EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015021365 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-32e23.4
Alias: -
Full Name: si:dkey-32e23.4
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 8676 bases
Position: chr9:17124746-17133421
Accession: ZDB-GENE-081105-41
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015035032	MMR_HSR1	PF01926.23	2.7e-06	1	1
ENSORLP00015020224	MMR_HSR1	PF01926.23	3.2e-06	1	1
ENSORLP00015020189	MMR_HSR1	PF01926.23	3.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015029383	-	4937	-	ENSORLP00015020224	698 (aa)	-	-
ENSORLT00015035908	-	4932	-	ENSORLP00015035032	660 (aa)	-	-
ENSORLT00015029316	-	2025	-	ENSORLP00015020189	674 (aa)	-	-

Gene Model

Click here to download ENSORLG00015021365's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015021365's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015021365	si:dkey-32e23.4	100	69.539	ENSORLG00015001039	-	100	69.539
ENSORLG00015021365	si:dkey-32e23.4	100	69.385	ENSORLG00015009298	dnm1l	100	69.385

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015021365	si:dkey-32e23.4	100	89.848	ENSCVAG00000010346	si:dkey-32e23.4	100	89.848	Cyprinodon_variegatus
ENSORLG00015021365	si:dkey-32e23.4	100	85.455	ENSELUG00000017713	si:dkey-32e23.4	100	85.455	Esox_lucius
ENSORLG00015021365	si:dkey-32e23.4	100	90.000	ENSFHEG00000019298	si:dkey-32e23.4	100	90.000	Fundulus_heteroclitus
ENSORLG00015021365	si:dkey-32e23.4	100	76.946	ENSGMOG00000005670	si:dkey-32e23.4	100	76.946	Gadus_morhua
ENSORLG00015021365	si:dkey-32e23.4	100	88.939	ENSHCOG00000018024	si:dkey-32e23.4	100	88.939	Hippocampus_comes
ENSORLG00015021365	si:dkey-32e23.4	100	86.082	ENSIPUG00000007113	si:dkey-32e23.4	100	86.082	Ictalurus_punctatus
ENSORLG00015021365	si:dkey-32e23.4	100	90.303	ENSLBEG00000004848	si:dkey-32e23.4	100	90.303	Labrus_bergylta
ENSORLG00015021365	si:dkey-32e23.4	100	91.212	ENSMALG00000006625	si:dkey-32e23.4	100	91.212	Monopterus_albus
ENSORLG00015021365	si:dkey-32e23.4	100	99.242	ENSORLG00000011119	si:dkey-32e23.4	97	99.242	Oryzias_latipes
ENSORLG00015021365	si:dkey-32e23.4	100	99.140	ENSORLG00020006829	si:dkey-32e23.4	100	99.140	Oryzias_latipes_hni
ENSORLG00015021365	si:dkey-32e23.4	100	95.697	ENSOMEG00000009143	si:dkey-32e23.4	100	95.697	Oryzias_melastigma
ENSORLG00015021365	si:dkey-32e23.4	100	90.152	ENSPLAG00000023009	si:dkey-32e23.4	100	90.152	Poecilia_latipinna
ENSORLG00015021365	si:dkey-32e23.4	100	90.152	ENSPMEG00000009231	si:dkey-32e23.4	100	90.152	Poecilia_mexicana
ENSORLG00015021365	si:dkey-32e23.4	100	84.115	ENSPNAG00000020681	si:dkey-32e23.4	100	84.115	Pygocentrus_nattereri
ENSORLG00015021365	si:dkey-32e23.4	100	90.606	ENSSMAG00000007121	si:dkey-32e23.4	96	90.606	Scophthalmus_maximus
ENSORLG00015021365	si:dkey-32e23.4	100	90.000	ENSSDUG00000019756	si:dkey-32e23.4	100	90.000	Seriola_dumerili
ENSORLG00015021365	si:dkey-32e23.4	100	89.394	ENSSPAG00000011027	si:dkey-32e23.4	100	89.394	Stegastes_partitus