_africana
ENSORLG00015020619	-	87	68.966	ENSMFAG00000042237	ZC3H12B	71	56.180	Macaca_fascicularis
ENSORLG00015020619	-	87	68.966	ENSMMUG00000012261	ZC3H12B	71	56.180	Macaca_mulatta
ENSORLG00015020619	-	87	68.966	ENSMNEG00000043003	ZC3H12B	71	56.180	Macaca_nemestrina
ENSORLG00015020619	-	87	68.966	ENSMLEG00000042630	ZC3H12B	71	56.180	Mandrillus_leucophaeus
ENSORLG00015020619	-	87	70.259	ENSMAMG00000011770	zc3h12b	59	72.468	Mastacembelus_armatus
ENSORLG00015020619	-	95	66.797	ENSMZEG00005007548	zc3h12b	59	73.397	Maylandia_zebra
ENSORLG00015020619	-	87	68.966	ENSMGAG00000000759	ZC3H12B	59	72.115	Meleagris_gallopavo
ENSORLG00015020619	-	87	69.397	ENSMAUG00000017800	Zc3h12b	51	73.510	Mesocricetus_auratus
ENSORLG00015020619	-	87	68.966	ENSMICG00000010697	ZC3H12B	71	57.373	Microcebus_murinus
ENSORLG00015020619	-	87	69.397	ENSMOCG00000000094	Zc3h12b	60	73.510	Microtus_ochrogaster
ENSORLG00015020619	-	89	69.198	ENSMMOG00000008734	zc3h12b	61	71.254	Mola_mola
ENSORLG00015020619	-	95	65.000	ENSMODG00000005206	ZC3H12B	66	66.205	Monodelphis_domestica
ENSORLG00015020619	-	79	66.667	ENSMALG00000021153	zc3h12b	62	64.198	Monopterus_albus
ENSORLG00015020619	-	97	77.606	ENSMALG00000016807	-	99	60.305	Monopterus_albus
ENSORLG00015020619	-	87	68.534	ENSMUSG00000035045	Zc3h12b	66	82.857	Mus_musculus
ENSORLG00015020619	-	87	67.949	MGP_PahariEiJ_G0031787	Zc3h12b	63	68.000	Mus_pahari
ENSORLG00015020619	-	87	68.534	MGP_SPRETEiJ_G0034413	Zc3h12b	60	72.185	Mus_spretus
ENSORLG00015020619	-	87	67.672	ENSMPUG00000001162	ZC3H12B	57	67.069	Mustela_putorius_furo
ENSORLG00015020619	-	87	69.828	ENSMLUG00000013635	ZC3H12B	60	67.359	Myotis_lucifugus
ENSORLG00015020619	-	87	68.966	ENSNLEG00000000383	ZC3H12B	71	56.180	Nomascus_leucogenys
ENSORLG00015020619	-	65	75.686	ENSMEUG00000014075	ZC3H12B	61	75.686	Notamacropus_eugenii
ENSORLG00015020619	-	87	70.259	ENSONIG00000012867	zc3h12b	60	72.843	Oreochromis_niloticus
ENSORLG00015020619	-	87	67.811	ENSOCUG00000006130	ZC3H12B	54	76.285	Oryctolagus_cuniculus
ENSORLG00015020619	-	100	98.077	ENSORLG00000009188	-	100	98.077	Oryzias_latipes
ENSORLG00015020619	-	88	68.465	ENSORLG00000009556	zc3h12b	60	69.018	Oryzias_latipes
ENSORLG00015020619	-	100	97.624	ENSORLG00020019033	-	100	97.624	Oryzias_latipes_hni
ENSORLG00015020619	-	87	67.782	ENSORLG00020021793	zc3h12b	59	69.018	Oryzias_latipes_hni
ENSORLG00015020619	-	87	69.038	ENSOMEG00000005768	zc3h12b	59	71.787	Oryzias_melastigma
ENSORLG00015020619	-	98	93.487	ENSOMEG00000018642	-	100	85.050	Oryzias_melastigma
ENSORLG00015020619	-	87	68.534	ENSOGAG00000029439	ZC3H12B	66	57.143	Otolemur_garnettii
ENSORLG00015020619	-	87	69.397	ENSOARG00000004959	ZC3H12B	55	71.290	Ovis_aries
ENSORLG00015020619	-	87	68.966	ENSPPAG00000039530	ZC3H12B	71	56.180	Pan_paniscus
ENSORLG00015020619	-	56	75.536	ENSPPRG00000004966	-	60	75.536	Panthera_pardus
ENSORLG00015020619	-	56	77.093	ENSPTIG00000005571	ZC3H12B	63	77.093	Panthera_tigris_altaica
ENSORLG00015020619	-	87	68.966	ENSPTRG00000021969	ZC3H12B	71	56.180	Pan_troglodytes
ENSORLG00015020619	-	87	68.966	ENSPANG00000007944	ZC3H12B	71	56.180	Papio_anubis
ENSORLG00015020619	-	86	71.304	ENSPKIG00000012946	zc3h12b	59	72.026	Paramormyrops_kingsleyae
ENSORLG00015020619	-	89	77.311	ENSPKIG00000012595	-	62	57.560	Paramormyrops_kingsleyae
ENSORLG00015020619	-	87	69.528	ENSPKIG00000019893	ZC3H12B	59	69.322	Paramormyrops_kingsleyae
ENSORLG00015020619	-	87	70.690	ENSPSIG00000016853	ZC3H12B	62	72.063	Pelodiscus_sinensis
ENSORLG00015020619	-	87	69.828	ENSPMGG00000006009	zc3h12b	62	68.343	Periophthalmus_magnuspinnatus
ENSORLG00015020619	-	95	64.093	ENSPCIG00000020264	ZC3H12B	61	69.375	Phascolarctos_cinereus
ENSORLG00015020619	-	87	67.782	ENSPFOG00000019365	zc3h12b	59	70.807	Poecilia_formosa
ENSORLG00015020619	-	87	70.259	ENSPLAG00000011981	zc3h12b	56	71.160	Poecilia_latipinna
ENSORLG00015020619	-	93	78.378	ENSPLAG00000011687	-	85	78.378	Poecilia_latipinna
ENSORLG00015020619	-	87	57.322	ENSPMEG00000002552	zc3h12b	57	63.323	Poecilia_mexicana
ENSORLG00015020619	-	87	70.259	ENSPREG00000020794	zc3h12b	59	70.497	Poecilia_reticulata
ENSORLG00015020619	-	54	86.207	ENSPPYG00000020416	ZC3H12B	54	76.587	Pongo_abelii
ENSORLG00015020619	-	57	84.768	ENSPCAG00000016422	ZC3H12B	51	84.375	Procavia_capensis
ENSORLG00015020619	-	87	68.966	ENSPCOG00000020467	ZC3H12B	60	66.765	Propithecus_coquereli
ENSORLG00015020619	-	59	60.870	ENSPVAG00000017352	ZC3H12B	54	60.870	Pteropus_vampyrus
ENSORLG00015020619	-	97	78.764	ENSPNYG00000007151	-	96	82.692	Pundamilia_nyererei
ENSORLG00015020619	-	95	66.797	ENSPNYG00000018012	zc3h12b	59	73.397	Pundamilia_nyererei
ENSORLG00015020619	-	87	73.840	ENSPNYG00000015874	-	78	74.569	Pundamilia_nyererei
ENSORLG00015020619	-	97	65.000	ENSPNAG00000002567	zc3h12b	62	68.657	Pygocentrus_nattereri
ENSORLG00015020619	-	94	75.299	ENSPNAG00000017483	-	89	55.760	Pygocentrus_nattereri
ENSORLG00015020619	-	87	68.966	ENSRNOG00000011508	Zc3h12b	68	68.103	Rattus_norvegicus
ENSORLG00015020619	-	87	68.966	ENSRBIG00000036402	ZC3H12B	70	56.180	Rhinopithecus_bieti
ENSORLG00015020619	-	87	68.966	ENSRROG00000036004	ZC3H12B	70	56.180	Rhinopithecus_roxellana
ENSORLG00015020619	-	87	68.534	ENSSBOG00000004095	ZC3H12B	71	55.730	Saimiri_boliviensis_boliviensis
ENSORLG00015020619	-	92	65.992	ENSSHAG00000006530	ZC3H12B	61	71.019	Sarcophilus_harrisii
ENSORLG00015020619	-	87	68.803	ENSSFOG00015008769	zc3h12b	64	67.055	Scleropages_formosus
ENSORLG00015020619	-	96	64.706	ENSSMAG00000018309	zc3h12b	59	68.807	Scophthalmus_maximus
ENSORLG00015020619	-	99	65.038	ENSSDUG00000014078	zc3h12b	93	63.273	Seriola_dumerili
ENSORLG00015020619	-	96	65.882	ENSSLDG00000018895	zc3h12b	59	71.340	Seriola_lalandi_dorsalis
ENSORLG00015020619	-	87	70.259	ENSSPAG00000022460	zc3h12b	60	71.118	Stegastes_partitus
ENSORLG00015020619	-	87	68.966	ENSSSCG00000012367	ZC3H12B	55	73.179	Sus_scrofa
ENSORLG00015020619	-	87	69.828	ENSTGUG00000002846	ZC3H12B	87	42.397	Taeniopygia_guttata
ENSORLG00015020619	-	87	67.811	ENSTRUG00000012186	zc3h12b	63	70.064	Takifugu_rubripes
ENSORLG00015020619	-	89	79.412	ENSTRUG00000015402	-	94	76.771	Takifugu_rubripes
ENSORLG00015020619	-	60	84.279	ENSTNIG00000011828	zc3h12b	55	84.279	Tetraodon_nigroviridis
ENSORLG00015020619	-	87	68.966	ENSUAMG00000005098	ZC3H12B	58	69.231	Ursus_americanus
ENSORLG00015020619	-	87	68.966	ENSUMAG00000017054	ZC3H12B	58	69.231	Ursus_maritimus
ENSORLG00015020619	-	58	80.625	ENSVPAG00000009070	ZC3H12B	55	69.732	Vicugna_pacos
ENSORLG00015020619	-	87	68.966	ENSVVUG00000022686	ZC3H12B	56	72.848	Vulpes_vulpes
ENSORLG00015020619	-	87	56.466	ENSXETG00000017794	zc3h12b	66	53.535	Xenopus_tropicalis
ENSORLG00015020619	-	99	76.515	ENSXCOG00000007996	-	86	82.008	Xiphophorus_couchianus
ENSORLG00015020619	-	92	66.275	ENSXCOG00000006151	zc3h12b	60	72.436	Xiphophorus_couchianus
ENSORLG00015020619	-	87	70.259	ENSXMAG00000018548	zc3h12b	59	70.807	Xiphophorus_maculatus