EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015021354 (Gene tree)
Gene ID: -
Gene Symbol: rpusd1
Alias: -
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 3106 bases
Position: chr8:18600317-18603422
Accession: ZDB-GENE-060929-444
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015020243	PseudoU_synth_2	PF00849.22	1.5e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015035924	-	2229	-	ENSORLP00015020243	304 (aa)	-	-

Gene Model

Click here to download ENSORLG00015021354's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015021354's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015021354	rpusd1	99	57.143	ENSG00000007376	RPUSD1	99	68.862	Homo_sapiens
ENSORLG00015021354	rpusd1	100	74.919	ENSAPOG00000022221	rpusd1	100	75.649	Acanthochromis_polyacanthus
ENSORLG00015021354	rpusd1	99	58.746	ENSAMEG00000007461	RPUSD1	99	58.746	Ailuropoda_melanoleuca
ENSORLG00015021354	rpusd1	99	75.962	ENSACIG00000015863	rpusd1	100	78.387	Amphilophus_citrinellus
ENSORLG00015021354	rpusd1	100	73.955	ENSAOCG00000021975	rpusd1	97	75.484	Amphiprion_ocellaris
ENSORLG00015021354	rpusd1	100	74.277	ENSAPEG00000001316	rpusd1	97	75.806	Amphiprion_percula
ENSORLG00015021354	rpusd1	100	76.452	ENSATEG00000002984	rpusd1	100	77.742	Anabas_testudineus
ENSORLG00015021354	rpusd1	77	59.583	ENSAPLG00000012316	RPUSD1	98	59.583	Anas_platyrhynchos
ENSORLG00015021354	rpusd1	98	62.416	ENSACAG00000008953	RPUSD1	99	62.416	Anolis_carolinensis
ENSORLG00015021354	rpusd1	99	56.494	ENSANAG00000024709	RPUSD1	99	56.494	Aotus_nancymaae
ENSORLG00015021354	rpusd1	99	76.206	ENSACLG00000013692	rpusd1	100	77.170	Astatotilapia_calliptera
ENSORLG00015021354	rpusd1	99	69.000	ENSAMXG00000019802	rpusd1	99	69.000	Astyanax_mexicanus
ENSORLG00015021354	rpusd1	99	59.539	ENSBTAG00000000179	RPUSD1	99	59.539	Bos_taurus
ENSORLG00015021354	rpusd1	99	55.844	ENSCJAG00000012253	RPUSD1	99	55.949	Callithrix_jacchus
ENSORLG00015021354	rpusd1	99	57.285	ENSCAFG00000019614	RPUSD1	99	57.616	Canis_familiaris
ENSORLG00015021354	rpusd1	99	57.285	ENSCAFG00020008891	RPUSD1	99	57.616	Canis_lupus_dingo
ENSORLG00015021354	rpusd1	99	59.871	ENSCHIG00000012872	RPUSD1	99	59.871	Capra_hircus
ENSORLG00015021354	rpusd1	99	56.954	ENSTSYG00000036934	RPUSD1	91	66.387	Carlito_syrichta
ENSORLG00015021354	rpusd1	99	56.954	ENSCAPG00000014219	RPUSD1	99	56.954	Cavia_aperea
ENSORLG00015021354	rpusd1	99	56.954	ENSCPOG00000034604	RPUSD1	99	56.954	Cavia_porcellus
ENSORLG00015021354	rpusd1	99	56.494	ENSCCAG00000034385	RPUSD1	99	56.494	Cebus_capucinus
ENSORLG00015021354	rpusd1	99	56.494	ENSCATG00000042983	RPUSD1	99	56.494	Cercocebus_atys
ENSORLG00015021354	rpusd1	99	56.291	ENSCLAG00000013966	RPUSD1	99	56.026	Chinchilla_lanigera
ENSORLG00015021354	rpusd1	99	56.169	ENSCSAG00000012121	RPUSD1	99	56.169	Chlorocebus_sabaeus
ENSORLG00015021354	rpusd1	98	60.797	ENSCPBG00000021101	RPUSD1	99	60.797	Chrysemys_picta_bellii
ENSORLG00015021354	rpusd1	87	61.509	ENSCANG00000028576	RPUSD1	94	61.509	Colobus_angolensis_palliatus
ENSORLG00015021354	rpusd1	99	56.954	ENSCGRG00001014253	Rpusd1	99	56.954	Cricetulus_griseus_chok1gshd
ENSORLG00015021354	rpusd1	99	56.954	ENSCGRG00000017995	Rpusd1	99	56.954	Cricetulus_griseus_crigri
ENSORLG00015021354	rpusd1	99	75.333	ENSCSEG00000018512	rpusd1	99	75.333	Cynoglossus_semilaevis
ENSORLG00015021354	rpusd1	99	77.303	ENSCVAG00000022746	rpusd1	100	77.303	Cyprinodon_variegatus
ENSORLG00015021354	rpusd1	99	67.333	ENSDARG00000060192	rpusd1	99	67.333	Danio_rerio
ENSORLG00015021354	rpusd1	99	55.921	ENSDNOG00000003721	RPUSD1	99	55.921	Dasypus_novemcinctus
ENSORLG00015021354	rpusd1	99	57.616	ENSDORG00000026656	Rpusd1	99	57.616	Dipodomys_ordii
ENSORLG00015021354	rpusd1	97	48.065	ENSEBUG00000008767	rpusd1	93	48.065	Eptatretus_burgeri
ENSORLG00015021354	rpusd1	99	56.410	ENSEASG00005018421	RPUSD1	75	56.410	Equus_asinus_asinus
ENSORLG00015021354	rpusd1	99	68.852	ENSELUG00000014307	rpusd1	89	68.852	Esox_lucius
ENSORLG00015021354	rpusd1	99	57.426	ENSFCAG00000010359	RPUSD1	99	57.426	Felis_catus
ENSORLG00015021354	rpusd1	99	63.333	ENSFALG00000003211	RPUSD1	99	63.333	Ficedula_albicollis
ENSORLG00015021354	rpusd1	99	57.003	ENSFDAG00000013398	RPUSD1	99	57.003	Fukomys_damarensis
ENSORLG00015021354	rpusd1	99	73.941	ENSFHEG00000004736	rpusd1	100	75.570	Fundulus_heteroclitus
ENSORLG00015021354	rpusd1	99	70.820	ENSGMOG00000010756	rpusd1	99	71.475	Gadus_morhua
ENSORLG00015021354	rpusd1	99	63.816	ENSGALG00000005315	RPUSD1	99	63.816	Gallus_gallus
ENSORLG00015021354	rpusd1	99	76.393	ENSGAFG00000009886	rpusd1	100	76.393	Gambusia_affinis
ENSORLG00015021354	rpusd1	99	73.786	ENSGACG00000014276	rpusd1	100	74.757	Gasterosteus_aculeatus
ENSORLG00015021354	rpusd1	98	60.133	ENSGAGG00000004181	RPUSD1	99	60.133	Gopherus_agassizii
ENSORLG00015021354	rpusd1	99	57.792	ENSGGOG00000013997	RPUSD1	99	57.792	Gorilla_gorilla
ENSORLG00015021354	rpusd1	99	76.527	ENSHBUG00000023728	rpusd1	100	77.492	Haplochromis_burtoni
ENSORLG00015021354	rpusd1	99	56.291	ENSHGLG00000002595	RPUSD1	99	56.026	Heterocephalus_glaber_female
ENSORLG00015021354	rpusd1	99	56.291	ENSHGLG00100014303	RPUSD1	99	56.026	Heterocephalus_glaber_male
ENSORLG00015021354	rpusd1	99	70.492	ENSHCOG00000002390	rpusd1	99	70.805	Hippocampus_comes
ENSORLG00015021354	rpusd1	98	67.550	ENSIPUG00000001570	rpusd1	99	67.550	Ictalurus_punctatus
ENSORLG00015021354	rpusd1	99	57.616	ENSSTOG00000004276	RPUSD1	99	57.616	Ictidomys_tridecemlineatus
ENSORLG00015021354	rpusd1	99	56.954	ENSJJAG00000015696	Rpusd1	99	56.954	Jaculus_jaculus
ENSORLG00015021354	rpusd1	100	78.033	ENSKMAG00000017287	rpusd1	100	78.105	Kryptolebias_marmoratus
ENSORLG00015021354	rpusd1	100	74.516	ENSLBEG00000013354	RPUSD1	100	75.161	Labrus_bergylta
ENSORLG00015021354	rpusd1	100	74.516	ENSLBEG00000022502	rpusd1	100	75.161	Labrus_bergylta
ENSORLG00015021354	rpusd1	99	62.951	ENSLACG00000008869	RPUSD1	99	62.951	Latimeria_chalumnae
ENSORLG00015021354	rpusd1	70	77.570	ENSLOCG00000005682	rpusd1	99	77.570	Lepisosteus_oculatus
ENSORLG00015021354	rpusd1	99	55.960	ENSLAFG00000002115	RPUSD1	99	55.960	Loxodonta_africana
ENSORLG00015021354	rpusd1	99	56.494	ENSMFAG00000003961	RPUSD1	99	56.494	Macaca_fascicularis
ENSORLG00015021354	rpusd1	99	56.494	ENSMMUG00000000842	RPUSD1	99	56.494	Macaca_mulatta
ENSORLG00015021354	rpusd1	99	56.494	ENSMNEG00000042712	RPUSD1	99	56.494	Macaca_nemestrina
ENSORLG00015021354	rpusd1	99	56.494	ENSMLEG00000030591	RPUSD1	99	56.494	Mandrillus_leucophaeus
ENSORLG00015021354	rpusd1	100	76.849	ENSMAMG00000004735	rpusd1	100	77.492	Mastacembelus_armatus
ENSORLG00015021354	rpusd1	99	76.206	ENSMZEG00005003214	rpusd1	100	77.170	Maylandia_zebra
ENSORLG00015021354	rpusd1	97	64.094	ENSMGAG00000005447	RPUSD1	99	64.094	Meleagris_gallopavo
ENSORLG00015021354	rpusd1	83	56.126	ENSMAUG00000019998	Rpusd1	96	56.126	Mesocricetus_auratus
ENSORLG00015021354	rpusd1	99	57.096	ENSMICG00000017561	RPUSD1	99	57.426	Microcebus_murinus
ENSORLG00015021354	rpusd1	99	57.616	ENSMOCG00000014082	Rpusd1	99	57.616	Microtus_ochrogaster
ENSORLG00015021354	rpusd1	99	70.724	ENSMMOG00000012569	rpusd1	99	71.895	Mola_mola
ENSORLG00015021354	rpusd1	99	61.842	ENSMODG00000016882	RPUSD1	99	61.842	Monodelphis_domestica
ENSORLG00015021354	rpusd1	100	76.206	ENSMALG00000017818	rpusd1	100	76.206	Monopterus_albus
ENSORLG00015021354	rpusd1	99	56.623	MGP_CAROLIEiJ_G0021244	Rpusd1	99	56.623	Mus_caroli
ENSORLG00015021354	rpusd1	99	57.285	ENSMUSG00000041199	Rpusd1	99	57.285	Mus_musculus
ENSORLG00015021354	rpusd1	99	56.579	MGP_PahariEiJ_G0023562	Rpusd1	99	56.579	Mus_pahari
ENSORLG00015021354	rpusd1	99	57.285	MGP_SPRETEiJ_G0022155	Rpusd1	99	57.285	Mus_spretus
ENSORLG00015021354	rpusd1	97	56.229	ENSMPUG00000015897	RPUSD1	97	57.383	Mustela_putorius_furo
ENSORLG00015021354	rpusd1	99	56.270	ENSMLUG00000001089	RPUSD1	99	56.270	Myotis_lucifugus
ENSORLG00015021354	rpusd1	99	56.623	ENSNGAG00000003595	Rpusd1	99	56.623	Nannospalax_galili
ENSORLG00015021354	rpusd1	99	76.471	ENSNBRG00000006457	rpusd1	100	76.471	Neolamprologus_brichardi
ENSORLG00015021354	rpusd1	54	48.256	ENSNLEG00000008424	-	98	48.256	Nomascus_leucogenys
ENSORLG00015021354	rpusd1	99	61.667	ENSMEUG00000016049	RPUSD1	99	61.667	Notamacropus_eugenii
ENSORLG00015021354	rpusd1	99	52.318	ENSOPRG00000008340	RPUSD1	99	52.318	Ochotona_princeps
ENSORLG00015021354	rpusd1	99	55.700	ENSODEG00000016945	RPUSD1	99	55.700	Octodon_degus
ENSORLG00015021354	rpusd1	99	76.948	ENSONIG00000015672	rpusd1	100	76.948	Oreochromis_niloticus
ENSORLG00015021354	rpusd1	100	98.355	ENSORLG00000013009	rpusd1	100	98.355	Oryzias_latipes
ENSORLG00015021354	rpusd1	100	98.026	ENSORLG00020010382	rpusd1	100	98.026	Oryzias_latipes_hni
ENSORLG00015021354	rpusd1	100	88.158	ENSOMEG00000021426	rpusd1	100	88.158	Oryzias_melastigma
ENSORLG00015021354	rpusd1	99	56.169	ENSOGAG00000003795	RPUSD1	99	56.169	Otolemur_garnettii
ENSORLG00015021354	rpusd1	99	60.261	ENSOARG00000014254	RPUSD1	99	60.261	Ovis_aries
ENSORLG00015021354	rpusd1	99	57.792	ENSPPAG00000034797	RPUSD1	99	57.792	Pan_paniscus
ENSORLG00015021354	rpusd1	99	57.426	ENSPPRG00000012389	RPUSD1	99	57.426	Panthera_pardus
ENSORLG00015021354	rpusd1	99	57.049	ENSPTIG00000008545	RPUSD1	92	57.049	Panthera_tigris_altaica
ENSORLG00015021354	rpusd1	99	57.792	ENSPTRG00000007565	RPUSD1	99	57.792	Pan_troglodytes
ENSORLG00015021354	rpusd1	99	56.494	ENSPANG00000024401	RPUSD1	99	56.494	Papio_anubis
ENSORLG00015021354	rpusd1	99	66.776	ENSPKIG00000018890	rpusd1	91	66.776	Paramormyrops_kingsleyae
ENSORLG00015021354	rpusd1	99	62.583	ENSPSIG00000013945	RPUSD1	99	62.583	Pelodiscus_sinensis
ENSORLG00015021354	rpusd1	99	70.432	ENSPMGG00000014950	rpusd1	99	70.432	Periophthalmus_magnuspinnatus
ENSORLG00015021354	rpusd1	99	56.954	ENSPEMG00000000497	Rpusd1	99	56.954	Peromyscus_maniculatus_bairdii
ENSORLG00015021354	rpusd1	99	52.769	ENSPMAG00000001563	rpusd1	99	52.443	Petromyzon_marinus
ENSORLG00015021354	rpusd1	99	63.072	ENSPCIG00000021216	-	93	63.072	Phascolarctos_cinereus
ENSORLG00015021354	rpusd1	99	76.238	ENSPFOG00000007946	rpusd1	100	76.238	Poecilia_formosa
ENSORLG00015021354	rpusd1	99	76.238	ENSPLAG00000011925	rpusd1	100	76.238	Poecilia_latipinna
ENSORLG00015021354	rpusd1	99	76.238	ENSPMEG00000002910	rpusd1	100	76.238	Poecilia_mexicana
ENSORLG00015021354	rpusd1	99	76.974	ENSPREG00000019851	rpusd1	100	76.974	Poecilia_reticulata
ENSORLG00015021354	rpusd1	99	43.709	ENSPCAG00000002258	RPUSD1	99	43.709	Procavia_capensis
ENSORLG00015021354	rpusd1	99	55.519	ENSPCOG00000022582	RPUSD1	99	55.519	Propithecus_coquereli
ENSORLG00015021354	rpusd1	99	52.597	ENSPVAG00000013104	RPUSD1	99	52.597	Pteropus_vampyrus
ENSORLG00015021354	rpusd1	99	76.527	ENSPNYG00000024076	rpusd1	100	77.492	Pundamilia_nyererei
ENSORLG00015021354	rpusd1	99	67.000	ENSPNAG00000013806	rpusd1	99	67.000	Pygocentrus_nattereri
ENSORLG00015021354	rpusd1	99	57.285	ENSRNOG00000023639	Rpusd1	99	57.285	Rattus_norvegicus
ENSORLG00015021354	rpusd1	99	57.143	ENSRBIG00000030238	RPUSD1	99	57.143	Rhinopithecus_bieti
ENSORLG00015021354	rpusd1	99	57.143	ENSRROG00000036663	RPUSD1	99	57.143	Rhinopithecus_roxellana
ENSORLG00015021354	rpusd1	99	57.616	ENSSBOG00000033063	RPUSD1	99	57.947	Saimiri_boliviensis_boliviensis
ENSORLG00015021354	rpusd1	99	62.333	ENSSHAG00000013500	RPUSD1	99	62.333	Sarcophilus_harrisii
ENSORLG00015021354	rpusd1	98	69.231	ENSSFOG00015014394	rpusd1	99	69.231	Scleropages_formosus
ENSORLG00015021354	rpusd1	99	76.699	ENSSMAG00000008045	rpusd1	93	76.699	Scophthalmus_maximus
ENSORLG00015021354	rpusd1	85	84.170	ENSSDUG00000001829	rpusd1	97	77.742	Seriola_dumerili
ENSORLG00015021354	rpusd1	85	84.170	ENSSLDG00000020853	rpusd1	97	77.742	Seriola_lalandi_dorsalis
ENSORLG00015021354	rpusd1	54	71.856	ENSSARG00000011187	-	100	71.856	Sorex_araneus
ENSORLG00015021354	rpusd1	62	55.556	ENSSPUG00000005119	-	99	55.556	Sphenodon_punctatus
ENSORLG00015021354	rpusd1	100	77.742	ENSSPAG00000012708	rpusd1	100	77.742	Stegastes_partitus
ENSORLG00015021354	rpusd1	99	57.188	ENSSSCG00000008000	RPUSD1	98	64.961	Sus_scrofa
ENSORLG00015021354	rpusd1	83	67.729	ENSTGUG00000015375	RPUSD1	99	67.729	Taeniopygia_guttata
ENSORLG00015021354	rpusd1	100	74.359	ENSTRUG00000003041	rpusd1	99	74.359	Takifugu_rubripes
ENSORLG00015021354	rpusd1	98	69.565	ENSTNIG00000002660	rpusd1	99	69.565	Tetraodon_nigroviridis
ENSORLG00015021354	rpusd1	99	57.468	ENSTTRG00000010167	RPUSD1	99	57.468	Tursiops_truncatus
ENSORLG00015021354	rpusd1	99	58.086	ENSUAMG00000012736	RPUSD1	99	58.416	Ursus_americanus
ENSORLG00015021354	rpusd1	99	58.086	ENSUMAG00000021174	RPUSD1	99	58.416	Ursus_maritimus
ENSORLG00015021354	rpusd1	99	57.947	ENSVVUG00000012357	RPUSD1	99	57.947	Vulpes_vulpes
ENSORLG00015021354	rpusd1	99	63.667	ENSXETG00000007184	rpusd1	99	63.667	Xenopus_tropicalis
ENSORLG00015021354	rpusd1	99	76.393	ENSXCOG00000017930	rpusd1	100	76.393	Xiphophorus_couchianus
ENSORLG00015021354	rpusd1	99	77.049	ENSXMAG00000024084	rpusd1	100	77.049	Xiphophorus_maculatus