EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015021388 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 6391 bases
Position: chr15:12733033-12739423
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015020268	zf-C2H2	PF00096.26	9.2e-27	1	5
ENSORLP00015020268	zf-C2H2	PF00096.26	9.2e-27	2	5
ENSORLP00015020268	zf-C2H2	PF00096.26	9.2e-27	3	5
ENSORLP00015020268	zf-C2H2	PF00096.26	9.2e-27	4	5
ENSORLP00015020268	zf-C2H2	PF00096.26	9.2e-27	5	5
ENSORLP00015035052	zf-C2H2	PF00096.26	9.2e-27	1	5
ENSORLP00015035052	zf-C2H2	PF00096.26	9.2e-27	2	5
ENSORLP00015035052	zf-C2H2	PF00096.26	9.2e-27	3	5
ENSORLP00015035052	zf-C2H2	PF00096.26	9.2e-27	4	5
ENSORLP00015035052	zf-C2H2	PF00096.26	9.2e-27	5	5
ENSORLP00015020268	zf-met	PF12874.7	7.2e-05	1	1
ENSORLP00015035052	zf-met	PF12874.7	7.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015035934	-	2079	-	ENSORLP00015035052	466 (aa)	-	-
ENSORLT00015029418	-	2350	-	ENSORLP00015020268	466 (aa)	-	-

Gene Model

Click here to download ENSORLG00015021388's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015021388's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015021388	-	70	30.108	ENSORLG00015012062	-	71	30.636
ENSORLG00015021388	-	67	31.655	ENSORLG00015011171	-	64	31.655
ENSORLG00015021388	-	67	30.909	ENSORLG00015007128	-	94	30.909
ENSORLG00015021388	-	74	30.542	ENSORLG00015013093	-	53	30.542
ENSORLG00015021388	-	67	30.120	ENSORLG00015008496	-	91	31.461
ENSORLG00015021388	-	71	34.545	ENSORLG00015008733	znf646	61	32.751
ENSORLG00015021388	-	77	30.097	ENSORLG00015018258	-	90	30.097
ENSORLG00015021388	-	75	33.645	ENSORLG00015015776	-	90	31.000
ENSORLG00015021388	-	66	35.354	ENSORLG00015022210	zbtb17	52	35.354

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015021388	-	100	71.702	ENSGAFG00000005031	-	100	71.822	Gambusia_affinis
ENSORLG00015021388	-	100	99.785	ENSORLG00000026680	-	100	99.785	Oryzias_latipes
ENSORLG00015021388	-	100	99.356	ENSORLG00020015911	-	100	99.356	Oryzias_latipes_hni
ENSORLG00015021388	-	100	71.338	ENSPFOG00000005622	-	100	71.125	Poecilia_formosa
ENSORLG00015021388	-	100	71.338	ENSPLAG00000018358	-	100	71.125	Poecilia_latipinna
ENSORLG00015021388	-	100	71.125	ENSPMEG00000017903	-	100	70.913	Poecilia_mexicana
ENSORLG00015021388	-	73	31.707	ENSXCOG00000003001	-	83	31.707	Xiphophorus_couchianus