EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015021040 (Gene tree)
Gene ID: -
Gene Symbol: shq1
Alias: -
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 41865 bases
Position: chr5:23214675-23256539
Accession: ZDB-GENE-070112-1412
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015019931	SHQ1	PF04925.15	6.3e-65	1	1
ENSORLP00015019952	SHQ1	PF04925.15	7.7e-65	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015035798	-	5533	-	ENSORLP00015019952	610 (aa)	-	-
ENSORLT00015029011	-	5117	-	ENSORLP00015019931	548 (aa)	-	-

Gene Model

Click here to download ENSORLG00015021040's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015021040's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015021040	shq1	74	60.241	ENSG00000144736	SHQ1	96	70.833	Homo_sapiens
ENSORLG00015021040	shq1	98	64.500	ENSAPOG00000000397	shq1	98	65.500	Acanthochromis_polyacanthus
ENSORLG00015021040	shq1	78	58.352	ENSAMEG00000015140	SHQ1	71	59.854	Ailuropoda_melanoleuca
ENSORLG00015021040	shq1	99	64.489	ENSACIG00000021249	shq1	99	65.662	Amphilophus_citrinellus
ENSORLG00015021040	shq1	99	63.262	ENSAOCG00000023311	shq1	99	64.745	Amphiprion_ocellaris
ENSORLG00015021040	shq1	99	64.120	ENSAPEG00000021686	shq1	99	64.286	Amphiprion_percula
ENSORLG00015021040	shq1	92	68.657	ENSATEG00000008475	shq1	89	69.030	Anabas_testudineus
ENSORLG00015021040	shq1	79	57.207	ENSAPLG00000013926	SHQ1	85	57.737	Anas_platyrhynchos
ENSORLG00015021040	shq1	77	58.605	ENSACAG00000014809	SHQ1	64	59.584	Anolis_carolinensis
ENSORLG00015021040	shq1	84	41.595	ENSANAG00000030500	-	72	42.993	Aotus_nancymaae
ENSORLG00015021040	shq1	85	55.285	ENSANAG00000029241	SHQ1	85	54.675	Aotus_nancymaae
ENSORLG00015021040	shq1	99	63.987	ENSACLG00000023077	shq1	99	61.661	Astatotilapia_calliptera
ENSORLG00015021040	shq1	77	64.319	ENSAMXG00000043822	shq1	74	64.319	Astyanax_mexicanus
ENSORLG00015021040	shq1	80	59.465	ENSBTAG00000005436	SHQ1	74	58.430	Bos_taurus
ENSORLG00015021040	shq1	74	59.036	ENSCJAG00000015131	SHQ1	74	59.028	Callithrix_jacchus
ENSORLG00015021040	shq1	71	59.296	ENSCAFG00000006434	SHQ1	74	59.491	Canis_familiaris
ENSORLG00015021040	shq1	71	59.548	ENSCAFG00020016743	SHQ1	74	59.722	Canis_lupus_dingo
ENSORLG00015021040	shq1	80	58.613	ENSCHIG00000012271	SHQ1	71	59.513	Capra_hircus
ENSORLG00015021040	shq1	74	55.932	ENSTSYG00000014439	SHQ1	75	57.209	Carlito_syrichta
ENSORLG00015021040	shq1	87	46.185	ENSCAPG00000009343	SHQ1	61	64.474	Cavia_aperea
ENSORLG00015021040	shq1	79	58.957	ENSCPOG00000011443	SHQ1	74	59.954	Cavia_porcellus
ENSORLG00015021040	shq1	83	43.656	ENSCCAG00000036087	-	73	45.024	Cebus_capucinus
ENSORLG00015021040	shq1	74	50.843	ENSCCAG00000027080	SHQ1	73	51.157	Cebus_capucinus
ENSORLG00015021040	shq1	74	60.241	ENSCATG00000041238	SHQ1	74	60.185	Cercocebus_atys
ENSORLG00015021040	shq1	78	60.092	ENSCLAG00000004206	SHQ1	75	60.880	Chinchilla_lanigera
ENSORLG00015021040	shq1	58	58.589	ENSCSAG00000011514	SHQ1	70	58.601	Chlorocebus_sabaeus
ENSORLG00015021040	shq1	51	65.000	ENSCHOG00000003273	-	84	65.000	Choloepus_hoffmanni
ENSORLG00015021040	shq1	78	60.592	ENSCPBG00000006441	SHQ1	70	60.508	Chrysemys_picta_bellii
ENSORLG00015021040	shq1	71	39.750	ENSCING00000008013	-	85	39.750	Ciona_intestinalis
ENSORLG00015021040	shq1	71	40.153	ENSCSAVG00000002332	-	97	39.860	Ciona_savignyi
ENSORLG00015021040	shq1	74	60.723	ENSCANG00000039295	SHQ1	75	60.648	Colobus_angolensis_palliatus
ENSORLG00015021040	shq1	86	56.576	ENSCGRG00001012583	Shq1	76	60.185	Cricetulus_griseus_chok1gshd
ENSORLG00015021040	shq1	86	56.576	ENSCGRG00000009849	Shq1	76	60.185	Cricetulus_griseus_crigri
ENSORLG00015021040	shq1	75	75.854	ENSCSEG00000007829	shq1	88	65.751	Cynoglossus_semilaevis
ENSORLG00015021040	shq1	98	66.087	ENSCVAG00000020049	shq1	99	66.957	Cyprinodon_variegatus
ENSORLG00015021040	shq1	78	67.209	ENSDARG00000058522	shq1	72	67.529	Danio_rerio
ENSORLG00015021040	shq1	78	59.039	ENSDNOG00000033937	SHQ1	92	52.876	Dasypus_novemcinctus
ENSORLG00015021040	shq1	74	51.807	ENSETEG00000005766	SHQ1	75	52.083	Echinops_telfairi
ENSORLG00015021040	shq1	65	47.425	ENSEBUG00000005445	shq1	73	50.000	Eptatretus_burgeri
ENSORLG00015021040	shq1	78	59.268	ENSEASG00005002237	SHQ1	75	60.185	Equus_asinus_asinus
ENSORLG00015021040	shq1	78	60.780	ENSECAG00000015673	SHQ1	73	60.648	Equus_caballus
ENSORLG00015021040	shq1	79	59.729	ENSEEUG00000010568	SHQ1	75	60.648	Erinaceus_europaeus
ENSORLG00015021040	shq1	74	71.499	ENSELUG00000003476	shq1	81	68.421	Esox_lucius
ENSORLG00015021040	shq1	74	59.759	ENSFCAG00000012781	SHQ1	75	59.722	Felis_catus
ENSORLG00015021040	shq1	75	61.098	ENSFALG00000013428	SHQ1	70	61.201	Ficedula_albicollis
ENSORLG00015021040	shq1	74	59.759	ENSFDAG00000005595	SHQ1	66	59.722	Fukomys_damarensis
ENSORLG00015021040	shq1	96	67.621	ENSFHEG00000017552	shq1	99	65.641	Fundulus_heteroclitus
ENSORLG00015021040	shq1	71	73.454	ENSGMOG00000007350	shq1	100	73.454	Gadus_morhua
ENSORLG00015021040	shq1	80	59.101	ENSGALG00000007798	SHQ1	70	59.954	Gallus_gallus
ENSORLG00015021040	shq1	71	76.804	ENSGACG00000011797	shq1	100	76.804	Gasterosteus_aculeatus
ENSORLG00015021040	shq1	74	59.759	ENSGGOG00000034818	SHQ1	74	59.722	Gorilla_gorilla
ENSORLG00015021040	shq1	99	64.094	ENSHBUG00000010857	shq1	99	64.597	Haplochromis_burtoni
ENSORLG00015021040	shq1	80	57.848	ENSHGLG00000003637	SHQ1	67	59.122	Heterocephalus_glaber_female
ENSORLG00015021040	shq1	80	57.848	ENSHGLG00100011957	SHQ1	67	59.122	Heterocephalus_glaber_male
ENSORLG00015021040	shq1	95	64.337	ENSHCOG00000010799	shq1	95	64.337	Hippocampus_comes
ENSORLG00015021040	shq1	80	65.000	ENSIPUG00000001247	shq1	74	66.511	Ictalurus_punctatus
ENSORLG00015021040	shq1	79	57.919	ENSSTOG00000010043	SHQ1	79	58.333	Ictidomys_tridecemlineatus
ENSORLG00015021040	shq1	78	59.954	ENSJJAG00000017611	Shq1	76	60.046	Jaculus_jaculus
ENSORLG00015021040	shq1	92	69.847	ENSKMAG00000004457	shq1	99	66.041	Kryptolebias_marmoratus
ENSORLG00015021040	shq1	79	61.659	ENSLACG00000014243	SHQ1	65	62.269	Latimeria_chalumnae
ENSORLG00015021040	shq1	79	67.489	ENSLOCG00000009970	shq1	75	67.277	Lepisosteus_oculatus
ENSORLG00015021040	shq1	74	41.422	ENSMFAG00000037396	-	72	42.118	Macaca_fascicularis
ENSORLG00015021040	shq1	74	60.241	ENSMFAG00000039148	SHQ1	74	60.185	Macaca_fascicularis
ENSORLG00015021040	shq1	65	58.856	ENSMMUG00000009571	SHQ1	69	58.854	Macaca_mulatta
ENSORLG00015021040	shq1	78	42.424	ENSMMUG00000021761	-	72	42.118	Macaca_mulatta
ENSORLG00015021040	shq1	74	60.241	ENSMNEG00000032667	SHQ1	74	60.185	Macaca_nemestrina
ENSORLG00015021040	shq1	74	59.759	ENSMLEG00000038493	SHQ1	74	59.722	Mandrillus_leucophaeus
ENSORLG00015021040	shq1	99	62.338	ENSMAMG00000023432	shq1	96	61.477	Mastacembelus_armatus
ENSORLG00015021040	shq1	99	64.262	ENSMZEG00005008649	shq1	99	64.765	Maylandia_zebra
ENSORLG00015021040	shq1	80	59.417	ENSMGAG00000009640	SHQ1	71	60.277	Meleagris_gallopavo
ENSORLG00015021040	shq1	78	60.092	ENSMAUG00000022030	Shq1	76	59.954	Mesocricetus_auratus
ENSORLG00015021040	shq1	78	58.257	ENSMICG00000009224	SHQ1	74	58.102	Microcebus_murinus
ENSORLG00015021040	shq1	78	59.633	ENSMOCG00000017836	Shq1	76	59.491	Microtus_ochrogaster
ENSORLG00015021040	shq1	93	64.880	ENSMMOG00000010569	shq1	92	65.250	Mola_mola
ENSORLG00015021040	shq1	78	56.849	ENSMODG00000003926	SHQ1	78	56.912	Monodelphis_domestica
ENSORLG00015021040	shq1	98	65.306	ENSMALG00000008870	shq1	94	66.195	Monopterus_albus
ENSORLG00015021040	shq1	81	57.965	MGP_CAROLIEiJ_G0028689	Shq1	76	60.185	Mus_caroli
ENSORLG00015021040	shq1	78	60.183	ENSMUSG00000035378	Shq1	76	60.880	Mus_musculus
ENSORLG00015021040	shq1	78	60.183	MGP_PahariEiJ_G0022440	Shq1	76	60.880	Mus_pahari
ENSORLG00015021040	shq1	85	55.761	MGP_SPRETEiJ_G0029717	Shq1	76	60.648	Mus_spretus
ENSORLG00015021040	shq1	78	59.268	ENSMPUG00000017006	SHQ1	73	59.259	Mustela_putorius_furo
ENSORLG00015021040	shq1	70	56.818	ENSMLUG00000013539	SHQ1	73	57.254	Myotis_lucifugus
ENSORLG00015021040	shq1	92	47.276	ENSNGAG00000023317	Shq1	75	52.719	Nannospalax_galili
ENSORLG00015021040	shq1	82	60.594	ENSNBRG00000024004	shq1	98	61.386	Neolamprologus_brichardi
ENSORLG00015021040	shq1	84	56.468	ENSNLEG00000002731	SHQ1	74	60.185	Nomascus_leucogenys
ENSORLG00015021040	shq1	68	54.630	ENSMEUG00000009350	-	70	54.630	Notamacropus_eugenii
ENSORLG00015021040	shq1	78	59.310	ENSODEG00000009192	SHQ1	79	59.491	Octodon_degus
ENSORLG00015021040	shq1	99	63.987	ENSONIG00000020264	shq1	99	64.657	Oreochromis_niloticus
ENSORLG00015021040	shq1	74	60.817	ENSOCUG00000016695	SHQ1	74	60.739	Oryctolagus_cuniculus
ENSORLG00015021040	shq1	100	96.898	ENSORLG00000023538	shq1	100	96.898	Oryzias_latipes
ENSORLG00015021040	shq1	100	96.383	ENSORLG00020003697	shq1	100	96.383	Oryzias_latipes_hni
ENSORLG00015021040	shq1	99	87.928	ENSOMEG00000001225	shq1	100	86.667	Oryzias_melastigma
ENSORLG00015021040	shq1	84	56.108	ENSOGAG00000003898	SHQ1	76	58.945	Otolemur_garnettii
ENSORLG00015021040	shq1	80	58.444	ENSOARG00000009547	SHQ1	75	59.174	Ovis_aries
ENSORLG00015021040	shq1	74	60.482	ENSPPAG00000027714	SHQ1	74	60.417	Pan_paniscus
ENSORLG00015021040	shq1	84	41.633	ENSPPAG00000043263	-	72	43.458	Pan_paniscus
ENSORLG00015021040	shq1	74	59.759	ENSPPRG00000004769	SHQ1	75	59.722	Panthera_pardus
ENSORLG00015021040	shq1	74	56.585	ENSPTIG00000011478	SHQ1	74	56.674	Panthera_tigris_altaica
ENSORLG00015021040	shq1	84	41.344	ENSPTRG00000048303	-	72	43.124	Pan_troglodytes
ENSORLG00015021040	shq1	74	60.482	ENSPTRG00000015106	SHQ1	74	60.417	Pan_troglodytes
ENSORLG00015021040	shq1	74	59.036	ENSPANG00000002881	SHQ1	74	60.185	Papio_anubis
ENSORLG00015021040	shq1	77	68.409	ENSPKIG00000021517	shq1	72	68.382	Paramormyrops_kingsleyae
ENSORLG00015021040	shq1	80	58.797	ENSPSIG00000005536	SHQ1	71	59.353	Pelodiscus_sinensis
ENSORLG00015021040	shq1	79	69.284	ENSPMGG00000008838	shq1	97	58.596	Periophthalmus_magnuspinnatus
ENSORLG00015021040	shq1	71	60.553	ENSPEMG00000000251	Shq1	76	59.954	Peromyscus_maniculatus_bairdii
ENSORLG00015021040	shq1	79	56.982	ENSPMAG00000005372	shq1	94	59.615	Petromyzon_marinus
ENSORLG00015021040	shq1	94	68.750	ENSPFOG00000003118	shq1	97	70.076	Poecilia_formosa
ENSORLG00015021040	shq1	79	66.441	ENSPMEG00000011076	shq1	98	67.640	Poecilia_mexicana
ENSORLG00015021040	shq1	86	67.432	ENSPREG00000000591	shq1	92	67.850	Poecilia_reticulata
ENSORLG00015021040	shq1	74	60.482	ENSPPYG00000013717	SHQ1	74	60.417	Pongo_abelii
ENSORLG00015021040	shq1	75	59.905	ENSPCAG00000009035	SHQ1	75	60.046	Procavia_capensis
ENSORLG00015021040	shq1	74	57.554	ENSPCOG00000008415	SHQ1	74	59.217	Propithecus_coquereli
ENSORLG00015021040	shq1	74	58.413	ENSPVAG00000017392	SHQ1	75	60.046	Pteropus_vampyrus
ENSORLG00015021040	shq1	99	64.154	ENSPNYG00000003878	shq1	99	64.657	Pundamilia_nyererei
ENSORLG00015021040	shq1	77	67.916	ENSPNAG00000026840	shq1	87	59.150	Pygocentrus_nattereri
ENSORLG00015021040	shq1	78	59.268	ENSRNOG00000005433	Shq1	71	60.185	Rattus_norvegicus
ENSORLG00015021040	shq1	74	58.477	ENSRBIG00000026280	SHQ1	74	58.491	Rhinopithecus_bieti
ENSORLG00015021040	shq1	74	61.205	ENSRROG00000034126	SHQ1	75	61.111	Rhinopithecus_roxellana
ENSORLG00015021040	shq1	74	53.253	ENSSBOG00000021038	SHQ1	73	53.472	Saimiri_boliviensis_boliviensis
ENSORLG00015021040	shq1	78	58.314	ENSSHAG00000015077	SHQ1	77	58.430	Sarcophilus_harrisii
ENSORLG00015021040	shq1	78	71.729	ENSSFOG00015016241	shq1	74	71.921	Scleropages_formosus
ENSORLG00015021040	shq1	92	69.476	ENSSMAG00000016151	shq1	99	64.226	Scophthalmus_maximus
ENSORLG00015021040	shq1	99	64.638	ENSSDUG00000011986	shq1	99	65.139	Seriola_dumerili
ENSORLG00015021040	shq1	99	64.570	ENSSLDG00000013908	shq1	99	65.289	Seriola_lalandi_dorsalis
ENSORLG00015021040	shq1	61	57.185	ENSSARG00000007119	SHQ1	60	57.185	Sorex_araneus
ENSORLG00015021040	shq1	64	56.825	ENSSPUG00000011526	-	61	57.798	Sphenodon_punctatus
ENSORLG00015021040	shq1	81	56.159	ENSSSCG00000011518	SHQ1	74	60.508	Sus_scrofa
ENSORLG00015021040	shq1	74	61.005	ENSTGUG00000009933	SHQ1	75	60.690	Taeniopygia_guttata
ENSORLG00015021040	shq1	98	60.690	ENSTRUG00000009446	shq1	99	61.207	Takifugu_rubripes
ENSORLG00015021040	shq1	74	69.856	ENSTNIG00000007354	shq1	94	69.725	Tetraodon_nigroviridis
ENSORLG00015021040	shq1	57	70.213	ENSTBEG00000011295	SHQ1	52	70.213	Tupaia_belangeri
ENSORLG00015021040	shq1	79	57.432	ENSTTRG00000005320	SHQ1	75	59.353	Tursiops_truncatus
ENSORLG00015021040	shq1	78	58.411	ENSUMAG00000024031	SHQ1	74	59.338	Ursus_maritimus
ENSORLG00015021040	shq1	55	58.333	ENSVPAG00000004880	SHQ1	72	51.562	Vicugna_pacos
ENSORLG00015021040	shq1	71	59.296	ENSVVUG00000013906	SHQ1	74	59.491	Vulpes_vulpes
ENSORLG00015021040	shq1	78	58.065	ENSXETG00000032215	shq1	67	58.151	Xenopus_tropicalis